RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
TRIO-217ENST00000511019 TET3O43151 1660 aa12.78□□□□□ -0.36
TRIO-217ENST00000511019 KDM5AP29375 1690 aaKnown RBP12.78□□□□□ -0.36
TRIO-217ENST00000511019 ITGAEP38570 1179 aa12.78□□□□□ -0.36
TRIO-217ENST00000511019 SLAIN2Q9P270 581 aa12.78□□□□□ -0.36
TRIO-217ENST00000511019 TBX22Q9Y458 520 aa12.78□□□□□ -0.36
TRIO-217ENST00000511019 MSH6P52701 1360 aa12.76□□□□□ -0.37
TRIO-217ENST00000511019 ADGRB3O60242 1522 aa12.76□□□□□ -0.37
TRIO-217ENST00000511019 NUTM2DQ5VT03 806 aaPredicted RBP12.75□□□□□ -0.37
TRIO-217ENST00000511019 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
TRIO-217ENST00000511019 PLEKHG1Q9ULL1 1385 aa12.75□□□□□ -0.37
TRIO-217ENST00000511019 RIMS2Q9UQ26 1411 aa12.75□□□□□ -0.37
TRIO-217ENST00000511019 NUP155O75694 1391 aa12.74□□□□□ -0.37
TRIO-217ENST00000511019 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
TRIO-217ENST00000511019 C14orf37Q86TY3 774 aa12.74□□□□□ -0.37
TRIO-217ENST00000511019 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
TRIO-217ENST00000511019 ZFYVE9O95405 1425 aa12.73□□□□□ -0.37
TRIO-217ENST00000511019 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
TRIO-217ENST00000511019 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
TRIO-217ENST00000511019 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.37
TRIO-217ENST00000511019 ATF3P18847 181 aa12.7□□□□□ -0.38
TRIO-217ENST00000511019 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
TRIO-217ENST00000511019 AMOTL2Q9Y2J4 779 aa12.69□□□□□ -0.38
TRIO-217ENST00000511019 NCOA3Q9Y6Q9 1424 aa12.69□□□□□ -0.38
TRIO-217ENST00000511019 TMEM131LA2VDJ0 1609 aa12.69□□□□□ -0.38
TRIO-217ENST00000511019 ZNF326Q5BKZ1 582 aaKnown RBP12.68□□□□□ -0.38
TRIO-217ENST00000511019 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
TRIO-217ENST00000511019 NWD1Q149M9 1564 aa12.68□□□□□ -0.38
TRIO-217ENST00000511019 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
TRIO-217ENST00000511019 UNC13BO14795 1591 aa12.67□□□□□ -0.38
TRIO-217ENST00000511019 JCADQ9P266 1359 aa12.67□□□□□ -0.38
TRIO-217ENST00000511019 ROBO1Q9Y6N7 1651 aa12.67□□□□□ -0.38
TRIO-217ENST00000511019 ADAMTS13Q76LX8 1427 aa12.66□□□□□ -0.38
TRIO-217ENST00000511019 GCC2Q8IWJ2 1684 aa12.66□□□□□ -0.38
TRIO-217ENST00000511019 E9PCH4 1651 aa12.64□□□□□ -0.39
TRIO-217ENST00000511019 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
TRIO-217ENST00000511019 SPATA31A6Q5VVP1 1343 aa12.62□□□□□ -0.39
TRIO-217ENST00000511019 IQGAP3Q86VI3 1631 aa12.62□□□□□ -0.39
TRIO-217ENST00000511019 ADRA2BP18089 450 aa12.62□□□□□ -0.39
TRIO-217ENST00000511019 MEX3CQ5U5Q3 659 aaKnown RBP12.62□□□□□ -0.39
TRIO-217ENST00000511019 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
TRIO-217ENST00000511019 PTPRUQ92729 1446 aa12.61□□□□□ -0.39
TRIO-217ENST00000511019 ZNF772Q68DY9 489 aaPredicted RBP12.6□□□□□ -0.39
TRIO-217ENST00000511019 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
TRIO-217ENST00000511019 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
TRIO-217ENST00000511019 DIP2AQ14689 1571 aa12.6□□□□□ -0.39
TRIO-217ENST00000511019 PHLPP1O60346 1717 aa12.59□□□□□ -0.39
TRIO-217ENST00000511019 TRPM2O94759 1503 aa12.59□□□□□ -0.39
TRIO-217ENST00000511019 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
TRIO-217ENST00000511019 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
TRIO-217ENST00000511019 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
TRIO-217ENST00000511019 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
TRIO-217ENST00000511019 METP08581 1390 aa12.57□□□□□ -0.4
TRIO-217ENST00000511019 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
TRIO-217ENST00000511019 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.56□□□□□ -0.4
TRIO-217ENST00000511019 PIAS4Q8N2W9 510 aaPredicted RBP12.55□□□□□ -0.4
TRIO-217ENST00000511019 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
TRIO-217ENST00000511019 DCCP43146 1447 aa12.54□□□□□ -0.4
TRIO-217ENST00000511019 RXRBP28702 533 aa12.54□□□□□ -0.4
TRIO-217ENST00000511019 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
TRIO-217ENST00000511019 NAIPQ13075 1403 aa12.54□□□□□ -0.4
TRIO-217ENST00000511019 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
TRIO-217ENST00000511019 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
TRIO-217ENST00000511019 RPGRIP1LQ68CZ1 1315 aa12.53□□□□□ -0.4
TRIO-217ENST00000511019 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.4
TRIO-217ENST00000511019 MST1RQ04912 1400 aa12.52□□□□□ -0.41
TRIO-217ENST00000511019 LRP6O75581 1613 aa12.51□□□□□ -0.41
TRIO-217ENST00000511019 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
TRIO-217ENST00000511019 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
TRIO-217ENST00000511019 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
TRIO-217ENST00000511019 NRXN3Q9Y4C0 1643 aa12.49□□□□□ -0.41
TRIO-217ENST00000511019 AFF2P51816 1311 aa12.49□□□□□ -0.41
TRIO-217ENST00000511019 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
TRIO-217ENST00000511019 NEXMIFQ5QGS0 1516 aa12.48□□□□□ -0.41
TRIO-217ENST00000511019 ASXL1Q8IXJ9 1541 aa12.48□□□□□ -0.41
TRIO-217ENST00000511019 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
TRIO-217ENST00000511019 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRIO-217ENST00000511019 C8orf37Q96NL8 207 aa12.48□□□□□ -0.41
TRIO-217ENST00000511019 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
TRIO-217ENST00000511019 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
TRIO-217ENST00000511019 XRN1Q8IZH2 1706 aaKnown RBP12.48□□□□□ -0.41
TRIO-217ENST00000511019 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
TRIO-217ENST00000511019 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
TRIO-217ENST00000511019 ROBO2Q9HCK4 1378 aa12.46□□□□□ -0.41
TRIO-217ENST00000511019 SHPRHQ149N8 1683 aa12.46□□□□□ -0.41
TRIO-217ENST00000511019 MSH5O43196 834 aa12.46□□□□□ -0.41
TRIO-217ENST00000511019 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
TRIO-217ENST00000511019 RGL3Q3MIN7 710 aa12.46□□□□□ -0.41
TRIO-217ENST00000511019 C1orf167Q5SNV9 1468 aa12.46□□□□□ -0.42
TRIO-217ENST00000511019 RBM6P78332 1123 aaKnown RBP12.45□□□□□ -0.42
TRIO-217ENST00000511019 MPHOSPH9Q99550 1183 aa12.45□□□□□ -0.42
TRIO-217ENST00000511019 PNPLA6Q8IY17 1366 aa12.44□□□□□ -0.42
TRIO-217ENST00000511019 KIF1BO60333 1816 aa12.44□□□□□ -0.42
TRIO-217ENST00000511019 SOS2Q07890 1332 aaPredicted RBP12.44□□□□□ -0.42
TRIO-217ENST00000511019 ESCO1Q5FWF5 840 aa12.44□□□□□ -0.42
TRIO-217ENST00000511019 STK26Q9P289 416 aa12.43□□□□□ -0.42
TRIO-217ENST00000511019 PTCH1Q13635 1447 aa12.43□□□□□ -0.42
TRIO-217ENST00000511019 ADGRF5Q8IZF2 1346 aa12.42□□□□□ -0.42
TRIO-217ENST00000511019 WAPLQ7Z5K2 1190 aa12.41□□□□□ -0.42
TRIO-217ENST00000511019 USP21Q9UK80 565 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms