RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 IDI1Q13907 227 aa16.17■□□□□ 0.18
PDLIM5-217ENST00000512274 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
PDLIM5-217ENST00000512274 RGS12O14924 1447 aa16.16■□□□□ 0.18
PDLIM5-217ENST00000512274 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
PDLIM5-217ENST00000512274 MAST1Q9Y2H9 1570 aa16.14■□□□□ 0.17
PDLIM5-217ENST00000512274 ARHGAP31Q2M1Z3 1444 aa16.14■□□□□ 0.17
PDLIM5-217ENST00000512274 QTRT2Q9H974 415 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-217ENST00000512274 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
PDLIM5-217ENST00000512274 AHDC1Q5TGY3 1603 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-217ENST00000512274 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
PDLIM5-217ENST00000512274 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.12■□□□□ 0.17
PDLIM5-217ENST00000512274 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-217ENST00000512274 C8orf37Q96NL8 207 aa16.11■□□□□ 0.17
PDLIM5-217ENST00000512274 ATF3P18847 181 aa16.1■□□□□ 0.17
PDLIM5-217ENST00000512274 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
PDLIM5-217ENST00000512274 DIP2AQ14689 1571 aa16.09■□□□□ 0.17
PDLIM5-217ENST00000512274 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-217ENST00000512274 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.17
PDLIM5-217ENST00000512274 CADPS2Q86UW7 1296 aa16.08■□□□□ 0.16
PDLIM5-217ENST00000512274 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
PDLIM5-217ENST00000512274 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
PDLIM5-217ENST00000512274 PPP1R15AO75807 674 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-217ENST00000512274 BRINP3Q76B58 766 aa16.06■□□□□ 0.16
PDLIM5-217ENST00000512274 ATAD2Q6PL18 1390 aa16.05■□□□□ 0.16
PDLIM5-217ENST00000512274 FOXD1Q16676 465 aa16.05■□□□□ 0.16
PDLIM5-217ENST00000512274 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
PDLIM5-217ENST00000512274 KANK1Q14678 1352 aa16.04■□□□□ 0.16
PDLIM5-217ENST00000512274 KIF15Q9NS87 1388 aa16.03■□□□□ 0.16
PDLIM5-217ENST00000512274 NCOA3Q9Y6Q9 1424 aa16.02■□□□□ 0.16
PDLIM5-217ENST00000512274 PLEKHG1Q9ULL1 1385 aa16.02■□□□□ 0.16
PDLIM5-217ENST00000512274 ADAMTS2O95450 1211 aa16.02■□□□□ 0.16
PDLIM5-217ENST00000512274 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
PDLIM5-217ENST00000512274 APLP2Q06481 763 aa16.01■□□□□ 0.15
PDLIM5-217ENST00000512274 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
PDLIM5-217ENST00000512274 TBX22Q9Y458 520 aa16■□□□□ 0.15
PDLIM5-217ENST00000512274 ERBINQ96RT1 1412 aa16■□□□□ 0.15
PDLIM5-217ENST00000512274 RIMS2Q9UQ26 1411 aa16■□□□□ 0.15
PDLIM5-217ENST00000512274 GCC2Q8IWJ2 1684 aa15.99■□□□□ 0.15
PDLIM5-217ENST00000512274 SRCAPQ6ZRS2 3230 aa15.99■□□□□ 0.15
PDLIM5-217ENST00000512274 LRRC59Q96AG4 307 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-217ENST00000512274 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
PDLIM5-217ENST00000512274 NOS1P29475 1434 aa15.99■□□□□ 0.15
PDLIM5-217ENST00000512274 SETD5Q9C0A6 1442 aa15.99■□□□□ 0.15
PDLIM5-217ENST00000512274 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
PDLIM5-217ENST00000512274 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
PDLIM5-217ENST00000512274 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-217ENST00000512274 HDGFP51858 240 aaKnown RBP15.97■□□□□ 0.15
PDLIM5-217ENST00000512274 SLC52A1Q9NWF4 448 aa15.97■□□□□ 0.15
PDLIM5-217ENST00000512274 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
PDLIM5-217ENST00000512274 MYOM3Q5VTT5 1437 aa15.96■□□□□ 0.15
PDLIM5-217ENST00000512274 USP21Q9UK80 565 aa15.96■□□□□ 0.15
PDLIM5-217ENST00000512274 LMTK2Q8IWU2 1503 aa15.95■□□□□ 0.14
PDLIM5-217ENST00000512274 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
PDLIM5-217ENST00000512274 CROCC2H7BZ55 1655 aa15.95■□□□□ 0.14
PDLIM5-217ENST00000512274 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
PDLIM5-217ENST00000512274 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
PDLIM5-217ENST00000512274 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
PDLIM5-217ENST00000512274 TMEM131LA2VDJ0 1609 aa15.93■□□□□ 0.14
PDLIM5-217ENST00000512274 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
PDLIM5-217ENST00000512274 ABCC5O15440 1437 aa15.92■□□□□ 0.14
PDLIM5-217ENST00000512274 MST1RQ04912 1400 aa15.92■□□□□ 0.14
PDLIM5-217ENST00000512274 CCDC125Q86Z20 511 aa15.91■□□□□ 0.14
PDLIM5-217ENST00000512274 PTPRUQ92729 1446 aa15.91■□□□□ 0.14
PDLIM5-217ENST00000512274 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDLIM5-217ENST00000512274 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
PDLIM5-217ENST00000512274 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
PDLIM5-217ENST00000512274 TRPM2O94759 1503 aa15.88■□□□□ 0.13
PDLIM5-217ENST00000512274 PIK3R4Q99570 1358 aa15.87■□□□□ 0.13
PDLIM5-217ENST00000512274 DCCP43146 1447 aa15.87■□□□□ 0.13
PDLIM5-217ENST00000512274 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-217ENST00000512274 DEFB132Q7Z7B7 95 aa15.87■□□□□ 0.13
PDLIM5-217ENST00000512274 ATRNO75882 1429 aa15.86■□□□□ 0.13
PDLIM5-217ENST00000512274 DAPK1P53355 1430 aa15.85■□□□□ 0.13
PDLIM5-217ENST00000512274 LRP5O75197 1615 aa15.84■□□□□ 0.13
PDLIM5-217ENST00000512274 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
PDLIM5-217ENST00000512274 FNBP4Q8N3X1 1017 aaPredicted RBP15.84■□□□□ 0.13
PDLIM5-217ENST00000512274 ANKRD30AQ9BXX3 1397 aa15.83■□□□□ 0.12
PDLIM5-217ENST00000512274 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
PDLIM5-217ENST00000512274 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-217ENST00000512274 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-217ENST00000512274 UNC13BO14795 1591 aa15.81■□□□□ 0.12
PDLIM5-217ENST00000512274 NALCNQ8IZF0 1738 aa15.8■□□□□ 0.12
PDLIM5-217ENST00000512274 BLMP54132 1417 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-217ENST00000512274 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
PDLIM5-217ENST00000512274 SF3B2Q13435 895 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-217ENST00000512274 GJD4Q96KN9 370 aaPredicted RBP15.79■□□□□ 0.12
PDLIM5-217ENST00000512274 ORAI2Q96SN7 254 aa15.79■□□□□ 0.12
PDLIM5-217ENST00000512274 BRWD3Q6RI45 1802 aa15.79■□□□□ 0.12
PDLIM5-217ENST00000512274 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
PDLIM5-217ENST00000512274 ADGRL3Q9HAR2 1447 aa15.77■□□□□ 0.12
PDLIM5-217ENST00000512274 C1orf167Q5SNV9 1468 aa15.77■□□□□ 0.11
PDLIM5-217ENST00000512274 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.11
PDLIM5-217ENST00000512274 NRXN3Q9Y4C0 1643 aa15.76■□□□□ 0.11
PDLIM5-217ENST00000512274 SOS2Q07890 1332 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-217ENST00000512274 EP400Q96L91 3159 aa15.76■□□□□ 0.11
PDLIM5-217ENST00000512274 METP08581 1390 aa15.75■□□□□ 0.11
PDLIM5-217ENST00000512274 HRCP23327 699 aa15.75■□□□□ 0.11
PDLIM5-217ENST00000512274 E9PCH4 1651 aa15.74■□□□□ 0.11
PDLIM5-217ENST00000512274 LAMC1P11047 1609 aa15.74■□□□□ 0.11
PDLIM5-217ENST00000512274 COL22A1Q8NFW1 1626 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms