RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 RALGAPBQ86X10 1494 aa14.24□□□□□ -0.13
PDGFRA-209ENST00000512143 ADGRF5Q8IZF2 1346 aa14.22□□□□□ -0.13
PDGFRA-209ENST00000512143 SETD1BQ9UPS6 1966 aaKnown RBP14.22□□□□□ -0.13
PDGFRA-209ENST00000512143 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
PDGFRA-209ENST00000512143 PTPRMP28827 1452 aa14.22□□□□□ -0.13
PDGFRA-209ENST00000512143 TRPM1Q7Z4N2 1603 aa14.22□□□□□ -0.13
PDGFRA-209ENST00000512143 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
PDGFRA-209ENST00000512143 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.13
PDGFRA-209ENST00000512143 KIAA1210Q9ULL0 1709 aa14.19□□□□□ -0.14
PDGFRA-209ENST00000512143 PIK3C2GO75747 1445 aa14.19□□□□□ -0.14
PDGFRA-209ENST00000512143 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
PDGFRA-209ENST00000512143 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
PDGFRA-209ENST00000512143 MYO3AQ8NEV4 1616 aa14.19□□□□□ -0.14
PDGFRA-209ENST00000512143 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
PDGFRA-209ENST00000512143 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
PDGFRA-209ENST00000512143 NBPF1Q3BBV0 1214 aa14.18□□□□□ -0.14
PDGFRA-209ENST00000512143 RIMS2Q9UQ26 1411 aa14.17□□□□□ -0.14
PDGFRA-209ENST00000512143 LAMC1P11047 1609 aa14.17□□□□□ -0.14
PDGFRA-209ENST00000512143 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
PDGFRA-209ENST00000512143 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
PDGFRA-209ENST00000512143 C14orf93Q9H972 538 aaKnown RBP14.16□□□□□ -0.14
PDGFRA-209ENST00000512143 SLIT1O75093 1534 aa14.15□□□□□ -0.14
PDGFRA-209ENST00000512143 CEP170BQ9Y4F5 1589 aaPredicted RBP14.15□□□□□ -0.14
PDGFRA-209ENST00000512143 ROCK2O75116 1388 aaKnown RBP14.15□□□□□ -0.14
PDGFRA-209ENST00000512143 PLPPR3Q6T4P5 718 aa14.15□□□□□ -0.14
PDGFRA-209ENST00000512143 ZNF142P52746 1687 aaPredicted RBP14.14□□□□□ -0.15
PDGFRA-209ENST00000512143 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
PDGFRA-209ENST00000512143 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDGFRA-209ENST00000512143 CFAP70Q5T0N1 1121 aa14.14□□□□□ -0.15
PDGFRA-209ENST00000512143 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.14□□□□□ -0.15
PDGFRA-209ENST00000512143 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
PDGFRA-209ENST00000512143 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
PDGFRA-209ENST00000512143 THEMISQ8N1K5 641 aaPredicted RBP14.13□□□□□ -0.15
PDGFRA-209ENST00000512143 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
PDGFRA-209ENST00000512143 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
PDGFRA-209ENST00000512143 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
PDGFRA-209ENST00000512143 USP47Q96K76 1375 aa14.11□□□□□ -0.15
PDGFRA-209ENST00000512143 LTKP29376 864 aa14.11□□□□□ -0.15
PDGFRA-209ENST00000512143 NRXN3Q9Y4C0 1643 aa14.09□□□□□ -0.15
PDGFRA-209ENST00000512143 HIRIP3Q9BW71 556 aaPredicted RBP14.09□□□□□ -0.15
PDGFRA-209ENST00000512143 IQGAP1P46940 1657 aa14.09□□□□□ -0.15
PDGFRA-209ENST00000512143 ALKQ9UM73 1620 aa14.08□□□□□ -0.15
PDGFRA-209ENST00000512143 SCAF11Q99590 1463 aaKnown RBP14.08□□□□□ -0.16
PDGFRA-209ENST00000512143 PLEKHG1Q9ULL1 1385 aa14.08□□□□□ -0.16
PDGFRA-209ENST00000512143 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
PDGFRA-209ENST00000512143 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
PDGFRA-209ENST00000512143 TXNDC2Q86VQ3 553 aa14.07□□□□□ -0.16
PDGFRA-209ENST00000512143 MED14O60244 1454 aa14.06□□□□□ -0.16
PDGFRA-209ENST00000512143 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
PDGFRA-209ENST00000512143 ADAMTS13Q76LX8 1427 aa14.06□□□□□ -0.16
PDGFRA-209ENST00000512143 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
PDGFRA-209ENST00000512143 TMEM132EQ6IEE7 984 aa14.05□□□□□ -0.16
PDGFRA-209ENST00000512143 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
PDGFRA-209ENST00000512143 TESK2Q96S53 571 aa14.04□□□□□ -0.16
PDGFRA-209ENST00000512143 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.17
PDGFRA-209ENST00000512143 YTHDC2Q9H6S0 1430 aaKnown RBP14.01□□□□□ -0.17
PDGFRA-209ENST00000512143 METP08581 1390 aa14.01□□□□□ -0.17
PDGFRA-209ENST00000512143 WASHC2AQ641Q2 1341 aa14.01□□□□□ -0.17
PDGFRA-209ENST00000512143 TBX22Q9Y458 520 aa14.01□□□□□ -0.17
PDGFRA-209ENST00000512143 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
PDGFRA-209ENST00000512143 EIF3AQ14152 1382 aaKnown RBP13.99□□□□□ -0.17
PDGFRA-209ENST00000512143 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
PDGFRA-209ENST00000512143 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
PDGFRA-209ENST00000512143 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
PDGFRA-209ENST00000512143 DIP2AQ14689 1571 aa13.99□□□□□ -0.17
PDGFRA-209ENST00000512143 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
PDGFRA-209ENST00000512143 CCDC7Q96M83 1385 aa13.98□□□□□ -0.17
PDGFRA-209ENST00000512143 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
PDGFRA-209ENST00000512143 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
PDGFRA-209ENST00000512143 LMTK3Q96Q04 1460 aa13.98□□□□□ -0.17
PDGFRA-209ENST00000512143 ARHGEF28Q8N1W1 1705 aaKnown RBP13.98□□□□□ -0.17
PDGFRA-209ENST00000512143 TECPR2O15040 1411 aa13.98□□□□□ -0.17
PDGFRA-209ENST00000512143 SIRT1Q96EB6 747 aa13.97□□□□□ -0.17
PDGFRA-209ENST00000512143 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
PDGFRA-209ENST00000512143 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
PDGFRA-209ENST00000512143 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 BCANQ96GW7 911 aa13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 STK26Q9P289 416 aa13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 PTPRUQ92729 1446 aa13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 PIK3R4Q99570 1358 aa13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
PDGFRA-209ENST00000512143 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
PDGFRA-209ENST00000512143 FAM135BQ49AJ0 1406 aa13.93□□□□□ -0.18
PDGFRA-209ENST00000512143 TMF1P82094 1093 aa13.93□□□□□ -0.18
PDGFRA-209ENST00000512143 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
PDGFRA-209ENST00000512143 QRICH2Q9H0J4 1663 aa13.92□□□□□ -0.18
PDGFRA-209ENST00000512143 CPS1P31327 1500 aa13.92□□□□□ -0.18
PDGFRA-209ENST00000512143 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
PDGFRA-209ENST00000512143 HSPA2P54652 639 aa13.91□□□□□ -0.18
PDGFRA-209ENST00000512143 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
PDGFRA-209ENST00000512143 XRN1Q8IZH2 1706 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-209ENST00000512143 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-209ENST00000512143 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
PDGFRA-209ENST00000512143 ROBO2Q9HCK4 1378 aa13.9□□□□□ -0.18
PDGFRA-209ENST00000512143 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
PDGFRA-209ENST00000512143 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-209ENST00000512143 PTCH1Q13635 1447 aa13.9□□□□□ -0.19
PDGFRA-209ENST00000512143 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms