RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
MSH3-202ENST00000512258 TLL1O43897 1013 aa10.49□□□□□ -0.73
MSH3-202ENST00000512258 DGAT1O75907 488 aa10.49□□□□□ -0.73
MSH3-202ENST00000512258 LCE2AQ5TA79 106 aaPredicted RBP10.49□□□□□ -0.73
MSH3-202ENST00000512258 PCDHB3Q9Y5E6 796 aa10.49□□□□□ -0.73
MSH3-202ENST00000512258 LIAT1Q6ZQX7 453 aa10.48□□□□□ -0.73
MSH3-202ENST00000512258 ZNF598Q86UK7 904 aaKnown RBP10.48□□□□□ -0.73
MSH3-202ENST00000512258 PKDCCQ504Y2 493 aa10.47□□□□□ -0.73
MSH3-202ENST00000512258 PPEF1O14829 653 aaPredicted RBP10.46□□□□□ -0.73
MSH3-202ENST00000512258 GDF9O60383 454 aa10.46□□□□□ -0.73
MSH3-202ENST00000512258 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
MSH3-202ENST00000512258 ANKLE1Q8NAG6 615 aa10.45□□□□□ -0.74
MSH3-202ENST00000512258 S1PR4O95977 384 aa10.43□□□□□ -0.74
MSH3-202ENST00000512258 PRR14Q9BWN1 585 aa10.43□□□□□ -0.74
MSH3-202ENST00000512258 ZNF697Q5TEC3 545 aa10.42□□□□□ -0.74
MSH3-202ENST00000512258 PLA2G2CQ5R387 149 aa10.41□□□□□ -0.74
MSH3-202ENST00000512258 FAM187AA6NFU0 413 aa10.4□□□□□ -0.74
MSH3-202ENST00000512258 TNFRSF10AO00220 468 aa10.4□□□□□ -0.74
MSH3-202ENST00000512258 ST8SIA5O15466 376 aa10.39□□□□□ -0.75
MSH3-202ENST00000512258 ACTN4O43707 911 aaKnown RBP10.39□□□□□ -0.75
MSH3-202ENST00000512258 AAASQ9NRG9 546 aa10.39□□□□□ -0.75
MSH3-202ENST00000512258 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
MSH3-202ENST00000512258 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
MSH3-202ENST00000512258 SLC4A3P48751 1232 aa10.37□□□□□ -0.75
MSH3-202ENST00000512258 DNAJB2P25686 324 aa10.36□□□□□ -0.75
MSH3-202ENST00000512258 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
MSH3-202ENST00000512258 ADH1BP00325 375 aa10.34□□□□□ -0.75
MSH3-202ENST00000512258 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
MSH3-202ENST00000512258 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
MSH3-202ENST00000512258 SLC10A3P09131 477 aa10.33□□□□□ -0.76
MSH3-202ENST00000512258 CFHP08603 1231 aa10.32□□□□□ -0.76
MSH3-202ENST00000512258 PTGDRQ13258 359 aa10.32□□□□□ -0.76
MSH3-202ENST00000512258 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
MSH3-202ENST00000512258 DACH1Q9UI36 760 aa10.32□□□□□ -0.76
MSH3-202ENST00000512258 MLLT3P42568 568 aaPredicted RBP10.31□□□□□ -0.76
MSH3-202ENST00000512258 KMT5BQ4FZB7 885 aa10.31□□□□□ -0.76
MSH3-202ENST00000512258 RCCD1A6NED2 376 aa10.3□□□□□ -0.76
MSH3-202ENST00000512258 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
MSH3-202ENST00000512258 CRIPAKQ8N1N5 446 aa10.29□□□□□ -0.76
MSH3-202ENST00000512258 RBM46Q8TBY0 533 aaKnown RBP10.29□□□□□ -0.76
MSH3-202ENST00000512258 SLC6A16Q9GZN6 736 aa10.29□□□□□ -0.76
MSH3-202ENST00000512258 ABCC9O60706 1549 aa10.25□□□□□ -0.77
MSH3-202ENST00000512258 NR1I2O75469 434 aa10.25□□□□□ -0.77
MSH3-202ENST00000512258 AVPP01185 164 aa10.25□□□□□ -0.77
MSH3-202ENST00000512258 SCUBE3Q8IX30 993 aa10.25□□□□□ -0.77
MSH3-202ENST00000512258 TOR4AQ9NXH8 423 aa10.25□□□□□ -0.77
MSH3-202ENST00000512258 LMOD2Q6P5Q4 547 aa10.24□□□□□ -0.77
MSH3-202ENST00000512258 FOXC1Q12948 553 aa10.23□□□□□ -0.77
MSH3-202ENST00000512258 GMPR2Q9P2T1 348 aaKnown RBP10.23□□□□□ -0.77
MSH3-202ENST00000512258 PUS10Q3MIT2 529 aaKnown RBP10.22□□□□□ -0.77
MSH3-202ENST00000512258 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
MSH3-202ENST00000512258 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
MSH3-202ENST00000512258 WFS1O76024 890 aa10.2□□□□□ -0.78
MSH3-202ENST00000512258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
MSH3-202ENST00000512258 RPIAP49247 311 aa10.19□□□□□ -0.78
MSH3-202ENST00000512258 SPSB2Q99619 263 aa10.19□□□□□ -0.78
MSH3-202ENST00000512258 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
MSH3-202ENST00000512258 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
MSH3-202ENST00000512258 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
MSH3-202ENST00000512258 WIPF1O43516 503 aa10.17□□□□□ -0.78
MSH3-202ENST00000512258 PXYLP1Q8TE99 480 aa10.17□□□□□ -0.78
MSH3-202ENST00000512258 ARHGEF1Q92888 912 aaKnown RBP10.17□□□□□ -0.78
MSH3-202ENST00000512258 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
MSH3-202ENST00000512258 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
MSH3-202ENST00000512258 AXIN1O15169 862 aa10.16□□□□□ -0.78
MSH3-202ENST00000512258 C11orf95C9JLR9 678 aaPredicted RBP10.15□□□□□ -0.78
MSH3-202ENST00000512258 FCF1Q9Y324 198 aaKnown RBP10.15□□□□□ -0.78
MSH3-202ENST00000512258 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
MSH3-202ENST00000512258 MORN1Q5T089 497 aa10.13□□□□□ -0.79
MSH3-202ENST00000512258 FAM160A2Q8N612 972 aaPredicted RBP10.13□□□□□ -0.79
MSH3-202ENST00000512258 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
MSH3-202ENST00000512258 STK17AQ9UEE5 414 aa10.13□□□□□ -0.79
MSH3-202ENST00000512258 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
MSH3-202ENST00000512258 CYP4X1Q8N118 509 aa10.12□□□□□ -0.79
MSH3-202ENST00000512258 FCHSD2O94868 740 aa10.09□□□□□ -0.79
MSH3-202ENST00000512258 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
MSH3-202ENST00000512258 METTL3Q86U44 580 aaKnown RBP10.09□□□□□ -0.79
MSH3-202ENST00000512258 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
MSH3-202ENST00000512258 OATP04181 439 aa10.08□□□□□ -0.8
MSH3-202ENST00000512258 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
MSH3-202ENST00000512258 SMPD1P17405 629 aa10.07□□□□□ -0.8
MSH3-202ENST00000512258 FUT2Q10981 343 aa10.07□□□□□ -0.8
MSH3-202ENST00000512258 SLC27A5Q9Y2P5 690 aa10.06□□□□□ -0.8
MSH3-202ENST00000512258 ZCCHC6Q5VYS8 1495 aaKnown RBP10.05□□□□□ -0.8
MSH3-202ENST00000512258 INSM1Q01101 510 aaPredicted RBP10.05□□□□□ -0.8
MSH3-202ENST00000512258 ATP13A2Q9NQ11 1180 aa10.05□□□□□ -0.8
MSH3-202ENST00000512258 BRICD5Q6PL45 260 aa10.03□□□□□ -0.8
MSH3-202ENST00000512258 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
MSH3-202ENST00000512258 TTC24A2A3L6 582 aaPredicted RBP10.02□□□□□ -0.81
MSH3-202ENST00000512258 WNT7AO00755 349 aa10.02□□□□□ -0.81
MSH3-202ENST00000512258 TERTO14746 1132 aaKnown RBP10.02□□□□□ -0.81
MSH3-202ENST00000512258 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.81
MSH3-202ENST00000512258 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
MSH3-202ENST00000512258 RSPH4AQ5TD94 716 aa10.02□□□□□ -0.81
MSH3-202ENST00000512258 TRIM47Q96LD4 638 aa10.02□□□□□ -0.81
MSH3-202ENST00000512258 DAXXQ9UER7 740 aaPredicted RBP10.02□□□□□ -0.81
MSH3-202ENST00000512258 FECHP22830 423 aa10.01□□□□□ -0.81
MSH3-202ENST00000512258 J3QL48 77 aa10□□□□□ -0.81
MSH3-202ENST00000512258 HIC1Q14526 733 aa10□□□□□ -0.81
MSH3-202ENST00000512258 MSS51Q4VC12 460 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms