RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 CPS1P31327 1500 aa15.11■□□□□ 0.01
COPS4-211ENST00000511891 TET3O43151 1660 aa15.1■□□□□ 0.01
COPS4-211ENST00000511891 EID1Q9Y6B2 187 aa15.1■□□□□ 0.01
COPS4-211ENST00000511891 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
COPS4-211ENST00000511891 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
COPS4-211ENST00000511891 SLC52A1Q9NWF4 448 aa15.08■□□□□ 0
COPS4-211ENST00000511891 NUP155O75694 1391 aa15.08■□□□□ 0
COPS4-211ENST00000511891 STRCP1A6NGW2 1772 aa15.08■□□□□ 0
COPS4-211ENST00000511891 ADGRB3O60242 1522 aa15.07■□□□□ 0
COPS4-211ENST00000511891 GCC2Q8IWJ2 1684 aa15.06■□□□□ 0
COPS4-211ENST00000511891 IQGAP3Q86VI3 1631 aa15.06■□□□□ 0
COPS4-211ENST00000511891 E9PCH4 1651 aa15.06■□□□□ 0
COPS4-211ENST00000511891 KDM5AP29375 1690 aaKnown RBP15.06■□□□□ 0
COPS4-211ENST00000511891 PIP4K2BP78356 416 aa15.05■□□□□ -0
COPS4-211ENST00000511891 LRRC7Q96NW7 1537 aa15.04■□□□□ -0
COPS4-211ENST00000511891 CHGAP10645 457 aaKnown RBP15.03■□□□□ -0
COPS4-211ENST00000511891 SLC26A8Q96RN1 970 aa15.03■□□□□ -0
COPS4-211ENST00000511891 TOM1O60784 492 aa15.02■□□□□ -0
COPS4-211ENST00000511891 MYO5BQ9ULV0 1848 aa15.01□□□□□ -0.01
COPS4-211ENST00000511891 BCANQ96GW7 911 aa15.01□□□□□ -0.01
COPS4-211ENST00000511891 ZFYVE9O95405 1425 aa15□□□□□ -0.01
COPS4-211ENST00000511891 NAIPQ13075 1403 aa15□□□□□ -0.01
COPS4-211ENST00000511891 RIMS2Q9UQ26 1411 aa15□□□□□ -0.01
COPS4-211ENST00000511891 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
COPS4-211ENST00000511891 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
COPS4-211ENST00000511891 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
COPS4-211ENST00000511891 PPP1R15AO75807 674 aaPredicted RBP14.98□□□□□ -0.01
COPS4-211ENST00000511891 HSPA1LP34931 641 aa14.98□□□□□ -0.01
COPS4-211ENST00000511891 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
COPS4-211ENST00000511891 KCNA6P17658 529 aa14.96□□□□□ -0.01
COPS4-211ENST00000511891 RBM33Q96EV2 1170 aaKnown RBP14.96□□□□□ -0.01
COPS4-211ENST00000511891 PLEKHG1Q9ULL1 1385 aa14.96□□□□□ -0.02
COPS4-211ENST00000511891 XIRP1Q702N8 1843 aaKnown RBP14.94□□□□□ -0.02
COPS4-211ENST00000511891 HFM1A2PYH4 1435 aa14.94□□□□□ -0.02
COPS4-211ENST00000511891 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
COPS4-211ENST00000511891 TRIM52Q96A61 297 aa14.94□□□□□ -0.02
COPS4-211ENST00000511891 TMEM94Q12767 1356 aa14.94□□□□□ -0.02
COPS4-211ENST00000511891 PROSER2Q86WR7 435 aaPredicted RBP14.93□□□□□ -0.02
COPS4-211ENST00000511891 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.93□□□□□ -0.02
COPS4-211ENST00000511891 SPHKAPQ2M3C7 1700 aa14.92□□□□□ -0.02
COPS4-211ENST00000511891 NWD1Q149M9 1564 aa14.9□□□□□ -0.02
COPS4-211ENST00000511891 ABCB7O75027 752 aa14.9□□□□□ -0.02
COPS4-211ENST00000511891 ILDR2Q71H61 639 aa14.9□□□□□ -0.02
COPS4-211ENST00000511891 TBX22Q9Y458 520 aa14.9□□□□□ -0.02
COPS4-211ENST00000511891 ADAMTS13Q76LX8 1427 aa14.9□□□□□ -0.02
COPS4-211ENST00000511891 ZNF326Q5BKZ1 582 aaKnown RBP14.89□□□□□ -0.03
COPS4-211ENST00000511891 NKTRP30414 1462 aaKnown RBP14.89□□□□□ -0.03
COPS4-211ENST00000511891 CLTCL1P53675 1640 aa14.88□□□□□ -0.03
COPS4-211ENST00000511891 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
COPS4-211ENST00000511891 TRPM2O94759 1503 aa14.87□□□□□ -0.03
COPS4-211ENST00000511891 CHD2O14647 1828 aaKnown RBP14.86□□□□□ -0.03
COPS4-211ENST00000511891 DIP2AQ14689 1571 aa14.84□□□□□ -0.03
COPS4-211ENST00000511891 PTPRUQ92729 1446 aa14.83□□□□□ -0.03
COPS4-211ENST00000511891 MSH6P52701 1360 aa14.83□□□□□ -0.04
COPS4-211ENST00000511891 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
COPS4-211ENST00000511891 AMOTL2Q9Y2J4 779 aa14.82□□□□□ -0.04
COPS4-211ENST00000511891 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
COPS4-211ENST00000511891 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
COPS4-211ENST00000511891 MED1Q15648 1581 aaPredicted RBP14.81□□□□□ -0.04
COPS4-211ENST00000511891 C14orf37Q86TY3 774 aa14.81□□□□□ -0.04
COPS4-211ENST00000511891 PIK3R4Q99570 1358 aa14.81□□□□□ -0.04
COPS4-211ENST00000511891 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
COPS4-211ENST00000511891 METP08581 1390 aa14.8□□□□□ -0.04
COPS4-211ENST00000511891 KIF1BO60333 1816 aa14.8□□□□□ -0.04
COPS4-211ENST00000511891 ROBO1Q9Y6N7 1651 aa14.78□□□□□ -0.04
COPS4-211ENST00000511891 MPHOSPH9Q99550 1183 aa14.78□□□□□ -0.04
COPS4-211ENST00000511891 SLAIN2Q9P270 581 aa14.78□□□□□ -0.04
COPS4-211ENST00000511891 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
COPS4-211ENST00000511891 NCOA3Q9Y6Q9 1424 aa14.76□□□□□ -0.05
COPS4-211ENST00000511891 SETD5Q9C0A6 1442 aa14.75□□□□□ -0.05
COPS4-211ENST00000511891 XRN1Q8IZH2 1706 aaKnown RBP14.75□□□□□ -0.05
COPS4-211ENST00000511891 SLC4A2P04920 1241 aa14.75□□□□□ -0.05
COPS4-211ENST00000511891 C19orf44Q9H6X5 657 aa14.75□□□□□ -0.05
COPS4-211ENST00000511891 VGFO15240 615 aaPredicted RBP14.74□□□□□ -0.05
COPS4-211ENST00000511891 ATF3P18847 181 aa14.74□□□□□ -0.05
COPS4-211ENST00000511891 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.74□□□□□ -0.05
COPS4-211ENST00000511891 RPGRIP1LQ68CZ1 1315 aa14.73□□□□□ -0.05
COPS4-211ENST00000511891 RGL3Q3MIN7 710 aa14.73□□□□□ -0.05
COPS4-211ENST00000511891 CCDC144AA2RUR9 1427 aa14.73□□□□□ -0.05
COPS4-211ENST00000511891 CADPS2Q86UW7 1296 aa14.72□□□□□ -0.05
COPS4-211ENST00000511891 RAB3GAP2Q9H2M9 1393 aa14.72□□□□□ -0.05
COPS4-211ENST00000511891 SOCS7O14512 581 aa14.71□□□□□ -0.05
COPS4-211ENST00000511891 PPLO60437 1756 aa14.7□□□□□ -0.06
COPS4-211ENST00000511891 SPATA31E1Q6ZUB1 1445 aa14.7□□□□□ -0.06
COPS4-211ENST00000511891 PHLPP1O60346 1717 aa14.69□□□□□ -0.06
COPS4-211ENST00000511891 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
COPS4-211ENST00000511891 SETD1AO15047 1707 aaKnown RBP14.69□□□□□ -0.06
COPS4-211ENST00000511891 BRINP3Q76B58 766 aa14.67□□□□□ -0.06
COPS4-211ENST00000511891 ROBO2Q9HCK4 1378 aa14.67□□□□□ -0.06
COPS4-211ENST00000511891 DCCP43146 1447 aa14.66□□□□□ -0.06
COPS4-211ENST00000511891 ADGRL3Q9HAR2 1447 aa14.66□□□□□ -0.06
COPS4-211ENST00000511891 RGS17Q9UGC6 210 aaPredicted RBP14.66□□□□□ -0.06
COPS4-211ENST00000511891 MST1RQ04912 1400 aa14.66□□□□□ -0.06
COPS4-211ENST00000511891 NALCNQ8IZF0 1738 aa14.65□□□□□ -0.06
COPS4-211ENST00000511891 COL16A1Q07092 1604 aaPredicted RBP14.65□□□□□ -0.06
COPS4-211ENST00000511891 PTCH1Q13635 1447 aa14.65□□□□□ -0.06
COPS4-211ENST00000511891 ACIN1Q9UKV3 1341 aaKnown RBP14.65□□□□□ -0.06
COPS4-211ENST00000511891 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
COPS4-211ENST00000511891 JCADQ9P266 1359 aa14.64□□□□□ -0.07
COPS4-211ENST00000511891 AHDC1Q5TGY3 1603 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms