RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
SCARB2-205ENST00000511129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
SCARB2-205ENST00000511129 BCAMP50895 628 aa9.22□□□□□ -0.93
SCARB2-205ENST00000511129 PARP9Q8IXQ6 854 aa9.22□□□□□ -0.93
SCARB2-205ENST00000511129 PHOX2BQ99453 314 aa9.22□□□□□ -0.93
SCARB2-205ENST00000511129 EYA1Q99502 592 aa9.22□□□□□ -0.93
SCARB2-205ENST00000511129 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
SCARB2-205ENST00000511129 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
SCARB2-205ENST00000511129 HDGFP51858 240 aaKnown RBP9.21□□□□□ -0.94
SCARB2-205ENST00000511129 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
SCARB2-205ENST00000511129 A0A0G2JS52 829 aa9.2□□□□□ -0.94
SCARB2-205ENST00000511129 RCCD1A6NED2 376 aa9.2□□□□□ -0.94
SCARB2-205ENST00000511129 SMAPO00193 183 aa9.2□□□□□ -0.94
SCARB2-205ENST00000511129 DNAJB2P25686 324 aa9.2□□□□□ -0.94
SCARB2-205ENST00000511129 GIGYF2Q6Y7W6 1299 aaKnown RBP9.2□□□□□ -0.94
SCARB2-205ENST00000511129 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
SCARB2-205ENST00000511129 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
SCARB2-205ENST00000511129 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
SCARB2-205ENST00000511129 RGS20O76081 388 aa9.18□□□□□ -0.94
SCARB2-205ENST00000511129 C3orf80F5H4A9 247 aa9.17□□□□□ -0.94
SCARB2-205ENST00000511129 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
SCARB2-205ENST00000511129 IL27Q8NEV9 243 aa9.17□□□□□ -0.94
SCARB2-205ENST00000511129 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
SCARB2-205ENST00000511129 ITGBL1O95965 494 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-205ENST00000511129 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-205ENST00000511129 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
SCARB2-205ENST00000511129 REPIN1Q9BWE0 567 aaKnown RBP9.16□□□□□ -0.94
SCARB2-205ENST00000511129 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
SCARB2-205ENST00000511129 TMUB1Q9BVT8 246 aa9.15□□□□□ -0.94
SCARB2-205ENST00000511129 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
SCARB2-205ENST00000511129 WBP1LQ9NX94 342 aa9.15□□□□□ -0.94
SCARB2-205ENST00000511129 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
SCARB2-205ENST00000511129 SULF1Q8IWU6 871 aa9.14□□□□□ -0.95
SCARB2-205ENST00000511129 ARXQ96QS3 562 aa9.14□□□□□ -0.95
SCARB2-205ENST00000511129 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
SCARB2-205ENST00000511129 FAM217BQ9NTX9 383 aaPredicted RBP9.13□□□□□ -0.95
SCARB2-205ENST00000511129 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
SCARB2-205ENST00000511129 MS4A1P11836 297 aa9.12□□□□□ -0.95
SCARB2-205ENST00000511129 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-205ENST00000511129 LRCH3Q96II8 777 aa9.11□□□□□ -0.95
SCARB2-205ENST00000511129 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
SCARB2-205ENST00000511129 BEGAINQ9BUH8 593 aa9.1□□□□□ -0.95
SCARB2-205ENST00000511129 TSR3Q9UJK0 312 aaKnown RBP9.1□□□□□ -0.95
SCARB2-205ENST00000511129 HPS5Q9UPZ3 1129 aa9.1□□□□□ -0.95
SCARB2-205ENST00000511129 RDH13Q8NBN7 331 aa9.09□□□□□ -0.95
SCARB2-205ENST00000511129 KCNC4Q03721 635 aa9.08□□□□□ -0.96
SCARB2-205ENST00000511129 SAMD7Q7Z3H4 446 aa9.08□□□□□ -0.96
SCARB2-205ENST00000511129 SLF2Q8IX21 1173 aa9.08□□□□□ -0.96
SCARB2-205ENST00000511129 RSPH6AQ9H0K4 717 aa9.08□□□□□ -0.96
SCARB2-205ENST00000511129 RNF40O75150 1001 aa9.07□□□□□ -0.96
SCARB2-205ENST00000511129 IRX2Q9BZI1 471 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-205ENST00000511129 PLEKHG3A1L390 1219 aa9.06□□□□□ -0.96
SCARB2-205ENST00000511129 DIXDC1Q155Q3 683 aa9.06□□□□□ -0.96
SCARB2-205ENST00000511129 ATP1B4Q9UN42 357 aaPredicted RBP9.06□□□□□ -0.96
SCARB2-205ENST00000511129 CD46P15529 392 aa9.05□□□□□ -0.96
SCARB2-205ENST00000511129 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
SCARB2-205ENST00000511129 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
SCARB2-205ENST00000511129 PPP4CP60510 307 aa9.04□□□□□ -0.96
SCARB2-205ENST00000511129 PCMTD1Q96MG8 357 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-205ENST00000511129 GOPCQ9HD26 462 aa9.01□□□□□ -0.97
SCARB2-205ENST00000511129 GCGRP47871 477 aa9□□□□□ -0.97
SCARB2-205ENST00000511129 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
SCARB2-205ENST00000511129 GTF3C3Q9Y5Q9 886 aa9□□□□□ -0.97
SCARB2-205ENST00000511129 KDM4AO75164 1064 aa8.99□□□□□ -0.97
SCARB2-205ENST00000511129 SLC10A3P09131 477 aa8.99□□□□□ -0.97
SCARB2-205ENST00000511129 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
SCARB2-205ENST00000511129 SH3D19Q5HYK7 790 aa8.99□□□□□ -0.97
SCARB2-205ENST00000511129 USP46P62068 366 aa8.98□□□□□ -0.97
SCARB2-205ENST00000511129 KMT5BQ4FZB7 885 aa8.98□□□□□ -0.97
SCARB2-205ENST00000511129 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
SCARB2-205ENST00000511129 SPIRE2Q8WWL2 714 aa8.98□□□□□ -0.97
SCARB2-205ENST00000511129 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
SCARB2-205ENST00000511129 CFHP08603 1231 aa8.97□□□□□ -0.97
SCARB2-205ENST00000511129 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
SCARB2-205ENST00000511129 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
SCARB2-205ENST00000511129 MYSM1Q5VVJ2 828 aa8.96□□□□□ -0.98
SCARB2-205ENST00000511129 RIC3Q7Z5B4 369 aa8.95□□□□□ -0.98
SCARB2-205ENST00000511129 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
SCARB2-205ENST00000511129 MTRQ99707 1265 aa8.94□□□□□ -0.98
SCARB2-205ENST00000511129 IL21Q9HBE4 155 aa8.93□□□□□ -0.98
SCARB2-205ENST00000511129 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
SCARB2-205ENST00000511129 ATP6V1AP38606 617 aa8.92□□□□□ -0.98
SCARB2-205ENST00000511129 APLP1P51693 650 aa8.92□□□□□ -0.98
SCARB2-205ENST00000511129 FUT2Q10981 343 aa8.92□□□□□ -0.98
SCARB2-205ENST00000511129 SPTLC1O15269 473 aa8.91□□□□□ -0.98
SCARB2-205ENST00000511129 HOXA2O43364 376 aa8.91□□□□□ -0.98
SCARB2-205ENST00000511129 NDUFV2P19404 249 aa8.91□□□□□ -0.98
SCARB2-205ENST00000511129 GJA5P36382 358 aa8.91□□□□□ -0.98
SCARB2-205ENST00000511129 RSBN1LQ6PCB5 846 aaPredicted RBP8.91□□□□□ -0.98
SCARB2-205ENST00000511129 PROCA1Q8NCQ7 364 aaPredicted RBP8.91□□□□□ -0.98
SCARB2-205ENST00000511129 ACTN4O43707 911 aaKnown RBP8.9□□□□□ -0.98
SCARB2-205ENST00000511129 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
SCARB2-205ENST00000511129 FDX1P10109 184 aa8.89□□□□□ -0.99
SCARB2-205ENST00000511129 CSPP1Q1MSJ5 1256 aa8.89□□□□□ -0.99
SCARB2-205ENST00000511129 LIMD1Q9UGP4 676 aa8.89□□□□□ -0.99
SCARB2-205ENST00000511129 NUTM2BA6NNL0 878 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-205ENST00000511129 NUTM2EB1AL46 878 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-205ENST00000511129 TUSC1Q2TAM9 212 aa8.88□□□□□ -0.99
SCARB2-205ENST00000511129 NUTM2DQ5VT03 806 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-205ENST00000511129 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms