RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 MROH1Q8NDA8 1641 aa15.67■□□□□ 0.1
CLCN3-208ENST00000512813 CEP152O94986 1710 aa15.66■□□□□ 0.1
CLCN3-208ENST00000512813 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
CLCN3-208ENST00000512813 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.65■□□□□ 0.1
CLCN3-208ENST00000512813 CFAP65Q6ZU64 1925 aaKnown RBP15.65■□□□□ 0.1
CLCN3-208ENST00000512813 CHD2O14647 1828 aaKnown RBP15.65■□□□□ 0.1
CLCN3-208ENST00000512813 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
CLCN3-208ENST00000512813 YY1P25490 414 aa15.64■□□□□ 0.09
CLCN3-208ENST00000512813 EIF2AK4Q9P2K8 1649 aaKnown RBP15.64■□□□□ 0.09
CLCN3-208ENST00000512813 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
CLCN3-208ENST00000512813 BLMP54132 1417 aaPredicted RBP15.62■□□□□ 0.09
CLCN3-208ENST00000512813 ARHGAP31Q2M1Z3 1444 aa15.62■□□□□ 0.09
CLCN3-208ENST00000512813 BRINP3Q76B58 766 aa15.62■□□□□ 0.09
CLCN3-208ENST00000512813 ASXL1Q8IXJ9 1541 aa15.61■□□□□ 0.09
CLCN3-208ENST00000512813 BCL9LQ86UU0 1499 aa15.6■□□□□ 0.09
CLCN3-208ENST00000512813 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
CLCN3-208ENST00000512813 ATRNO75882 1429 aa15.6■□□□□ 0.09
CLCN3-208ENST00000512813 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
CLCN3-208ENST00000512813 ATF3P18847 181 aa15.57■□□□□ 0.08
CLCN3-208ENST00000512813 HRCP23327 699 aa15.57■□□□□ 0.08
CLCN3-208ENST00000512813 LRRC59Q96AG4 307 aaKnown RBP15.57■□□□□ 0.08
CLCN3-208ENST00000512813 C19orf44Q9H6X5 657 aa15.57■□□□□ 0.08
CLCN3-208ENST00000512813 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
CLCN3-208ENST00000512813 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
CLCN3-208ENST00000512813 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
CLCN3-208ENST00000512813 USP21Q9UK80 565 aa15.56■□□□□ 0.08
CLCN3-208ENST00000512813 DCCP43146 1447 aa15.54■□□□□ 0.08
CLCN3-208ENST00000512813 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
CLCN3-208ENST00000512813 DEFB132Q7Z7B7 95 aa15.54■□□□□ 0.08
CLCN3-208ENST00000512813 UNC13BO14795 1591 aa15.53■□□□□ 0.08
CLCN3-208ENST00000512813 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
CLCN3-208ENST00000512813 ADGRB3O60242 1522 aa15.53■□□□□ 0.08
CLCN3-208ENST00000512813 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
CLCN3-208ENST00000512813 FNBP4Q8N3X1 1017 aaPredicted RBP15.52■□□□□ 0.08
CLCN3-208ENST00000512813 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
CLCN3-208ENST00000512813 PLEKHG1Q9ULL1 1385 aa15.51■□□□□ 0.07
CLCN3-208ENST00000512813 PSDA5PKW4 1024 aaPredicted RBP15.51■□□□□ 0.07
CLCN3-208ENST00000512813 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
CLCN3-208ENST00000512813 PTCH1Q13635 1447 aa15.5■□□□□ 0.07
CLCN3-208ENST00000512813 BCANQ96GW7 911 aa15.49■□□□□ 0.07
CLCN3-208ENST00000512813 MST1RQ04912 1400 aa15.49■□□□□ 0.07
CLCN3-208ENST00000512813 IDI1Q13907 227 aa15.48■□□□□ 0.07
CLCN3-208ENST00000512813 ZFYVE9O95405 1425 aa15.47■□□□□ 0.07
CLCN3-208ENST00000512813 SF3B2Q13435 895 aaKnown RBP15.47■□□□□ 0.07
CLCN3-208ENST00000512813 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
CLCN3-208ENST00000512813 CEP162Q5TB80 1403 aa15.46■□□□□ 0.07
CLCN3-208ENST00000512813 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
CLCN3-208ENST00000512813 TSPY4P0CV99 314 aa15.45■□□□□ 0.06
CLCN3-208ENST00000512813 TSPY10P0CW01 314 aa15.45■□□□□ 0.06
CLCN3-208ENST00000512813 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
CLCN3-208ENST00000512813 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
CLCN3-208ENST00000512813 PIK3R4Q99570 1358 aa15.44■□□□□ 0.06
CLCN3-208ENST00000512813 LAMC1P11047 1609 aa15.43■□□□□ 0.06
CLCN3-208ENST00000512813 COL22A1Q8NFW1 1626 aaPredicted RBP15.42■□□□□ 0.06
CLCN3-208ENST00000512813 DUOX2Q9NRD8 1548 aa15.42■□□□□ 0.06
CLCN3-208ENST00000512813 BRWD3Q6RI45 1802 aa15.41■□□□□ 0.06
CLCN3-208ENST00000512813 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.41■□□□□ 0.06
CLCN3-208ENST00000512813 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
CLCN3-208ENST00000512813 NOS1P29475 1434 aa15.41■□□□□ 0.06
CLCN3-208ENST00000512813 ADAMTS13Q76LX8 1427 aa15.41■□□□□ 0.06
CLCN3-208ENST00000512813 TRPM2O94759 1503 aa15.4■□□□□ 0.06
CLCN3-208ENST00000512813 DDX17Q92841 729 aaKnown RBP15.4■□□□□ 0.06
CLCN3-208ENST00000512813 GLI3P10071 1580 aa15.4■□□□□ 0.06
CLCN3-208ENST00000512813 LMTK2Q8IWU2 1503 aa15.38■□□□□ 0.05
CLCN3-208ENST00000512813 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
CLCN3-208ENST00000512813 RIMS2Q9UQ26 1411 aa15.38■□□□□ 0.05
CLCN3-208ENST00000512813 PPP1R15AO75807 674 aaPredicted RBP15.38■□□□□ 0.05
CLCN3-208ENST00000512813 MYOM2P54296 1465 aa15.37■□□□□ 0.05
CLCN3-208ENST00000512813 RALGAPBQ86X10 1494 aa15.37■□□□□ 0.05
CLCN3-208ENST00000512813 BAG6P46379 1132 aa15.36■□□□□ 0.05
CLCN3-208ENST00000512813 MYO5BQ9ULV0 1848 aa15.36■□□□□ 0.05
CLCN3-208ENST00000512813 XRN1Q8IZH2 1706 aaKnown RBP15.35■□□□□ 0.05
CLCN3-208ENST00000512813 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
CLCN3-208ENST00000512813 ERBINQ96RT1 1412 aa15.34■□□□□ 0.05
CLCN3-208ENST00000512813 R3HDM1Q15032 1099 aaKnown RBP15.34■□□□□ 0.05
CLCN3-208ENST00000512813 SOS2Q07890 1332 aaPredicted RBP15.34■□□□□ 0.05
CLCN3-208ENST00000512813 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
CLCN3-208ENST00000512813 GCC2Q8IWJ2 1684 aa15.33■□□□□ 0.04
CLCN3-208ENST00000512813 HDGFP51858 240 aaKnown RBP15.33■□□□□ 0.04
CLCN3-208ENST00000512813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.04
CLCN3-208ENST00000512813 ZNF784Q8NCA9 323 aaPredicted RBP15.32■□□□□ 0.04
CLCN3-208ENST00000512813 AMOTL2Q9Y2J4 779 aa15.32■□□□□ 0.04
CLCN3-208ENST00000512813 KANK1Q14678 1352 aa15.32■□□□□ 0.04
CLCN3-208ENST00000512813 ADGRL3Q9HAR2 1447 aa15.32■□□□□ 0.04
CLCN3-208ENST00000512813 CEP350Q5VT06 3117 aa15.32■□□□□ 0.04
CLCN3-208ENST00000512813 TMEM131LA2VDJ0 1609 aa15.32■□□□□ 0.04
CLCN3-208ENST00000512813 C1QTNF8P60827 252 aa15.31■□□□□ 0.04
CLCN3-208ENST00000512813 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
CLCN3-208ENST00000512813 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
CLCN3-208ENST00000512813 NALCNQ8IZF0 1738 aa15.29■□□□□ 0.04
CLCN3-208ENST00000512813 SLIT2O94813 1529 aa15.28■□□□□ 0.04
CLCN3-208ENST00000512813 C1orf167Q5SNV9 1468 aa15.28■□□□□ 0.04
CLCN3-208ENST00000512813 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLCN3-208ENST00000512813 RGPD1P0DJD0 1748 aa15.28■□□□□ 0.04
CLCN3-208ENST00000512813 DISP2A7MBM2 1401 aa15.27■□□□□ 0.04
CLCN3-208ENST00000512813 KIF15Q9NS87 1388 aa15.27■□□□□ 0.04
CLCN3-208ENST00000512813 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.04
CLCN3-208ENST00000512813 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.04
CLCN3-208ENST00000512813 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
CLCN3-208ENST00000512813 KRT27Q7Z3Y8 459 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms