RNA–Protein interactions for RNA: ENST00000512290.2

MSC-AS1-202, MSC antisense RNA 1, humanhuman

TSL 3

Gene MSC-AS1, Length 832 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-202ENST00000512290 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
MSC-AS1-202ENST00000512290 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
MSC-AS1-202ENST00000512290 ARHGAP33O14559 1287 aa12.63□□□□□ -0.39
MSC-AS1-202ENST00000512290 RIMS1Q86UR5 1692 aaKnown RBP12.62□□□□□ -0.39
MSC-AS1-202ENST00000512290 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
MSC-AS1-202ENST00000512290 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
MSC-AS1-202ENST00000512290 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
MSC-AS1-202ENST00000512290 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
MSC-AS1-202ENST00000512290 PPP4R3BQ5MIZ7 849 aa12.61□□□□□ -0.39
MSC-AS1-202ENST00000512290 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
MSC-AS1-202ENST00000512290 KIAA0556O60303 1618 aa12.61□□□□□ -0.39
MSC-AS1-202ENST00000512290 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
MSC-AS1-202ENST00000512290 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
MSC-AS1-202ENST00000512290 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
MSC-AS1-202ENST00000512290 CEBPAP49715 358 aaPredicted RBP12.57□□□□□ -0.4
MSC-AS1-202ENST00000512290 PSEN2P49810 448 aa12.56□□□□□ -0.4
MSC-AS1-202ENST00000512290 DDX27Q96GQ7 796 aaKnown RBP12.56□□□□□ -0.4
MSC-AS1-202ENST00000512290 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
MSC-AS1-202ENST00000512290 NEO1Q92859 1461 aa12.55□□□□□ -0.4
MSC-AS1-202ENST00000512290 ADGRD1Q6QNK2 874 aa12.55□□□□□ -0.4
MSC-AS1-202ENST00000512290 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
MSC-AS1-202ENST00000512290 FANCAO15360 1455 aa12.53□□□□□ -0.4
MSC-AS1-202ENST00000512290 PLEKHD1A6NEE1 506 aa12.53□□□□□ -0.4
MSC-AS1-202ENST00000512290 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
MSC-AS1-202ENST00000512290 ESF1Q9H501 851 aaKnown RBP12.53□□□□□ -0.4
MSC-AS1-202ENST00000512290 DENND4BO75064 1496 aaPredicted RBP12.53□□□□□ -0.4
MSC-AS1-202ENST00000512290 ABCA8O94911 1581 aa12.52□□□□□ -0.4
MSC-AS1-202ENST00000512290 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
MSC-AS1-202ENST00000512290 ATP10BO94823 1461 aa12.52□□□□□ -0.41
MSC-AS1-202ENST00000512290 RANGAP1P46060 587 aaPredicted RBP12.51□□□□□ -0.41
MSC-AS1-202ENST00000512290 ZNF454Q8N9F8 522 aa12.51□□□□□ -0.41
MSC-AS1-202ENST00000512290 KCNK17Q96T54 332 aa12.5□□□□□ -0.41
MSC-AS1-202ENST00000512290 TK2O00142 265 aa12.49□□□□□ -0.41
MSC-AS1-202ENST00000512290 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
MSC-AS1-202ENST00000512290 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
MSC-AS1-202ENST00000512290 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
MSC-AS1-202ENST00000512290 EVI5O60447 810 aa12.47□□□□□ -0.41
MSC-AS1-202ENST00000512290 MFSD10Q14728 455 aa12.47□□□□□ -0.41
MSC-AS1-202ENST00000512290 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.41
MSC-AS1-202ENST00000512290 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
MSC-AS1-202ENST00000512290 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
MSC-AS1-202ENST00000512290 ANO8Q9HCE9 1232 aaPredicted RBP12.45□□□□□ -0.42
MSC-AS1-202ENST00000512290 FER1L4A9Z1Z3 1794 aa12.44□□□□□ -0.42
MSC-AS1-202ENST00000512290 BBXQ8WY36 941 aaPredicted RBP12.44□□□□□ -0.42
MSC-AS1-202ENST00000512290 ARHGEF40Q8TER5 1519 aa12.43□□□□□ -0.42
MSC-AS1-202ENST00000512290 HRO43593 1189 aa12.43□□□□□ -0.42
MSC-AS1-202ENST00000512290 FOSBP53539 338 aa12.43□□□□□ -0.42
MSC-AS1-202ENST00000512290 FRMPD1Q5SYB0 1578 aa12.43□□□□□ -0.42
MSC-AS1-202ENST00000512290 ZFYVE16Q7Z3T8 1539 aa12.42□□□□□ -0.42
MSC-AS1-202ENST00000512290 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
MSC-AS1-202ENST00000512290 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
MSC-AS1-202ENST00000512290 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
MSC-AS1-202ENST00000512290 PREX1Q8TCU6 1659 aa12.42□□□□□ -0.42
MSC-AS1-202ENST00000512290 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
MSC-AS1-202ENST00000512290 PTPRTO14522 1441 aa12.41□□□□□ -0.42
MSC-AS1-202ENST00000512290 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
MSC-AS1-202ENST00000512290 ATP1B4Q9UN42 357 aaPredicted RBP12.41□□□□□ -0.42
MSC-AS1-202ENST00000512290 EFCAB5A4FU69 1503 aa12.41□□□□□ -0.42
MSC-AS1-202ENST00000512290 PTPREP23469 700 aa12.4□□□□□ -0.42
MSC-AS1-202ENST00000512290 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
MSC-AS1-202ENST00000512290 STRCQ7RTU9 1775 aa12.4□□□□□ -0.42
MSC-AS1-202ENST00000512290 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
MSC-AS1-202ENST00000512290 MAGI2Q86UL8 1455 aa12.39□□□□□ -0.43
MSC-AS1-202ENST00000512290 SCAPERQ9BY12 1400 aa12.38□□□□□ -0.43
MSC-AS1-202ENST00000512290 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
MSC-AS1-202ENST00000512290 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
MSC-AS1-202ENST00000512290 ATP10AO60312 1499 aa12.38□□□□□ -0.43
MSC-AS1-202ENST00000512290 RICTORQ6R327 1708 aa12.37□□□□□ -0.43
MSC-AS1-202ENST00000512290 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
MSC-AS1-202ENST00000512290 TTC37Q6PGP7 1564 aa12.37□□□□□ -0.43
MSC-AS1-202ENST00000512290 HSPA1LP34931 641 aa12.36□□□□□ -0.43
MSC-AS1-202ENST00000512290 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
MSC-AS1-202ENST00000512290 ZNF335Q9H4Z2 1342 aaPredicted RBP12.35□□□□□ -0.43
MSC-AS1-202ENST00000512290 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
MSC-AS1-202ENST00000512290 IQSEC2Q5JU85 1478 aa12.34□□□□□ -0.43
MSC-AS1-202ENST00000512290 TOM1O60784 492 aa12.34□□□□□ -0.43
MSC-AS1-202ENST00000512290 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
MSC-AS1-202ENST00000512290 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
MSC-AS1-202ENST00000512290 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
MSC-AS1-202ENST00000512290 C9orf84Q5VXU9 1444 aa12.34□□□□□ -0.43
MSC-AS1-202ENST00000512290 SLC4A5Q9BY07 1137 aa12.33□□□□□ -0.44
MSC-AS1-202ENST00000512290 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
MSC-AS1-202ENST00000512290 RAPGEF6Q8TEU7 1601 aa12.33□□□□□ -0.44
MSC-AS1-202ENST00000512290 AFAP1Q8N556 730 aa12.32□□□□□ -0.44
MSC-AS1-202ENST00000512290 LTBP4Q8N2S1 1624 aa12.32□□□□□ -0.44
MSC-AS1-202ENST00000512290 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
MSC-AS1-202ENST00000512290 ZMYM4Q5VZL5 1548 aa12.31□□□□□ -0.44
MSC-AS1-202ENST00000512290 SIGLEC1Q9BZZ2 1709 aa12.31□□□□□ -0.44
MSC-AS1-202ENST00000512290 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
MSC-AS1-202ENST00000512290 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
MSC-AS1-202ENST00000512290 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
MSC-AS1-202ENST00000512290 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
MSC-AS1-202ENST00000512290 PCDHGA10Q9Y5H3 936 aa12.29□□□□□ -0.44
MSC-AS1-202ENST00000512290 PLA2G2EQ9NZK7 142 aa12.28□□□□□ -0.44
MSC-AS1-202ENST00000512290 NUP153P49790 1475 aaKnown RBP12.27□□□□□ -0.44
MSC-AS1-202ENST00000512290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.44
MSC-AS1-202ENST00000512290 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
MSC-AS1-202ENST00000512290 DPYSL4O14531 572 aa12.27□□□□□ -0.45
MSC-AS1-202ENST00000512290 CDK11AQ9UQ88 783 aaPredicted RBP12.27□□□□□ -0.45
MSC-AS1-202ENST00000512290 PHF14O94880 888 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms