RNA–Protein interactions for RNA: ENST00000512309.1

COPB2-210, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-210ENST00000512309 NUDT18Q6ZVK8 323 aa10.85□□□□□ -0.67
COPB2-210ENST00000512309 WDR70Q9NW82 654 aa10.84□□□□□ -0.67
COPB2-210ENST00000512309 TNFRSF10AO00220 468 aa10.83□□□□□ -0.68
COPB2-210ENST00000512309 ZNF598Q86UK7 904 aaKnown RBP10.83□□□□□ -0.68
COPB2-210ENST00000512309 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
COPB2-210ENST00000512309 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
COPB2-210ENST00000512309 AAASQ9NRG9 546 aa10.81□□□□□ -0.68
COPB2-210ENST00000512309 SWT1Q5T5J6 900 aaKnown RBP10.8□□□□□ -0.68
COPB2-210ENST00000512309 ZNF697Q5TEC3 545 aa10.8□□□□□ -0.68
COPB2-210ENST00000512309 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
COPB2-210ENST00000512309 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
COPB2-210ENST00000512309 PPEF1O14829 653 aaPredicted RBP10.78□□□□□ -0.68
COPB2-210ENST00000512309 LIAT1Q6ZQX7 453 aa10.78□□□□□ -0.68
COPB2-210ENST00000512309 TLL1O43897 1013 aa10.77□□□□□ -0.69
COPB2-210ENST00000512309 GDF9O60383 454 aa10.77□□□□□ -0.69
COPB2-210ENST00000512309 PDIA6Q15084 440 aa10.77□□□□□ -0.69
COPB2-210ENST00000512309 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
COPB2-210ENST00000512309 WFS1O76024 890 aa10.76□□□□□ -0.69
COPB2-210ENST00000512309 CDHR5Q9HBB8 845 aa10.76□□□□□ -0.69
COPB2-210ENST00000512309 STK17AQ9UEE5 414 aa10.76□□□□□ -0.69
COPB2-210ENST00000512309 PCDHB3Q9Y5E6 796 aa10.76□□□□□ -0.69
COPB2-210ENST00000512309 BLOC1S3Q6QNY0 202 aa10.75□□□□□ -0.69
COPB2-210ENST00000512309 ANKLE1Q8NAG6 615 aa10.75□□□□□ -0.69
COPB2-210ENST00000512309 S1PR4O95977 384 aa10.72□□□□□ -0.69
COPB2-210ENST00000512309 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
COPB2-210ENST00000512309 GRXCR2A6NFK2 248 aa10.7□□□□□ -0.7
COPB2-210ENST00000512309 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
COPB2-210ENST00000512309 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
COPB2-210ENST00000512309 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
COPB2-210ENST00000512309 PRKCSHP14314 528 aaPredicted RBP10.68□□□□□ -0.7
COPB2-210ENST00000512309 PRR14Q9BWN1 585 aa10.68□□□□□ -0.7
COPB2-210ENST00000512309 NFX1Q12986 1120 aaKnown RBP10.67□□□□□ -0.7
COPB2-210ENST00000512309 GMPR2Q9P2T1 348 aaKnown RBP10.67□□□□□ -0.7
COPB2-210ENST00000512309 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
COPB2-210ENST00000512309 INSM1Q01101 510 aaPredicted RBP10.66□□□□□ -0.7
COPB2-210ENST00000512309 PADI6Q6TGC4 694 aa10.66□□□□□ -0.7
COPB2-210ENST00000512309 C11orf95C9JLR9 678 aaPredicted RBP10.65□□□□□ -0.7
COPB2-210ENST00000512309 WIPF1O43516 503 aa10.65□□□□□ -0.7
COPB2-210ENST00000512309 PLA2G2CQ5R387 149 aa10.65□□□□□ -0.7
COPB2-210ENST00000512309 FOXC1Q12948 553 aa10.64□□□□□ -0.71
COPB2-210ENST00000512309 TTC13Q8NBP0 860 aa10.64□□□□□ -0.71
COPB2-210ENST00000512309 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
COPB2-210ENST00000512309 LOC100996750A0A140TA64 210 aa10.63□□□□□ -0.71
COPB2-210ENST00000512309 E2F4Q16254 413 aa10.63□□□□□ -0.71
COPB2-210ENST00000512309 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
COPB2-210ENST00000512309 KRTAP4-6Q9BYQ5 205 aa10.63□□□□□ -0.71
COPB2-210ENST00000512309 PKD2L1Q9P0L9 805 aa10.63□□□□□ -0.71
COPB2-210ENST00000512309 OSBPP22059 807 aa10.61□□□□□ -0.71
COPB2-210ENST00000512309 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
COPB2-210ENST00000512309 EYA1Q99502 592 aa10.6□□□□□ -0.71
COPB2-210ENST00000512309 LCE2CQ5TA81 110 aa10.59□□□□□ -0.71
COPB2-210ENST00000512309 AXIN1O15169 862 aa10.58□□□□□ -0.72
COPB2-210ENST00000512309 ADH1BP00325 375 aa10.58□□□□□ -0.72
COPB2-210ENST00000512309 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
COPB2-210ENST00000512309 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
COPB2-210ENST00000512309 AVPP01185 164 aa10.56□□□□□ -0.72
COPB2-210ENST00000512309 LMOD2Q6P5Q4 547 aa10.55□□□□□ -0.72
COPB2-210ENST00000512309 SLC6A16Q9GZN6 736 aa10.55□□□□□ -0.72
COPB2-210ENST00000512309 ACTN4O43707 911 aaKnown RBP10.54□□□□□ -0.72
COPB2-210ENST00000512309 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
COPB2-210ENST00000512309 TOR4AQ9NXH8 423 aa10.53□□□□□ -0.72
COPB2-210ENST00000512309 CFHP08603 1231 aa10.51□□□□□ -0.73
COPB2-210ENST00000512309 CTC1Q2NKJ3 1217 aa10.51□□□□□ -0.73
COPB2-210ENST00000512309 CYP4X1Q8N118 509 aa10.5□□□□□ -0.73
COPB2-210ENST00000512309 NR1I2O75469 434 aa10.49□□□□□ -0.73
COPB2-210ENST00000512309 TERTO14746 1132 aaKnown RBP10.48□□□□□ -0.73
COPB2-210ENST00000512309 SNRPBP14678 240 aaKnown RBP10.48□□□□□ -0.73
COPB2-210ENST00000512309 DNAJB2P25686 324 aa10.48□□□□□ -0.73
COPB2-210ENST00000512309 SMCPP49901 116 aaPredicted RBP10.48□□□□□ -0.73
COPB2-210ENST00000512309 ARIH1Q9Y4X5 557 aaPredicted RBP10.48□□□□□ -0.73
COPB2-210ENST00000512309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.46□□□□□ -0.73
COPB2-210ENST00000512309 TMEM134Q9H6X4 195 aa10.46□□□□□ -0.73
COPB2-210ENST00000512309 RPIAP49247 311 aa10.44□□□□□ -0.74
COPB2-210ENST00000512309 SMYD5Q6GMV2 418 aa10.44□□□□□ -0.74
COPB2-210ENST00000512309 SCUBE3Q8IX30 993 aa10.43□□□□□ -0.74
COPB2-210ENST00000512309 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
COPB2-210ENST00000512309 SEMA3EO15041 775 aa10.42□□□□□ -0.74
COPB2-210ENST00000512309 TESPA1A2RU30 521 aaPredicted RBP10.41□□□□□ -0.74
COPB2-210ENST00000512309 SLC10A3P09131 477 aa10.41□□□□□ -0.74
COPB2-210ENST00000512309 SPSB2Q99619 263 aa10.41□□□□□ -0.74
COPB2-210ENST00000512309 TTC24A2A3L6 582 aaPredicted RBP10.4□□□□□ -0.74
COPB2-210ENST00000512309 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.74
COPB2-210ENST00000512309 PUS10Q3MIT2 529 aaKnown RBP10.4□□□□□ -0.74
COPB2-210ENST00000512309 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
COPB2-210ENST00000512309 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
COPB2-210ENST00000512309 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
COPB2-210ENST00000512309 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
COPB2-210ENST00000512309 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
COPB2-210ENST00000512309 FAM161AQ3B820 660 aa10.36□□□□□ -0.75
COPB2-210ENST00000512309 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
COPB2-210ENST00000512309 SMPD1P17405 629 aa10.35□□□□□ -0.75
COPB2-210ENST00000512309 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
COPB2-210ENST00000512309 LORP23490 312 aaPredicted RBP10.33□□□□□ -0.76
COPB2-210ENST00000512309 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
COPB2-210ENST00000512309 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
COPB2-210ENST00000512309 GMPRP36959 345 aa10.31□□□□□ -0.76
COPB2-210ENST00000512309 PTGDRQ13258 359 aa10.3□□□□□ -0.76
COPB2-210ENST00000512309 J3QL48 77 aa10.29□□□□□ -0.76
COPB2-210ENST00000512309 SNIP1Q8TAD8 396 aaKnown RBP10.29□□□□□ -0.76
COPB2-210ENST00000512309 SLC16A10Q8TF71 515 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms