RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 CASKIN1Q8WXD9 1431 aa10.93□□□□□ -0.66
COPS4-209ENST00000511653 MLH3Q9UHC1 1453 aa10.93□□□□□ -0.66
COPS4-209ENST00000511653 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
COPS4-209ENST00000511653 AGLP35573 1532 aa10.91□□□□□ -0.66
COPS4-209ENST00000511653 ATMINO43313 823 aaPredicted RBP10.91□□□□□ -0.66
COPS4-209ENST00000511653 SAMD9LQ8IVG5 1584 aa10.91□□□□□ -0.66
COPS4-209ENST00000511653 MFSD10Q14728 455 aa10.9□□□□□ -0.66
COPS4-209ENST00000511653 E2F4Q16254 413 aa10.9□□□□□ -0.66
COPS4-209ENST00000511653 PDCD7Q8N8D1 485 aaKnown RBP10.9□□□□□ -0.66
COPS4-209ENST00000511653 CERKQ8TCT0 537 aa10.9□□□□□ -0.66
COPS4-209ENST00000511653 UHRF1BP1Q6BDS2 1440 aa10.9□□□□□ -0.66
COPS4-209ENST00000511653 FYCO1Q9BQS8 1478 aa10.9□□□□□ -0.67
COPS4-209ENST00000511653 SYCP2Q9BX26 1530 aa10.9□□□□□ -0.67
COPS4-209ENST00000511653 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
COPS4-209ENST00000511653 SUPT6HQ7KZ85 1726 aaKnown RBP10.88□□□□□ -0.67
COPS4-209ENST00000511653 ASTLQ6HA08 431 aaPredicted RBP10.88□□□□□ -0.67
COPS4-209ENST00000511653 MROH2AA6NES4 1674 aa10.87□□□□□ -0.67
COPS4-209ENST00000511653 PDE4AP27815 886 aa10.87□□□□□ -0.67
COPS4-209ENST00000511653 GABBR2O75899 941 aa10.86□□□□□ -0.67
COPS4-209ENST00000511653 IRX5P78411 483 aaPredicted RBP10.86□□□□□ -0.67
COPS4-209ENST00000511653 INO80Q9ULG1 1556 aaPredicted RBP10.86□□□□□ -0.67
COPS4-209ENST00000511653 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
COPS4-209ENST00000511653 GPATCH8Q9UKJ3 1502 aaKnown RBP10.85□□□□□ -0.67
COPS4-209ENST00000511653 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
COPS4-209ENST00000511653 DDX27Q96GQ7 796 aaKnown RBP10.85□□□□□ -0.67
COPS4-209ENST00000511653 CLTCQ00610 1675 aaKnown RBP10.85□□□□□ -0.67
COPS4-209ENST00000511653 PLXNC1O60486 1568 aa10.85□□□□□ -0.67
COPS4-209ENST00000511653 SEMA3EO15041 775 aa10.84□□□□□ -0.67
COPS4-209ENST00000511653 ATP7AQ04656 1500 aa10.84□□□□□ -0.67
COPS4-209ENST00000511653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
COPS4-209ENST00000511653 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
COPS4-209ENST00000511653 LTBP4Q8N2S1 1624 aa10.83□□□□□ -0.68
COPS4-209ENST00000511653 ZNF777Q9ULD5 760 aaPredicted RBP10.82□□□□□ -0.68
COPS4-209ENST00000511653 ZNF142P52746 1687 aaPredicted RBP10.82□□□□□ -0.68
COPS4-209ENST00000511653 NCOA1Q15788 1441 aa10.82□□□□□ -0.68
COPS4-209ENST00000511653 CNTLNQ9NXG0 1405 aa10.82□□□□□ -0.68
COPS4-209ENST00000511653 MYO3AQ8NEV4 1616 aa10.82□□□□□ -0.68
COPS4-209ENST00000511653 PTPRTO14522 1441 aa10.82□□□□□ -0.68
COPS4-209ENST00000511653 CAMSAP1Q5T5Y3 1602 aa10.81□□□□□ -0.68
COPS4-209ENST00000511653 TIAM1Q13009 1591 aa10.81□□□□□ -0.68
COPS4-209ENST00000511653 HNRNPMP52272 730 aaKnown RBP eCLIP10.8□□□□□ -0.68
COPS4-209ENST00000511653 CAMK2BQ13554 666 aa10.8□□□□□ -0.68
COPS4-209ENST00000511653 ADGBQ8N7X0 1667 aa10.8□□□□□ -0.68
COPS4-209ENST00000511653 SPAG9O60271 1321 aaKnown RBP10.8□□□□□ -0.68
COPS4-209ENST00000511653 CLCN6P51797 869 aa10.79□□□□□ -0.68
COPS4-209ENST00000511653 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
COPS4-209ENST00000511653 ESF1Q9H501 851 aaKnown RBP10.79□□□□□ -0.68
COPS4-209ENST00000511653 GPHNQ9NQX3 736 aaPredicted RBP10.79□□□□□ -0.68
COPS4-209ENST00000511653 NPATQ14207 1427 aa10.79□□□□□ -0.68
COPS4-209ENST00000511653 A2MP01023 1474 aa10.78□□□□□ -0.68
COPS4-209ENST00000511653 KIAA1107Q9UPP5 1409 aa10.78□□□□□ -0.68
COPS4-209ENST00000511653 DSG2Q14126 1118 aa10.78□□□□□ -0.68
COPS4-209ENST00000511653 POTEHQ6S545 545 aa10.78□□□□□ -0.68
COPS4-209ENST00000511653 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
COPS4-209ENST00000511653 COLQQ9Y215 455 aaPredicted RBP10.78□□□□□ -0.68
COPS4-209ENST00000511653 CEP170BQ9Y4F5 1589 aaPredicted RBP10.78□□□□□ -0.68
COPS4-209ENST00000511653 PLEKHH2Q8IVE3 1493 aa10.77□□□□□ -0.69
COPS4-209ENST00000511653 ZMYM3Q14202 1370 aa10.77□□□□□ -0.69
COPS4-209ENST00000511653 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
COPS4-209ENST00000511653 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.69
COPS4-209ENST00000511653 CCNB3Q8WWL7 1395 aa10.76□□□□□ -0.69
COPS4-209ENST00000511653 TESPA1A2RU30 521 aaPredicted RBP10.76□□□□□ -0.69
COPS4-209ENST00000511653 POTEFA5A3E0 1075 aa10.76□□□□□ -0.69
COPS4-209ENST00000511653 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
COPS4-209ENST00000511653 SPATA31D1Q6ZQQ2 1576 aa10.76□□□□□ -0.69
COPS4-209ENST00000511653 MTUS2Q5JR59 1369 aa10.76□□□□□ -0.69
COPS4-209ENST00000511653 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
COPS4-209ENST00000511653 PTPRKQ15262 1439 aa10.75□□□□□ -0.69
COPS4-209ENST00000511653 ZNF644Q9H582 1327 aaPredicted RBP10.75□□□□□ -0.69
COPS4-209ENST00000511653 MBD5Q9P267 1494 aa10.75□□□□□ -0.69
COPS4-209ENST00000511653 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
COPS4-209ENST00000511653 IQSEC2Q5JU85 1478 aa10.74□□□□□ -0.69
COPS4-209ENST00000511653 DISP3Q9P2K9 1392 aa10.74□□□□□ -0.69
COPS4-209ENST00000511653 POTEIP0CG38 1075 aa10.74□□□□□ -0.69
COPS4-209ENST00000511653 IER5LQ5T953 404 aa10.74□□□□□ -0.69
COPS4-209ENST00000511653 ILDR2Q71H61 639 aa10.74□□□□□ -0.69
COPS4-209ENST00000511653 BOLA1Q9Y3E2 137 aa10.74□□□□□ -0.69
COPS4-209ENST00000511653 TMEM92Q6UXU6 159 aa10.73□□□□□ -0.69
COPS4-209ENST00000511653 TCOF1Q13428 1488 aaKnown RBP10.73□□□□□ -0.69
COPS4-209ENST00000511653 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
COPS4-209ENST00000511653 ARIH1Q9Y4X5 557 aaPredicted RBP10.73□□□□□ -0.69
COPS4-209ENST00000511653 PLA2R1Q13018 1463 aa10.73□□□□□ -0.69
COPS4-209ENST00000511653 DNMT1P26358 1616 aaKnown RBP10.72□□□□□ -0.69
COPS4-209ENST00000511653 CEP162Q5TB80 1403 aa10.72□□□□□ -0.69
COPS4-209ENST00000511653 C2orf72A6NCS6 295 aa10.72□□□□□ -0.69
COPS4-209ENST00000511653 GGT6Q6P531 493 aa10.72□□□□□ -0.69
COPS4-209ENST00000511653 ZNF335Q9H4Z2 1342 aaPredicted RBP10.72□□□□□ -0.69
COPS4-209ENST00000511653 KIF3CO14782 793 aa10.71□□□□□ -0.69
COPS4-209ENST00000511653 CAMSAP2Q08AD1 1489 aa10.71□□□□□ -0.7
COPS4-209ENST00000511653 NEURL4Q96JN8 1562 aa10.7□□□□□ -0.7
COPS4-209ENST00000511653 PLCG2P16885 1265 aa10.7□□□□□ -0.7
COPS4-209ENST00000511653 MLLT3P42568 568 aaPredicted RBP10.7□□□□□ -0.7
COPS4-209ENST00000511653 A2ML1A8K2U0 1454 aa10.69□□□□□ -0.7
COPS4-209ENST00000511653 NCOA2Q15596 1464 aa10.69□□□□□ -0.7
COPS4-209ENST00000511653 CCDC141Q6ZP82 1450 aa10.69□□□□□ -0.7
COPS4-209ENST00000511653 DPYSL4O14531 572 aa10.69□□□□□ -0.7
COPS4-209ENST00000511653 FOXK1P85037 733 aa10.69□□□□□ -0.7
COPS4-209ENST00000511653 DCBLD2Q96PD2 775 aa10.69□□□□□ -0.7
COPS4-209ENST00000511653 RTEL1-TNFRSF6BF6WH68 1400 aa10.69□□□□□ -0.7
COPS4-209ENST00000511653 KDM5DQ9BY66 1539 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms