RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
CALCOCO2-220ENST00000511816 RNF40O75150 1001 aa8.15□□□□□ -1.1
CALCOCO2-220ENST00000511816 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
CALCOCO2-220ENST00000511816 FAM198AQ9UFP1 575 aa8.15□□□□□ -1.1
CALCOCO2-220ENST00000511816 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
CALCOCO2-220ENST00000511816 CLCN1P35523 988 aa8.14□□□□□ -1.11
CALCOCO2-220ENST00000511816 RSPH4AQ5TD94 716 aa8.14□□□□□ -1.11
CALCOCO2-220ENST00000511816 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
CALCOCO2-220ENST00000511816 METTL3Q86U44 580 aaKnown RBP8.13□□□□□ -1.11
CALCOCO2-220ENST00000511816 SLF2Q8IX21 1173 aa8.13□□□□□ -1.11
CALCOCO2-220ENST00000511816 HCSTQ9UBK5 93 aa8.13□□□□□ -1.11
CALCOCO2-220ENST00000511816 FAM161AQ3B820 660 aa8.12□□□□□ -1.11
CALCOCO2-220ENST00000511816 PXYLP1Q8TE99 480 aa8.12□□□□□ -1.11
CALCOCO2-220ENST00000511816 EYA1Q99502 592 aa8.12□□□□□ -1.11
CALCOCO2-220ENST00000511816 RCCD1A6NED2 376 aa8.11□□□□□ -1.11
CALCOCO2-220ENST00000511816 SOWAHBA6NEL2 793 aa8.11□□□□□ -1.11
CALCOCO2-220ENST00000511816 PTPN5P54829 565 aa8.11□□□□□ -1.11
CALCOCO2-220ENST00000511816 THSD4Q6ZMP0 1018 aa8.11□□□□□ -1.11
CALCOCO2-220ENST00000511816 SAMD7Q7Z3H4 446 aa8.11□□□□□ -1.11
CALCOCO2-220ENST00000511816 GPCPD1Q9NPB8 672 aa8.11□□□□□ -1.11
CALCOCO2-220ENST00000511816 PPP4CP60510 307 aa8.1□□□□□ -1.11
CALCOCO2-220ENST00000511816 NYAP1Q6ZVC0 841 aa8.1□□□□□ -1.11
CALCOCO2-220ENST00000511816 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
CALCOCO2-220ENST00000511816 IL27Q8NEV9 243 aa8.1□□□□□ -1.11
CALCOCO2-220ENST00000511816 SWT1Q5T5J6 900 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-220ENST00000511816 TMEM134Q9H6X4 195 aa8.09□□□□□ -1.11
CALCOCO2-220ENST00000511816 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
CALCOCO2-220ENST00000511816 BCAMP50895 628 aa8.08□□□□□ -1.12
CALCOCO2-220ENST00000511816 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
CALCOCO2-220ENST00000511816 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
CALCOCO2-220ENST00000511816 PRR14Q9BWN1 585 aa8.08□□□□□ -1.12
CALCOCO2-220ENST00000511816 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
CALCOCO2-220ENST00000511816 MDM2Q00987 491 aaPredicted RBP8.07□□□□□ -1.12
CALCOCO2-220ENST00000511816 C3orf80F5H4A9 247 aa8.06□□□□□ -1.12
CALCOCO2-220ENST00000511816 FAM117AQ9C073 453 aa8.05□□□□□ -1.12
CALCOCO2-220ENST00000511816 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
CALCOCO2-220ENST00000511816 KMT5BQ4FZB7 885 aa8.04□□□□□ -1.12
CALCOCO2-220ENST00000511816 RDH13Q8NBN7 331 aa8.04□□□□□ -1.12
CALCOCO2-220ENST00000511816 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
CALCOCO2-220ENST00000511816 DIXDC1Q155Q3 683 aa8.03□□□□□ -1.12
CALCOCO2-220ENST00000511816 DDX11L8A8MPP1 907 aa8.02□□□□□ -1.13
CALCOCO2-220ENST00000511816 TMUB1Q9BVT8 246 aa8.02□□□□□ -1.13
CALCOCO2-220ENST00000511816 GOPCQ9HD26 462 aa8.02□□□□□ -1.13
CALCOCO2-220ENST00000511816 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
CALCOCO2-220ENST00000511816 PHOX2BQ99453 314 aa8.01□□□□□ -1.13
CALCOCO2-220ENST00000511816 FAM217BQ9NTX9 383 aaPredicted RBP8□□□□□ -1.13
CALCOCO2-220ENST00000511816 CFHP08603 1231 aa7.99□□□□□ -1.13
CALCOCO2-220ENST00000511816 MS4A1P11836 297 aa7.99□□□□□ -1.13
CALCOCO2-220ENST00000511816 NLRP7Q8WX94 980 aa7.99□□□□□ -1.13
CALCOCO2-220ENST00000511816 PCMTD1Q96MG8 357 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-220ENST00000511816 BEGAINQ9BUH8 593 aa7.99□□□□□ -1.13
CALCOCO2-220ENST00000511816 REPIN1Q9BWE0 567 aaKnown RBP7.99□□□□□ -1.13
CALCOCO2-220ENST00000511816 ATP1B4Q9UN42 357 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-220ENST00000511816 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
CALCOCO2-220ENST00000511816 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
CALCOCO2-220ENST00000511816 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
CALCOCO2-220ENST00000511816 C14orf37Q86TY3 774 aa7.95□□□□□ -1.14
CALCOCO2-220ENST00000511816 PCDHB3Q9Y5E6 796 aa7.95□□□□□ -1.14
CALCOCO2-220ENST00000511816 NUTM1Q86Y26 1132 aa7.94□□□□□ -1.14
CALCOCO2-220ENST00000511816 ACTN4O43707 911 aaKnown RBP7.93□□□□□ -1.14
CALCOCO2-220ENST00000511816 APLP1P51693 650 aa7.93□□□□□ -1.14
CALCOCO2-220ENST00000511816 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
CALCOCO2-220ENST00000511816 SLC10A3P09131 477 aa7.92□□□□□ -1.14
CALCOCO2-220ENST00000511816 CD46P15529 392 aa7.92□□□□□ -1.14
CALCOCO2-220ENST00000511816 GCGRP47871 477 aa7.92□□□□□ -1.14
CALCOCO2-220ENST00000511816 KCNC4Q03721 635 aa7.92□□□□□ -1.14
CALCOCO2-220ENST00000511816 IL21Q9HBE4 155 aa7.92□□□□□ -1.14
CALCOCO2-220ENST00000511816 PLA2G2EQ9NZK7 142 aa7.92□□□□□ -1.14
CALCOCO2-220ENST00000511816 NR1I2O75469 434 aa7.91□□□□□ -1.14
CALCOCO2-220ENST00000511816 USP46P62068 366 aa7.91□□□□□ -1.14
CALCOCO2-220ENST00000511816 KDM4AO75164 1064 aa7.9□□□□□ -1.14
CALCOCO2-220ENST00000511816 ATP6V1AP38606 617 aa7.9□□□□□ -1.14
CALCOCO2-220ENST00000511816 COPS2P61201 443 aa7.9□□□□□ -1.14
CALCOCO2-220ENST00000511816 MTRQ99707 1265 aa7.89□□□□□ -1.15
CALCOCO2-220ENST00000511816 TBC1D2Q9BYX2 928 aa7.89□□□□□ -1.15
CALCOCO2-220ENST00000511816 CLK2P49760 499 aaKnown RBP7.88□□□□□ -1.15
CALCOCO2-220ENST00000511816 FUT2Q10981 343 aa7.88□□□□□ -1.15
CALCOCO2-220ENST00000511816 FLIIQ13045 1269 aa7.88□□□□□ -1.15
CALCOCO2-220ENST00000511816 TIMELESSQ9UNS1 1208 aa7.88□□□□□ -1.15
CALCOCO2-220ENST00000511816 ITGBL1O95965 494 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-220ENST00000511816 MYSM1Q5VVJ2 828 aa7.87□□□□□ -1.15
CALCOCO2-220ENST00000511816 POLR3EQ9NVU0 708 aa7.87□□□□□ -1.15
CALCOCO2-220ENST00000511816 GGCXP38435 758 aa7.86□□□□□ -1.15
CALCOCO2-220ENST00000511816 BLOC1S3Q6QNY0 202 aa7.86□□□□□ -1.15
CALCOCO2-220ENST00000511816 SPIRE2Q8WWL2 714 aa7.86□□□□□ -1.15
CALCOCO2-220ENST00000511816 GJA5P36382 358 aa7.85□□□□□ -1.15
CALCOCO2-220ENST00000511816 Q3C1V9 767 aa7.85□□□□□ -1.15
CALCOCO2-220ENST00000511816 RIC3Q7Z5B4 369 aa7.85□□□□□ -1.15
CALCOCO2-220ENST00000511816 ZPR1O75312 459 aa7.84□□□□□ -1.15
CALCOCO2-220ENST00000511816 TUSC1Q2TAM9 212 aa7.84□□□□□ -1.15
CALCOCO2-220ENST00000511816 PUS10Q3MIT2 529 aaKnown RBP7.84□□□□□ -1.15
CALCOCO2-220ENST00000511816 TJAP1Q5JTD0 557 aa7.84□□□□□ -1.15
CALCOCO2-220ENST00000511816 FMNL1O95466 1100 aaPredicted RBP7.83□□□□□ -1.16
CALCOCO2-220ENST00000511816 IFFO2Q5TF58 517 aa7.83□□□□□ -1.16
CALCOCO2-220ENST00000511816 HOXA2O43364 376 aa7.82□□□□□ -1.16
CALCOCO2-220ENST00000511816 MORN1Q5T089 497 aa7.82□□□□□ -1.16
CALCOCO2-220ENST00000511816 SCUBE3Q8IX30 993 aa7.82□□□□□ -1.16
CALCOCO2-220ENST00000511816 SPTLC1O15269 473 aa7.81□□□□□ -1.16
CALCOCO2-220ENST00000511816 RSBN1LQ6PCB5 846 aaPredicted RBP7.81□□□□□ -1.16
CALCOCO2-220ENST00000511816 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms