RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 STAC3Q96MF2 364 aa14.32□□□□□ -0.12
PDGFRA-210ENST00000512522 TMEM131LA2VDJ0 1609 aa14.3□□□□□ -0.12
PDGFRA-210ENST00000512522 CEBPAP49715 358 aaPredicted RBP14.3□□□□□ -0.12
PDGFRA-210ENST00000512522 TNRQ92752 1358 aa14.3□□□□□ -0.12
PDGFRA-210ENST00000512522 RPGRIP1LQ68CZ1 1315 aa14.29□□□□□ -0.12
PDGFRA-210ENST00000512522 IFT172Q9UG01 1749 aa14.29□□□□□ -0.12
PDGFRA-210ENST00000512522 RIMS1Q86UR5 1692 aaKnown RBP14.28□□□□□ -0.12
PDGFRA-210ENST00000512522 PRAG1Q86YV5 1406 aa14.28□□□□□ -0.12
PDGFRA-210ENST00000512522 MYOM2P54296 1465 aa14.27□□□□□ -0.12
PDGFRA-210ENST00000512522 KDM2AQ9Y2K7 1162 aa14.27□□□□□ -0.13
PDGFRA-210ENST00000512522 A2ML1A8K2U0 1454 aa14.26□□□□□ -0.13
PDGFRA-210ENST00000512522 NLRP1Q9C000 1473 aa14.26□□□□□ -0.13
PDGFRA-210ENST00000512522 NRXN1Q9ULB1 1477 aa14.26□□□□□ -0.13
PDGFRA-210ENST00000512522 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
PDGFRA-210ENST00000512522 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
PDGFRA-210ENST00000512522 PPLO60437 1756 aa14.25□□□□□ -0.13
PDGFRA-210ENST00000512522 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
PDGFRA-210ENST00000512522 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
PDGFRA-210ENST00000512522 ZFYVE9O95405 1425 aa14.24□□□□□ -0.13
PDGFRA-210ENST00000512522 RALGAPBQ86X10 1494 aa14.24□□□□□ -0.13
PDGFRA-210ENST00000512522 ADGRF5Q8IZF2 1346 aa14.22□□□□□ -0.13
PDGFRA-210ENST00000512522 SETD1BQ9UPS6 1966 aaKnown RBP14.22□□□□□ -0.13
PDGFRA-210ENST00000512522 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
PDGFRA-210ENST00000512522 PTPRMP28827 1452 aa14.22□□□□□ -0.13
PDGFRA-210ENST00000512522 TRPM1Q7Z4N2 1603 aa14.22□□□□□ -0.13
PDGFRA-210ENST00000512522 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
PDGFRA-210ENST00000512522 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.13
PDGFRA-210ENST00000512522 KIAA1210Q9ULL0 1709 aa14.19□□□□□ -0.14
PDGFRA-210ENST00000512522 PIK3C2GO75747 1445 aa14.19□□□□□ -0.14
PDGFRA-210ENST00000512522 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
PDGFRA-210ENST00000512522 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
PDGFRA-210ENST00000512522 MYO3AQ8NEV4 1616 aa14.19□□□□□ -0.14
PDGFRA-210ENST00000512522 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
PDGFRA-210ENST00000512522 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
PDGFRA-210ENST00000512522 NBPF1Q3BBV0 1214 aa14.18□□□□□ -0.14
PDGFRA-210ENST00000512522 RIMS2Q9UQ26 1411 aa14.17□□□□□ -0.14
PDGFRA-210ENST00000512522 LAMC1P11047 1609 aa14.17□□□□□ -0.14
PDGFRA-210ENST00000512522 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
PDGFRA-210ENST00000512522 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
PDGFRA-210ENST00000512522 C14orf93Q9H972 538 aaKnown RBP14.16□□□□□ -0.14
PDGFRA-210ENST00000512522 SLIT1O75093 1534 aa14.15□□□□□ -0.14
PDGFRA-210ENST00000512522 CEP170BQ9Y4F5 1589 aaPredicted RBP14.15□□□□□ -0.14
PDGFRA-210ENST00000512522 ROCK2O75116 1388 aaKnown RBP14.15□□□□□ -0.14
PDGFRA-210ENST00000512522 ZNF142P52746 1687 aaPredicted RBP14.14□□□□□ -0.15
PDGFRA-210ENST00000512522 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
PDGFRA-210ENST00000512522 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDGFRA-210ENST00000512522 CFAP70Q5T0N1 1121 aa14.14□□□□□ -0.15
PDGFRA-210ENST00000512522 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDGFRA-210ENST00000512522 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
PDGFRA-210ENST00000512522 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
PDGFRA-210ENST00000512522 THEMISQ8N1K5 641 aaPredicted RBP14.13□□□□□ -0.15
PDGFRA-210ENST00000512522 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
PDGFRA-210ENST00000512522 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
PDGFRA-210ENST00000512522 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
PDGFRA-210ENST00000512522 USP47Q96K76 1375 aa14.11□□□□□ -0.15
PDGFRA-210ENST00000512522 LTKP29376 864 aa14.11□□□□□ -0.15
PDGFRA-210ENST00000512522 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
PDGFRA-210ENST00000512522 NRXN3Q9Y4C0 1643 aa14.09□□□□□ -0.15
PDGFRA-210ENST00000512522 HIRIP3Q9BW71 556 aaPredicted RBP14.09□□□□□ -0.15
PDGFRA-210ENST00000512522 IQGAP1P46940 1657 aa14.09□□□□□ -0.15
PDGFRA-210ENST00000512522 ALKQ9UM73 1620 aa14.08□□□□□ -0.15
PDGFRA-210ENST00000512522 SCAF11Q99590 1463 aaKnown RBP14.08□□□□□ -0.16
PDGFRA-210ENST00000512522 PLEKHG1Q9ULL1 1385 aa14.08□□□□□ -0.16
PDGFRA-210ENST00000512522 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
PDGFRA-210ENST00000512522 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
PDGFRA-210ENST00000512522 TXNDC2Q86VQ3 553 aa14.07□□□□□ -0.16
PDGFRA-210ENST00000512522 MED14O60244 1454 aa14.06□□□□□ -0.16
PDGFRA-210ENST00000512522 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
PDGFRA-210ENST00000512522 U3KPZ7 1027 aaPredicted RBP14.06□□□□□ -0.16
PDGFRA-210ENST00000512522 ADAMTS13Q76LX8 1427 aa14.06□□□□□ -0.16
PDGFRA-210ENST00000512522 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
PDGFRA-210ENST00000512522 TMEM132EQ6IEE7 984 aa14.05□□□□□ -0.16
PDGFRA-210ENST00000512522 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
PDGFRA-210ENST00000512522 TESK2Q96S53 571 aa14.04□□□□□ -0.16
PDGFRA-210ENST00000512522 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.17
PDGFRA-210ENST00000512522 YTHDC2Q9H6S0 1430 aaKnown RBP14.01□□□□□ -0.17
PDGFRA-210ENST00000512522 METP08581 1390 aa14.01□□□□□ -0.17
PDGFRA-210ENST00000512522 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
PDGFRA-210ENST00000512522 TBX22Q9Y458 520 aa14.01□□□□□ -0.17
PDGFRA-210ENST00000512522 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
PDGFRA-210ENST00000512522 EIF3AQ14152 1382 aaKnown RBP13.99□□□□□ -0.17
PDGFRA-210ENST00000512522 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
PDGFRA-210ENST00000512522 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
PDGFRA-210ENST00000512522 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
PDGFRA-210ENST00000512522 DIP2AQ14689 1571 aa13.99□□□□□ -0.17
PDGFRA-210ENST00000512522 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
PDGFRA-210ENST00000512522 CCDC7Q96M83 1385 aa13.98□□□□□ -0.17
PDGFRA-210ENST00000512522 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
PDGFRA-210ENST00000512522 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
PDGFRA-210ENST00000512522 LMTK3Q96Q04 1460 aa13.98□□□□□ -0.17
PDGFRA-210ENST00000512522 ARHGEF28Q8N1W1 1705 aaKnown RBP13.98□□□□□ -0.17
PDGFRA-210ENST00000512522 TECPR2O15040 1411 aa13.98□□□□□ -0.17
PDGFRA-210ENST00000512522 SIRT1Q96EB6 747 aa13.97□□□□□ -0.17
PDGFRA-210ENST00000512522 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
PDGFRA-210ENST00000512522 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
PDGFRA-210ENST00000512522 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
PDGFRA-210ENST00000512522 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
PDGFRA-210ENST00000512522 BCANQ96GW7 911 aa13.95□□□□□ -0.18
PDGFRA-210ENST00000512522 STK26Q9P289 416 aa13.95□□□□□ -0.18
PDGFRA-210ENST00000512522 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms