RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 RIMS2Q9UQ26 1411 aa22.76■■□□□ 1.23
POLR2J3-218ENST00000513506 TXNDC2Q86VQ3 553 aa22.76■■□□□ 1.23
POLR2J3-218ENST00000513506 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
POLR2J3-218ENST00000513506 KIF1BO60333 1816 aa22.72■■□□□ 1.23
POLR2J3-218ENST00000513506 NPHP4O75161 1426 aaPredicted RBP22.72■■□□□ 1.23
POLR2J3-218ENST00000513506 PLEKHG1Q9ULL1 1385 aa22.71■■□□□ 1.23
POLR2J3-218ENST00000513506 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
POLR2J3-218ENST00000513506 POLR1AO95602 1720 aaPredicted RBP22.7■■□□□ 1.22
POLR2J3-218ENST00000513506 MYO5BQ9ULV0 1848 aa22.7■■□□□ 1.22
POLR2J3-218ENST00000513506 STAC3Q96MF2 364 aa22.69■■□□□ 1.22
POLR2J3-218ENST00000513506 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
POLR2J3-218ENST00000513506 VGFO15240 615 aaPredicted RBP22.67■■□□□ 1.22
POLR2J3-218ENST00000513506 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
POLR2J3-218ENST00000513506 TBX22Q9Y458 520 aa22.63■■□□□ 1.21
POLR2J3-218ENST00000513506 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
POLR2J3-218ENST00000513506 RGL3Q3MIN7 710 aa22.62■■□□□ 1.21
POLR2J3-218ENST00000513506 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
POLR2J3-218ENST00000513506 SETBP1Q9Y6X0 1596 aa22.62■■□□□ 1.21
POLR2J3-218ENST00000513506 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
POLR2J3-218ENST00000513506 MYOM2P54296 1465 aa22.6■■□□□ 1.21
POLR2J3-218ENST00000513506 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
POLR2J3-218ENST00000513506 PPLO60437 1756 aa22.59■■□□□ 1.21
POLR2J3-218ENST00000513506 IFT172Q9UG01 1749 aa22.58■■□□□ 1.21
POLR2J3-218ENST00000513506 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
POLR2J3-218ENST00000513506 PIK3R4Q99570 1358 aa22.58■■□□□ 1.21
POLR2J3-218ENST00000513506 DIP2AQ14689 1571 aa22.57■■□□□ 1.2
POLR2J3-218ENST00000513506 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
POLR2J3-218ENST00000513506 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
POLR2J3-218ENST00000513506 NRXN3Q9Y4C0 1643 aa22.55■■□□□ 1.2
POLR2J3-218ENST00000513506 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
POLR2J3-218ENST00000513506 SLC26A8Q96RN1 970 aa22.53■■□□□ 1.2
POLR2J3-218ENST00000513506 LTBP4Q8N2S1 1624 aa22.52■■□□□ 1.2
POLR2J3-218ENST00000513506 KCNA6P17658 529 aa22.5■■□□□ 1.19
POLR2J3-218ENST00000513506 DCAF11Q8TEB1 546 aa22.5■■□□□ 1.19
POLR2J3-218ENST00000513506 L3MBTL2Q969R5 705 aa22.5■■□□□ 1.19
POLR2J3-218ENST00000513506 C14orf93Q9H972 538 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-218ENST00000513506 TIMELESSQ9UNS1 1208 aa22.5■■□□□ 1.19
POLR2J3-218ENST00000513506 ZNF335Q9H4Z2 1342 aaPredicted RBP22.5■■□□□ 1.19
POLR2J3-218ENST00000513506 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
POLR2J3-218ENST00000513506 ALKQ9UM73 1620 aa22.48■■□□□ 1.19
POLR2J3-218ENST00000513506 NEUROD1Q13562 356 aa22.47■■□□□ 1.19
POLR2J3-218ENST00000513506 METP08581 1390 aa22.47■■□□□ 1.19
POLR2J3-218ENST00000513506 CPS1P31327 1500 aa22.47■■□□□ 1.19
POLR2J3-218ENST00000513506 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
POLR2J3-218ENST00000513506 BCANQ96GW7 911 aa22.46■■□□□ 1.19
POLR2J3-218ENST00000513506 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.18
POLR2J3-218ENST00000513506 NKTRP30414 1462 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-218ENST00000513506 PTPRUQ92729 1446 aa22.43■■□□□ 1.18
POLR2J3-218ENST00000513506 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
POLR2J3-218ENST00000513506 IQSEC2Q5JU85 1478 aa22.41■■□□□ 1.18
POLR2J3-218ENST00000513506 KDM2AQ9Y2K7 1162 aa22.41■■□□□ 1.18
POLR2J3-218ENST00000513506 CHD2O14647 1828 aaKnown RBP22.41■■□□□ 1.18
POLR2J3-218ENST00000513506 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
POLR2J3-218ENST00000513506 LAMC1P11047 1609 aa22.39■■□□□ 1.18
POLR2J3-218ENST00000513506 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
POLR2J3-218ENST00000513506 AMOTL2Q9Y2J4 779 aa22.39■■□□□ 1.17
POLR2J3-218ENST00000513506 TECPR2O15040 1411 aa22.39■■□□□ 1.17
POLR2J3-218ENST00000513506 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
POLR2J3-218ENST00000513506 ABCC11Q96J66 1382 aa22.38■■□□□ 1.17
POLR2J3-218ENST00000513506 STRCP1A6NGW2 1772 aa22.38■■□□□ 1.17
POLR2J3-218ENST00000513506 SIRT1Q96EB6 747 aa22.38■■□□□ 1.17
POLR2J3-218ENST00000513506 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
POLR2J3-218ENST00000513506 ASXL1Q8IXJ9 1541 aa22.37■■□□□ 1.17
POLR2J3-218ENST00000513506 LRRC7Q96NW7 1537 aa22.37■■□□□ 1.17
POLR2J3-218ENST00000513506 CERKQ8TCT0 537 aa22.37■■□□□ 1.17
POLR2J3-218ENST00000513506 ADGRB1O14514 1584 aa22.37■■□□□ 1.17
POLR2J3-218ENST00000513506 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
POLR2J3-218ENST00000513506 PTCH1Q13635 1447 aa22.36■■□□□ 1.17
POLR2J3-218ENST00000513506 KIAA1210Q9ULL0 1709 aa22.34■■□□□ 1.17
POLR2J3-218ENST00000513506 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
POLR2J3-218ENST00000513506 YTHDC2Q9H6S0 1430 aaKnown RBP22.32■■□□□ 1.16
POLR2J3-218ENST00000513506 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
POLR2J3-218ENST00000513506 NBPF8Q3BBV2 869 aa22.3■■□□□ 1.16
POLR2J3-218ENST00000513506 PROSER2Q86WR7 435 aaPredicted RBP22.3■■□□□ 1.16
POLR2J3-218ENST00000513506 FAM135BQ49AJ0 1406 aa22.3■■□□□ 1.16
POLR2J3-218ENST00000513506 TMEM94Q12767 1356 aa22.29■■□□□ 1.16
POLR2J3-218ENST00000513506 GPRASP1Q5JY77 1395 aa22.29■■□□□ 1.16
POLR2J3-218ENST00000513506 ROBO2Q9HCK4 1378 aa22.29■■□□□ 1.16
POLR2J3-218ENST00000513506 DLC1Q96QB1 1528 aa22.28■■□□□ 1.16
POLR2J3-218ENST00000513506 NBPF1Q3BBV0 1214 aa22.26■■□□□ 1.15
POLR2J3-218ENST00000513506 KNDC1Q76NI1 1749 aa22.25■■□□□ 1.15
POLR2J3-218ENST00000513506 TRPM1Q7Z4N2 1603 aa22.23■■□□□ 1.15
POLR2J3-218ENST00000513506 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
POLR2J3-218ENST00000513506 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
POLR2J3-218ENST00000513506 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
POLR2J3-218ENST00000513506 DCCP43146 1447 aa22.22■■□□□ 1.15
POLR2J3-218ENST00000513506 STK26Q9P289 416 aa22.2■■□□□ 1.14
POLR2J3-218ENST00000513506 ADGRL3Q9HAR2 1447 aa22.2■■□□□ 1.14
POLR2J3-218ENST00000513506 ROCK2O75116 1388 aaKnown RBP22.17■■□□□ 1.14
POLR2J3-218ENST00000513506 MSH6P52701 1360 aa22.16■■□□□ 1.14
POLR2J3-218ENST00000513506 WAPLQ7Z5K2 1190 aa22.16■■□□□ 1.14
POLR2J3-218ENST00000513506 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
POLR2J3-218ENST00000513506 TRAK1Q9UPV9 953 aa22.16■■□□□ 1.14
POLR2J3-218ENST00000513506 PLEKHH1Q9ULM0 1364 aa22.15■■□□□ 1.14
POLR2J3-218ENST00000513506 CADPS2Q86UW7 1296 aa22.14■■□□□ 1.13
POLR2J3-218ENST00000513506 PRAM1Q96QH2 718 aa22.14■■□□□ 1.13
POLR2J3-218ENST00000513506 TOM1O60784 492 aa22.13■■□□□ 1.13
POLR2J3-218ENST00000513506 FBXO41Q8TF61 875 aa22.11■■□□□ 1.13
POLR2J3-218ENST00000513506 ARHGEF28Q8N1W1 1705 aaKnown RBP22.09■■□□□ 1.13
POLR2J3-218ENST00000513506 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms