RNA–Protein interactions for RNA: ENST00000512596.5

TRIM60-204, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM60, Length 1,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-204ENST00000512596 MTA1Q13330 715 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 SASS6Q6UVJ0 657 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 RNF217Q8TC41 542 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 ITFG2Q969R8 447 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
TRIM60-204ENST00000512596 SIRT1Q96EB6 747 aa11.65□□□□□ -0.54
TRIM60-204ENST00000512596 MRVI1Q9Y6F6 885 aa11.65□□□□□ -0.54
TRIM60-204ENST00000512596 KIF3CO14782 793 aa11.64□□□□□ -0.55
TRIM60-204ENST00000512596 RINLQ6ZS11 566 aa11.64□□□□□ -0.55
TRIM60-204ENST00000512596 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
TRIM60-204ENST00000512596 ANKRD23Q86SG2 305 aa11.63□□□□□ -0.55
TRIM60-204ENST00000512596 BAZ1AQ9NRL2 1556 aaPredicted RBP11.63□□□□□ -0.55
TRIM60-204ENST00000512596 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
TRIM60-204ENST00000512596 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
TRIM60-204ENST00000512596 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
TRIM60-204ENST00000512596 ZNF771Q7L3S4 317 aaPredicted RBP11.63□□□□□ -0.55
TRIM60-204ENST00000512596 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
TRIM60-204ENST00000512596 BECN1Q14457 450 aa11.62□□□□□ -0.55
TRIM60-204ENST00000512596 EXOC8Q8IYI6 725 aa11.62□□□□□ -0.55
TRIM60-204ENST00000512596 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
TRIM60-204ENST00000512596 MED4Q9NPJ6 270 aa11.62□□□□□ -0.55
TRIM60-204ENST00000512596 ZNF853P0CG23 659 aa11.61□□□□□ -0.55
TRIM60-204ENST00000512596 MCM5P33992 734 aa11.61□□□□□ -0.55
TRIM60-204ENST00000512596 GTF2A1P52655 376 aaPredicted RBP11.61□□□□□ -0.55
TRIM60-204ENST00000512596 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM60-204ENST00000512596 FEZ1Q99689 392 aa11.61□□□□□ -0.55
TRIM60-204ENST00000512596 MRC2Q9UBG0 1479 aa11.61□□□□□ -0.55
TRIM60-204ENST00000512596 CHMP4CQ96CF2 233 aa11.61□□□□□ -0.55
TRIM60-204ENST00000512596 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
TRIM60-204ENST00000512596 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
TRIM60-204ENST00000512596 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
TRIM60-204ENST00000512596 PPP1R9BQ96SB3 815 aa11.6□□□□□ -0.55
TRIM60-204ENST00000512596 PAIP2Q9BPZ3 127 aaKnown RBP11.6□□□□□ -0.55
TRIM60-204ENST00000512596 GRPEL1Q9HAV7 217 aa11.6□□□□□ -0.55
TRIM60-204ENST00000512596 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
TRIM60-204ENST00000512596 CAPN2P17655 700 aa11.59□□□□□ -0.55
TRIM60-204ENST00000512596 FEZ2Q9UHY8 353 aaPredicted RBP11.59□□□□□ -0.55
TRIM60-204ENST00000512596 DHX57Q6P158 1386 aaKnown RBP11.59□□□□□ -0.55
TRIM60-204ENST00000512596 SGSM3Q96HU1 749 aa11.59□□□□□ -0.55
TRIM60-204ENST00000512596 TSPAN18Q96SJ8 248 aa11.59□□□□□ -0.55
TRIM60-204ENST00000512596 PANK2Q9BZ23 570 aa11.59□□□□□ -0.55
TRIM60-204ENST00000512596 R3HCC1Q9Y3T6 440 aaKnown RBP11.59□□□□□ -0.55
TRIM60-204ENST00000512596 SMG6Q86US8 1419 aaKnown RBP11.58□□□□□ -0.55
TRIM60-204ENST00000512596 MPNDQ8N594 471 aa11.58□□□□□ -0.56
TRIM60-204ENST00000512596 NEFHP12036 1026 aa11.57□□□□□ -0.56
TRIM60-204ENST00000512596 GUCY2CP25092 1073 aa11.57□□□□□ -0.56
TRIM60-204ENST00000512596 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIM60-204ENST00000512596 TNNT3P45378 269 aaPredicted RBP11.57□□□□□ -0.56
TRIM60-204ENST00000512596 NOP2P46087 812 aaKnown RBP11.57□□□□□ -0.56
TRIM60-204ENST00000512596 ICE2Q659A1 982 aa11.57□□□□□ -0.56
TRIM60-204ENST00000512596 FAM9BQ8IZU0 186 aa11.57□□□□□ -0.56
TRIM60-204ENST00000512596 TDO2P48775 406 aa11.57□□□□□ -0.56
TRIM60-204ENST00000512596 FAM177A1Q8N128 213 aaPredicted RBP11.57□□□□□ -0.56
TRIM60-204ENST00000512596 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
TRIM60-204ENST00000512596 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
TRIM60-204ENST00000512596 WDR62O43379 1518 aa11.56□□□□□ -0.56
TRIM60-204ENST00000512596 KLHL33A6NCF5 533 aa11.56□□□□□ -0.56
TRIM60-204ENST00000512596 PPP1R12AO14974 1030 aaPredicted RBP11.56□□□□□ -0.56
TRIM60-204ENST00000512596 LIG1P18858 919 aa11.56□□□□□ -0.56
TRIM60-204ENST00000512596 CBX1P83916 185 aa11.56□□□□□ -0.56
TRIM60-204ENST00000512596 TRDNQ13061 729 aa11.56□□□□□ -0.56
TRIM60-204ENST00000512596 SWT1Q5T5J6 900 aaKnown RBP11.56□□□□□ -0.56
TRIM60-204ENST00000512596 EP400NLQ6ZTU2 488 aa11.55□□□□□ -0.56
TRIM60-204ENST00000512596 IGF1RP08069 1367 aa11.55□□□□□ -0.56
TRIM60-204ENST00000512596 HMGN5P82970 282 aaKnown RBP11.55□□□□□ -0.56
TRIM60-204ENST00000512596 ZNF513Q8N8E2 541 aaPredicted RBP11.55□□□□□ -0.56
TRIM60-204ENST00000512596 PRIMPOLQ96LW4 560 aa11.55□□□□□ -0.56
TRIM60-204ENST00000512596 SCAPERQ9BY12 1400 aa11.54□□□□□ -0.56
TRIM60-204ENST00000512596 MYRIPQ8NFW9 859 aa11.54□□□□□ -0.56
TRIM60-204ENST00000512596 STK26Q9P289 416 aa11.54□□□□□ -0.56
TRIM60-204ENST00000512596 IBTKQ9P2D0 1353 aaPredicted RBP11.54□□□□□ -0.56
TRIM60-204ENST00000512596 CTAGE5O15320 804 aa11.53□□□□□ -0.56
TRIM60-204ENST00000512596 RPAINQ86UA6 219 aa11.53□□□□□ -0.56
TRIM60-204ENST00000512596 MSL3Q8N5Y2 521 aaKnown RBP11.53□□□□□ -0.56
TRIM60-204ENST00000512596 JMYQ8N9B5 988 aa11.53□□□□□ -0.56
TRIM60-204ENST00000512596 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
TRIM60-204ENST00000512596 RBM25P49756 843 aaKnown RBP11.52□□□□□ -0.57
TRIM60-204ENST00000512596 C11orf91Q3C1V1 193 aa11.52□□□□□ -0.57
TRIM60-204ENST00000512596 BORCS6Q96GS4 357 aa11.52□□□□□ -0.57
TRIM60-204ENST00000512596 OGFRQ9NZT2 677 aa11.52□□□□□ -0.57
TRIM60-204ENST00000512596 MYBPC2Q14324 1141 aa11.51□□□□□ -0.57
TRIM60-204ENST00000512596 PDCL2Q8N4E4 241 aa11.51□□□□□ -0.57
TRIM60-204ENST00000512596 NOL7Q9UMY1 257 aaKnown RBP11.51□□□□□ -0.57
TRIM60-204ENST00000512596 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
TRIM60-204ENST00000512596 NUB1Q9Y5A7 615 aa11.51□□□□□ -0.57
TRIM60-204ENST00000512596 PAXBP1Q9Y5B6 917 aa11.51□□□□□ -0.57
TRIM60-204ENST00000512596 MPHOSPH10O00566 681 aaKnown RBP11.5□□□□□ -0.57
TRIM60-204ENST00000512596 DHX16O60231 1041 aaKnown RBP11.5□□□□□ -0.57
TRIM60-204ENST00000512596 COQ9O75208 318 aa11.5□□□□□ -0.57
TRIM60-204ENST00000512596 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
TRIM60-204ENST00000512596 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
TRIM60-204ENST00000512596 UPF2Q9HAU5 1272 aaKnown RBP11.5□□□□□ -0.57
TRIM60-204ENST00000512596 CCDC189A1A4V9 331 aa11.49□□□□□ -0.57
TRIM60-204ENST00000512596 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
TRIM60-204ENST00000512596 ATP2B3Q16720 1220 aa11.49□□□□□ -0.57
TRIM60-204ENST00000512596 LRCH2Q5VUJ6 765 aa11.49□□□□□ -0.57
TRIM60-204ENST00000512596 SDR16C5Q8N3Y7 309 aa11.49□□□□□ -0.57
TRIM60-204ENST00000512596 CEP164Q9UPV0 1460 aa11.49□□□□□ -0.57
TRIM60-204ENST00000512596 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
TRIM60-204ENST00000512596 ZC3H12AQ5D1E8 599 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms