RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 VPS9D1Q9Y2B5 631 aa11.25□□□□□ -0.61
CHD1-206ENST00000511067 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
CHD1-206ENST00000511067 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
CHD1-206ENST00000511067 PCMTD1Q96MG8 357 aaPredicted RBP11.24□□□□□ -0.61
CHD1-206ENST00000511067 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
CHD1-206ENST00000511067 SLC4A5Q9BY07 1137 aa11.23□□□□□ -0.61
CHD1-206ENST00000511067 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
CHD1-206ENST00000511067 DNAJB2P25686 324 aa11.21□□□□□ -0.61
CHD1-206ENST00000511067 NUDT18Q6ZVK8 323 aa11.21□□□□□ -0.61
CHD1-206ENST00000511067 TATDN2Q93075 761 aa11.21□□□□□ -0.61
CHD1-206ENST00000511067 ZBED2Q9BTP6 218 aa11.21□□□□□ -0.61
CHD1-206ENST00000511067 SKIV2LQ15477 1246 aaKnown RBP11.2□□□□□ -0.62
CHD1-206ENST00000511067 DIXDC1Q155Q3 683 aa11.2□□□□□ -0.62
CHD1-206ENST00000511067 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
CHD1-206ENST00000511067 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
CHD1-206ENST00000511067 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
CHD1-206ENST00000511067 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
CHD1-206ENST00000511067 FLIIQ13045 1269 aa11.16□□□□□ -0.62
CHD1-206ENST00000511067 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
CHD1-206ENST00000511067 KCTD12Q96CX2 325 aaKnown RBP11.16□□□□□ -0.62
CHD1-206ENST00000511067 CD46P15529 392 aa11.15□□□□□ -0.62
CHD1-206ENST00000511067 HCSTQ9UBK5 93 aa11.15□□□□□ -0.62
CHD1-206ENST00000511067 GOLGA8CPA6NN73 597 aa11.14□□□□□ -0.63
CHD1-206ENST00000511067 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
CHD1-206ENST00000511067 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
CHD1-206ENST00000511067 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
CHD1-206ENST00000511067 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
CHD1-206ENST00000511067 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
CHD1-206ENST00000511067 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
CHD1-206ENST00000511067 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
CHD1-206ENST00000511067 CLK2P49760 499 aaKnown RBP11.11□□□□□ -0.63
CHD1-206ENST00000511067 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHD1-206ENST00000511067 ZMYND15Q9H091 742 aa11.1□□□□□ -0.63
CHD1-206ENST00000511067 DDX11L8A8MPP1 907 aa11.09□□□□□ -0.63
CHD1-206ENST00000511067 SMAPO00193 183 aa11.09□□□□□ -0.63
CHD1-206ENST00000511067 TUSC1Q2TAM9 212 aa11.08□□□□□ -0.64
CHD1-206ENST00000511067 SPIRE2Q8WWL2 714 aa11.08□□□□□ -0.64
CHD1-206ENST00000511067 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
CHD1-206ENST00000511067 GJA5P36382 358 aa11.07□□□□□ -0.64
CHD1-206ENST00000511067 RSPH4AQ5TD94 716 aa11.07□□□□□ -0.64
CHD1-206ENST00000511067 WNT2BQ93097 391 aa11.07□□□□□ -0.64
CHD1-206ENST00000511067 PTPN5P54829 565 aa11.06□□□□□ -0.64
CHD1-206ENST00000511067 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
CHD1-206ENST00000511067 PROCA1Q8NCQ7 364 aaPredicted RBP11.06□□□□□ -0.64
CHD1-206ENST00000511067 SPTLC1O15269 473 aa11.04□□□□□ -0.64
CHD1-206ENST00000511067 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
CHD1-206ENST00000511067 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
CHD1-206ENST00000511067 LAPTM4BQ86VI4 370 aa11.04□□□□□ -0.64
CHD1-206ENST00000511067 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
CHD1-206ENST00000511067 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
CHD1-206ENST00000511067 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
CHD1-206ENST00000511067 USP46P62068 366 aa11.03□□□□□ -0.64
CHD1-206ENST00000511067 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
CHD1-206ENST00000511067 HDGFP51858 240 aaKnown RBP11.02□□□□□ -0.65
CHD1-206ENST00000511067 MCM6Q14566 821 aa11.02□□□□□ -0.65
CHD1-206ENST00000511067 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
CHD1-206ENST00000511067 PPP2R2DQ66LE6 453 aa11.02□□□□□ -0.65
CHD1-206ENST00000511067 LIMD1Q9UGP4 676 aa11.02□□□□□ -0.65
CHD1-206ENST00000511067 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
CHD1-206ENST00000511067 ANKK1Q8NFD2 765 aa11.01□□□□□ -0.65
CHD1-206ENST00000511067 PLA2G2EQ9NZK7 142 aa11.01□□□□□ -0.65
CHD1-206ENST00000511067 SEPT9Q9UHD8 586 aaPredicted RBP11.01□□□□□ -0.65
CHD1-206ENST00000511067 KDM4AO75164 1064 aa11□□□□□ -0.65
CHD1-206ENST00000511067 GCGRP47871 477 aa11□□□□□ -0.65
CHD1-206ENST00000511067 MOXD2PA6NHM9 499 aa10.99□□□□□ -0.65
CHD1-206ENST00000511067 BANK1Q8NDB2 785 aa10.99□□□□□ -0.65
CHD1-206ENST00000511067 RFC5P40937 340 aa10.98□□□□□ -0.65
CHD1-206ENST00000511067 SLF2Q8IX21 1173 aa10.98□□□□□ -0.65
CHD1-206ENST00000511067 A6NJR5 290 aa10.97□□□□□ -0.65
CHD1-206ENST00000511067 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
CHD1-206ENST00000511067 TMEM259Q4ZIN3 620 aa10.97□□□□□ -0.65
CHD1-206ENST00000511067 ZFRQ96KR1 1074 aaKnown RBP10.97□□□□□ -0.65
CHD1-206ENST00000511067 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.65
CHD1-206ENST00000511067 SLC10A3P09131 477 aa10.96□□□□□ -0.65
CHD1-206ENST00000511067 UBTFP17480 764 aaKnown RBP10.96□□□□□ -0.65
CHD1-206ENST00000511067 HOXA2O43364 376 aa10.95□□□□□ -0.66
CHD1-206ENST00000511067 PRPF38BQ5VTL8 546 aaKnown RBP10.95□□□□□ -0.66
CHD1-206ENST00000511067 ARXQ96QS3 562 aa10.95□□□□□ -0.66
CHD1-206ENST00000511067 SAMD7Q7Z3H4 446 aa10.94□□□□□ -0.66
CHD1-206ENST00000511067 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
CHD1-206ENST00000511067 SOCS7O14512 581 aa10.93□□□□□ -0.66
CHD1-206ENST00000511067 LILRB3O75022 631 aa10.93□□□□□ -0.66
CHD1-206ENST00000511067 NDUFV2P19404 249 aa10.93□□□□□ -0.66
CHD1-206ENST00000511067 BCAMP50895 628 aa10.93□□□□□ -0.66
CHD1-206ENST00000511067 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
CHD1-206ENST00000511067 GRIPAP1Q4V328 841 aa10.91□□□□□ -0.66
CHD1-206ENST00000511067 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
CHD1-206ENST00000511067 FDX1P10109 184 aa10.9□□□□□ -0.66
CHD1-206ENST00000511067 ZBTB3Q9H5J0 574 aa10.9□□□□□ -0.66
CHD1-206ENST00000511067 CFHP08603 1231 aa10.89□□□□□ -0.67
CHD1-206ENST00000511067 QPCTQ16769 361 aa10.89□□□□□ -0.67
CHD1-206ENST00000511067 CSPP1Q1MSJ5 1256 aa10.89□□□□□ -0.67
CHD1-206ENST00000511067 LRCH3Q96II8 777 aa10.89□□□□□ -0.67
CHD1-206ENST00000511067 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
CHD1-206ENST00000511067 PCDHB15Q9Y5E8 787 aa10.89□□□□□ -0.67
CHD1-206ENST00000511067 CLUAP1Q96AJ1 413 aa10.88□□□□□ -0.67
CHD1-206ENST00000511067 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
CHD1-206ENST00000511067 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
CHD1-206ENST00000511067 APBB1O00213 710 aa10.87□□□□□ -0.67
CHD1-206ENST00000511067 RAD21O60216 631 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms