RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SPDYE2BA6NHP3 402 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 SPDYE5A6NIY4 337 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 SPDYE6P0CI01 402 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 SPDYE2Q495Y8 402 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 C9orf131Q5VYM1 1079 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 PMM1Q92871 262 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 MAP2K5Q13163 448 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 GRIPAP1Q4V328 841 aa8.56□□□□□ -1.04
TRAPPC11-209ENST00000512476 PAX3P23760 479 aa8.55□□□□□ -1.04
TRAPPC11-209ENST00000512476 LNPKQ9C0E8 428 aa8.55□□□□□ -1.04
TRAPPC11-209ENST00000512476 RB1CC1Q8TDY2 1594 aa8.55□□□□□ -1.04
TRAPPC11-209ENST00000512476 PSME1Q06323 249 aa8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 ABL2P42684 1182 aa8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 RBM10P98175 930 aaKnown RBP8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 NLGN1Q8N2Q7 840 aa8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 MTMR14Q8NCE2 650 aa8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 ATP1B4Q9UN42 357 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 RPS6KL1Q9Y6S9 549 aa8.54□□□□□ -1.04
TRAPPC11-209ENST00000512476 SPACA7Q96KW9 195 aa8.53□□□□□ -1.04
TRAPPC11-209ENST00000512476 PNMA2Q9UL42 364 aa8.53□□□□□ -1.04
TRAPPC11-209ENST00000512476 SECISBP2LQ93073 1101 aaKnown RBP8.52□□□□□ -1.05
TRAPPC11-209ENST00000512476 C7P10643 843 aa8.51□□□□□ -1.05
TRAPPC11-209ENST00000512476 PHLDB3Q6NSJ2 640 aa8.51□□□□□ -1.05
TRAPPC11-209ENST00000512476 TBC1D2BQ9UPU7 963 aa8.51□□□□□ -1.05
TRAPPC11-209ENST00000512476 KAT6BQ8WYB5 2073 aa8.51□□□□□ -1.05
TRAPPC11-209ENST00000512476 CCDC194A0A1B0GVG4 234 aa8.51□□□□□ -1.05
TRAPPC11-209ENST00000512476 EGFLAMQ63HQ2 1017 aa8.51□□□□□ -1.05
TRAPPC11-209ENST00000512476 SCRIBQ14160 1630 aa8.51□□□□□ -1.05
TRAPPC11-209ENST00000512476 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
TRAPPC11-209ENST00000512476 HDGFL1Q5TGJ6 251 aa8.5□□□□□ -1.05
TRAPPC11-209ENST00000512476 NPAS4Q8IUM7 802 aa8.5□□□□□ -1.05
TRAPPC11-209ENST00000512476 MORC4Q8TE76 937 aa8.5□□□□□ -1.05
TRAPPC11-209ENST00000512476 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRAPPC11-209ENST00000512476 PIF1Q9H611 641 aa8.5□□□□□ -1.05
TRAPPC11-209ENST00000512476 CREB3O43889 395 aa8.49□□□□□ -1.05
TRAPPC11-209ENST00000512476 DHX38Q92620 1227 aaKnown RBP8.49□□□□□ -1.05
TRAPPC11-209ENST00000512476 SCNN1AP37088 669 aa8.48□□□□□ -1.05
TRAPPC11-209ENST00000512476 SPOCK3Q9BQ16 436 aa8.48□□□□□ -1.05
TRAPPC11-209ENST00000512476 CHRM1P11229 460 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC11-209ENST00000512476 CAMK2BQ13554 666 aa8.47□□□□□ -1.05
TRAPPC11-209ENST00000512476 SF3A1Q15459 793 aaKnown RBP8.47□□□□□ -1.05
TRAPPC11-209ENST00000512476 TSNAXIP1Q2TAA8 658 aa8.47□□□□□ -1.05
TRAPPC11-209ENST00000512476 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
TRAPPC11-209ENST00000512476 CHPF2Q9P2E5 772 aa8.47□□□□□ -1.05
TRAPPC11-209ENST00000512476 FARP1Q9Y4F1 1045 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC11-209ENST00000512476 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.05
TRAPPC11-209ENST00000512476 RASEFQ8IZ41 740 aa8.46□□□□□ -1.05
TRAPPC11-209ENST00000512476 MCCP23508 829 aa8.46□□□□□ -1.06
TRAPPC11-209ENST00000512476 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 PTPROQ16827 1216 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 CCDC144BQ3MJ40 725 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 PPP1R12CQ9BZL4 782 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 RFC5P40937 340 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 MFSD10Q14728 455 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 ZFYVE27Q5T4F4 411 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 SMC5Q8IY18 1101 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 SSUH2Q9Y2M2 353 aa8.45□□□□□ -1.06
TRAPPC11-209ENST00000512476 hCG_2014768A0A024R1R8 64 aa8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 TLDC2A0PJX2 215 aa8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 NUTM2FA1L443 756 aa8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 ANKRD33BA6NCL7 494 aa8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 DPYSL4O14531 572 aa8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 ERCC5P28715 1186 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 LMOD1P29536 600 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 PDE6BP35913 854 aa8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 DDX27Q96GQ7 796 aaKnown RBP8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 G3BP2Q9UN86 482 aaKnown RBP8.44□□□□□ -1.06
TRAPPC11-209ENST00000512476 IQSEC3Q9UPP2 1182 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC11-209ENST00000512476 TMA7Q9Y2S6 64 aaKnown RBP8.43□□□□□ -1.06
TRAPPC11-209ENST00000512476 TBX22Q9Y458 520 aa8.43□□□□□ -1.06
TRAPPC11-209ENST00000512476 PALM3A6NDB9 673 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC11-209ENST00000512476 SERPINB4P48594 390 aa8.43□□□□□ -1.06
TRAPPC11-209ENST00000512476 KCNB2Q92953 911 aa8.43□□□□□ -1.06
TRAPPC11-209ENST00000512476 SDE2Q6IQ49 451 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 MAMSTRQ6ZN01 415 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 FAM212AQ96EL1 285 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 KIF4AO95239 1232 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 IGBP1P78318 339 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 LONRF3Q496Y0 759 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 FBXO22Q8NEZ5 403 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 CRISPLD2Q9H0B8 497 aa8.42□□□□□ -1.06
TRAPPC11-209ENST00000512476 SH3BP5O60239 455 aa8.41□□□□□ -1.06
TRAPPC11-209ENST00000512476 APLP1P51693 650 aa8.41□□□□□ -1.06
TRAPPC11-209ENST00000512476 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
TRAPPC11-209ENST00000512476 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
TRAPPC11-209ENST00000512476 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
TRAPPC11-209ENST00000512476 GNPATO15228 680 aa8.4□□□□□ -1.06
TRAPPC11-209ENST00000512476 NOP9Q86U38 636 aaKnown RBP8.4□□□□□ -1.07
TRAPPC11-209ENST00000512476 PHOX2BQ99453 314 aa8.4□□□□□ -1.07
TRAPPC11-209ENST00000512476 MTA3Q9BTC8 594 aa8.4□□□□□ -1.07
TRAPPC11-209ENST00000512476 METTL14Q9HCE5 456 aaKnown RBP8.4□□□□□ -1.07
TRAPPC11-209ENST00000512476 NAP1L2Q9ULW6 460 aaPredicted RBP8.4□□□□□ -1.07
TRAPPC11-209ENST00000512476 STAG1Q8WVM7 1258 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 MAF1Q9H063 256 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 SLAIN2Q9P270 581 aa8.39□□□□□ -1.07
TRAPPC11-209ENST00000512476 DMGDHQ9UI17 866 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms