RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 NBPF26B4DH59 902 aa8.66□□□□□ -1.02
PTPN13-208ENST00000511105 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
PTPN13-208ENST00000511105 IRX2Q9BZI1 471 aaPredicted RBP8.66□□□□□ -1.02
PTPN13-208ENST00000511105 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
PTPN13-208ENST00000511105 PTGDRQ13258 359 aa8.65□□□□□ -1.02
PTPN13-208ENST00000511105 TTC13Q8NBP0 860 aa8.65□□□□□ -1.02
PTPN13-208ENST00000511105 SWT1Q5T5J6 900 aaKnown RBP8.64□□□□□ -1.03
PTPN13-208ENST00000511105 HOMEZQ8IX15 550 aa8.64□□□□□ -1.03
PTPN13-208ENST00000511105 EYA1Q99502 592 aa8.62□□□□□ -1.03
PTPN13-208ENST00000511105 FECHP22830 423 aa8.61□□□□□ -1.03
PTPN13-208ENST00000511105 HDGFP51858 240 aaKnown RBP8.6□□□□□ -1.03
PTPN13-208ENST00000511105 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
PTPN13-208ENST00000511105 APLP1P51693 650 aa8.59□□□□□ -1.03
PTPN13-208ENST00000511105 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
PTPN13-208ENST00000511105 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
PTPN13-208ENST00000511105 RBM27Q9P2N5 1060 aaKnown RBP8.58□□□□□ -1.04
PTPN13-208ENST00000511105 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
PTPN13-208ENST00000511105 A0A0G2JS52 829 aa8.57□□□□□ -1.04
PTPN13-208ENST00000511105 KCNC4Q03721 635 aa8.57□□□□□ -1.04
PTPN13-208ENST00000511105 NLRP7Q8WX94 980 aa8.57□□□□□ -1.04
PTPN13-208ENST00000511105 ZMYND10O75800 440 aa8.56□□□□□ -1.04
PTPN13-208ENST00000511105 FCHSD2O94868 740 aa8.56□□□□□ -1.04
PTPN13-208ENST00000511105 ITGBL1O95965 494 aaPredicted RBP8.56□□□□□ -1.04
PTPN13-208ENST00000511105 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
PTPN13-208ENST00000511105 RCCD1A6NED2 376 aa8.55□□□□□ -1.04
PTPN13-208ENST00000511105 COPS2P61201 443 aa8.55□□□□□ -1.04
PTPN13-208ENST00000511105 TJAP1Q5JTD0 557 aa8.55□□□□□ -1.04
PTPN13-208ENST00000511105 NKX2-3Q8TAU0 364 aa8.55□□□□□ -1.04
PTPN13-208ENST00000511105 MTRQ99707 1265 aa8.55□□□□□ -1.04
PTPN13-208ENST00000511105 NYAP1Q6ZVC0 841 aa8.54□□□□□ -1.04
PTPN13-208ENST00000511105 ATAD2BQ9ULI0 1458 aa8.52□□□□□ -1.05
PTPN13-208ENST00000511105 RBM46Q8TBY0 533 aaKnown RBP8.52□□□□□ -1.05
PTPN13-208ENST00000511105 SMYD5Q6GMV2 418 aa8.51□□□□□ -1.05
PTPN13-208ENST00000511105 SLF2Q8IX21 1173 aa8.51□□□□□ -1.05
PTPN13-208ENST00000511105 MROH2BQ7Z745 1585 aa8.51□□□□□ -1.05
PTPN13-208ENST00000511105 GPR37O15354 613 aa8.5□□□□□ -1.05
PTPN13-208ENST00000511105 DNAJB2P25686 324 aa8.5□□□□□ -1.05
PTPN13-208ENST00000511105 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
PTPN13-208ENST00000511105 TMEM134Q9H6X4 195 aa8.49□□□□□ -1.05
PTPN13-208ENST00000511105 SMARCA4P51532 1647 aa8.49□□□□□ -1.05
PTPN13-208ENST00000511105 NCAPD3P42695 1498 aa8.49□□□□□ -1.05
PTPN13-208ENST00000511105 GNPATO15228 680 aa8.48□□□□□ -1.05
PTPN13-208ENST00000511105 SLC10A3P09131 477 aa8.48□□□□□ -1.05
PTPN13-208ENST00000511105 HIC1Q14526 733 aa8.48□□□□□ -1.05
PTPN13-208ENST00000511105 PXYLP1Q8TE99 480 aa8.48□□□□□ -1.05
PTPN13-208ENST00000511105 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
PTPN13-208ENST00000511105 NESP48681 1621 aa8.47□□□□□ -1.05
PTPN13-208ENST00000511105 PHOX2BQ99453 314 aa8.47□□□□□ -1.05
PTPN13-208ENST00000511105 PPP1R18Q6NYC8 613 aa8.46□□□□□ -1.06
PTPN13-208ENST00000511105 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
PTPN13-208ENST00000511105 GPIHBP1Q8IV16 184 aa8.46□□□□□ -1.06
PTPN13-208ENST00000511105 METTL3Q86U44 580 aaKnown RBP8.45□□□□□ -1.06
PTPN13-208ENST00000511105 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
PTPN13-208ENST00000511105 OATP04181 439 aa8.44□□□□□ -1.06
PTPN13-208ENST00000511105 CFHP08603 1231 aa8.44□□□□□ -1.06
PTPN13-208ENST00000511105 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
PTPN13-208ENST00000511105 Q6ZNB5 142 aa8.44□□□□□ -1.06
PTPN13-208ENST00000511105 PCDHB3Q9Y5E6 796 aa8.44□□□□□ -1.06
PTPN13-208ENST00000511105 BAZ1BQ9UIG0 1483 aaKnown RBP8.44□□□□□ -1.06
PTPN13-208ENST00000511105 TLL1O43897 1013 aa8.43□□□□□ -1.06
PTPN13-208ENST00000511105 PUS10Q3MIT2 529 aaKnown RBP8.43□□□□□ -1.06
PTPN13-208ENST00000511105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.42□□□□□ -1.06
PTPN13-208ENST00000511105 ERCC6Q03468 1493 aa8.42□□□□□ -1.06
PTPN13-208ENST00000511105 WIZO95785 1651 aa8.42□□□□□ -1.06
PTPN13-208ENST00000511105 SMARCA2P51531 1590 aa8.41□□□□□ -1.06
PTPN13-208ENST00000511105 DDX11L8A8MPP1 907 aa8.41□□□□□ -1.06
PTPN13-208ENST00000511105 PPEF1O14829 653 aaPredicted RBP8.41□□□□□ -1.06
PTPN13-208ENST00000511105 ZPR1O75312 459 aa8.41□□□□□ -1.06
PTPN13-208ENST00000511105 AK7Q96M32 723 aa8.41□□□□□ -1.06
PTPN13-208ENST00000511105 SUPT5HO00267 1087 aaKnown RBP8.4□□□□□ -1.06
PTPN13-208ENST00000511105 PRKD2Q9BZL6 878 aa8.4□□□□□ -1.06
PTPN13-208ENST00000511105 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.4□□□□□ -1.06
PTPN13-208ENST00000511105 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
PTPN13-208ENST00000511105 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
PTPN13-208ENST00000511105 KMT5BQ4FZB7 885 aa8.38□□□□□ -1.07
PTPN13-208ENST00000511105 GPBP1L1Q9HC44 474 aaPredicted RBP8.37□□□□□ -1.07
PTPN13-208ENST00000511105 RSF1Q96T23 1441 aaPredicted RBP8.37□□□□□ -1.07
PTPN13-208ENST00000511105 NECTIN2Q92692 538 aa8.36□□□□□ -1.07
PTPN13-208ENST00000511105 SCUBE3Q8IX30 993 aa8.35□□□□□ -1.07
PTPN13-208ENST00000511105 KDM4CQ9H3R0 1056 aa8.35□□□□□ -1.07
PTPN13-208ENST00000511105 HMGXB3Q12766 1538 aa8.34□□□□□ -1.07
PTPN13-208ENST00000511105 S1PR4O95977 384 aa8.34□□□□□ -1.07
PTPN13-208ENST00000511105 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
PTPN13-208ENST00000511105 RNF223E7ERA6 249 aa8.33□□□□□ -1.08
PTPN13-208ENST00000511105 IRF6O14896 467 aa8.33□□□□□ -1.08
PTPN13-208ENST00000511105 FUT2Q10981 343 aa8.33□□□□□ -1.08
PTPN13-208ENST00000511105 LCE2BO14633 110 aa8.32□□□□□ -1.08
PTPN13-208ENST00000511105 TRIM66O15016 1216 aa8.32□□□□□ -1.08
PTPN13-208ENST00000511105 GFRA3O60609 400 aa8.32□□□□□ -1.08
PTPN13-208ENST00000511105 MDM2Q00987 491 aaPredicted RBP8.32□□□□□ -1.08
PTPN13-208ENST00000511105 PDE4DQ08499 809 aa8.31□□□□□ -1.08
PTPN13-208ENST00000511105 EMID1Q96A84 441 aaPredicted RBP8.31□□□□□ -1.08
PTPN13-208ENST00000511105 PEG3Q9GZU2 1588 aa8.31□□□□□ -1.08
PTPN13-208ENST00000511105 MAP2K5Q13163 448 aa8.3□□□□□ -1.08
PTPN13-208ENST00000511105 RSPH4AQ5TD94 716 aa8.3□□□□□ -1.08
PTPN13-208ENST00000511105 CCDC102AQ96A19 550 aa8.3□□□□□ -1.08
PTPN13-208ENST00000511105 CADPSQ9ULU8 1353 aa8.3□□□□□ -1.08
PTPN13-208ENST00000511105 NR1I2O75469 434 aa8.29□□□□□ -1.08
PTPN13-208ENST00000511105 GCGRP47871 477 aa8.29□□□□□ -1.08
PTPN13-208ENST00000511105 ZMYND15Q9H091 742 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms