RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
MBD4-209ENST00000511009 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
MBD4-209ENST00000511009 NBPF26B4DH59 902 aa9.05□□□□□ -0.96
MBD4-209ENST00000511009 SUPT5HO00267 1087 aaKnown RBP9.05□□□□□ -0.96
MBD4-209ENST00000511009 WBP1LQ9NX94 342 aa9.05□□□□□ -0.96
MBD4-209ENST00000511009 IFFO2Q5TF58 517 aa9.04□□□□□ -0.96
MBD4-209ENST00000511009 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
MBD4-209ENST00000511009 SAMD7Q7Z3H4 446 aa9.03□□□□□ -0.96
MBD4-209ENST00000511009 HOMEZQ8IX15 550 aa9.03□□□□□ -0.96
MBD4-209ENST00000511009 FAM117AQ9C073 453 aa9.03□□□□□ -0.96
MBD4-209ENST00000511009 AMHR2Q16671 573 aa9.02□□□□□ -0.97
MBD4-209ENST00000511009 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
MBD4-209ENST00000511009 ADGRG1Q9Y653 693 aa9.02□□□□□ -0.97
MBD4-209ENST00000511009 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
MBD4-209ENST00000511009 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
MBD4-209ENST00000511009 TSR3Q9UJK0 312 aaKnown RBP9.01□□□□□ -0.97
MBD4-209ENST00000511009 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
MBD4-209ENST00000511009 FECHP22830 423 aa9□□□□□ -0.97
MBD4-209ENST00000511009 NYAP1Q6ZVC0 841 aa9□□□□□ -0.97
MBD4-209ENST00000511009 PARP9Q8IXQ6 854 aa9□□□□□ -0.97
MBD4-209ENST00000511009 HPS5Q9UPZ3 1129 aa9□□□□□ -0.97
MBD4-209ENST00000511009 FAM161AQ3B820 660 aa8.98□□□□□ -0.97
MBD4-209ENST00000511009 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
MBD4-209ENST00000511009 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
MBD4-209ENST00000511009 ZMYND15Q9H091 742 aa8.95□□□□□ -0.98
MBD4-209ENST00000511009 TMEM134Q9H6X4 195 aa8.94□□□□□ -0.98
MBD4-209ENST00000511009 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
MBD4-209ENST00000511009 PXYLP1Q8TE99 480 aa8.93□□□□□ -0.98
MBD4-209ENST00000511009 RCCD1A6NED2 376 aa8.92□□□□□ -0.98
MBD4-209ENST00000511009 APLP1P51693 650 aa8.92□□□□□ -0.98
MBD4-209ENST00000511009 PPP4CP60510 307 aa8.92□□□□□ -0.98
MBD4-209ENST00000511009 RBM46Q8TBY0 533 aaKnown RBP8.92□□□□□ -0.98
MBD4-209ENST00000511009 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
MBD4-209ENST00000511009 A0A0G2JS52 829 aa8.91□□□□□ -0.98
MBD4-209ENST00000511009 DNAJB2P25686 324 aa8.91□□□□□ -0.98
MBD4-209ENST00000511009 TJAP1Q5JTD0 557 aa8.91□□□□□ -0.98
MBD4-209ENST00000511009 METTL3Q86U44 580 aaKnown RBP8.91□□□□□ -0.98
MBD4-209ENST00000511009 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
MBD4-209ENST00000511009 CLCN1P35523 988 aa8.89□□□□□ -0.99
MBD4-209ENST00000511009 PCMTD1Q96MG8 357 aaPredicted RBP8.89□□□□□ -0.99
MBD4-209ENST00000511009 MS4A1P11836 297 aa8.88□□□□□ -0.99
MBD4-209ENST00000511009 SLF2Q8IX21 1173 aa8.88□□□□□ -0.99
MBD4-209ENST00000511009 GOPCQ9HD26 462 aa8.88□□□□□ -0.99
MBD4-209ENST00000511009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.87□□□□□ -0.99
MBD4-209ENST00000511009 OATP04181 439 aa8.87□□□□□ -0.99
MBD4-209ENST00000511009 FLIIQ13045 1269 aa8.87□□□□□ -0.99
MBD4-209ENST00000511009 SLC10A3P09131 477 aa8.86□□□□□ -0.99
MBD4-209ENST00000511009 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
MBD4-209ENST00000511009 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
MBD4-209ENST00000511009 KCNC4Q03721 635 aa8.85□□□□□ -0.99
MBD4-209ENST00000511009 MTRQ99707 1265 aa8.85□□□□□ -0.99
MBD4-209ENST00000511009 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
MBD4-209ENST00000511009 ATP1B4Q9UN42 357 aaPredicted RBP8.85□□□□□ -0.99
MBD4-209ENST00000511009 HDGFP51858 240 aaKnown RBP8.84□□□□□ -0.99
MBD4-209ENST00000511009 ZNF516Q92618 1163 aa8.83□□□□□ -1
MBD4-209ENST00000511009 RNF40O75150 1001 aa8.82□□□□□ -1
MBD4-209ENST00000511009 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
MBD4-209ENST00000511009 SH3D19Q5HYK7 790 aa8.82□□□□□ -1
MBD4-209ENST00000511009 RGS20O76081 388 aa8.81□□□□□ -1
MBD4-209ENST00000511009 NLRP7Q8WX94 980 aa8.81□□□□□ -1
MBD4-209ENST00000511009 NECTIN2Q92692 538 aa8.81□□□□□ -1
MBD4-209ENST00000511009 IL21Q9HBE4 155 aa8.81□□□□□ -1
MBD4-209ENST00000511009 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
MBD4-209ENST00000511009 ACTN4O43707 911 aaKnown RBP8.79□□□□□ -1
MBD4-209ENST00000511009 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
MBD4-209ENST00000511009 CFHP08603 1231 aa8.77□□□□□ -1.01
MBD4-209ENST00000511009 SKIV2LQ15477 1246 aaKnown RBP8.77□□□□□ -1.01
MBD4-209ENST00000511009 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1.01
MBD4-209ENST00000511009 ARID3AQ99856 593 aa8.77□□□□□ -1.01
MBD4-209ENST00000511009 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
MBD4-209ENST00000511009 BLOC1S3Q6QNY0 202 aa8.76□□□□□ -1.01
MBD4-209ENST00000511009 UBTFP17480 764 aaKnown RBP8.75□□□□□ -1.01
MBD4-209ENST00000511009 COPS2P61201 443 aa8.75□□□□□ -1.01
MBD4-209ENST00000511009 PRR14Q9BWN1 585 aa8.75□□□□□ -1.01
MBD4-209ENST00000511009 ZPR1O75312 459 aa8.74□□□□□ -1.01
MBD4-209ENST00000511009 SLC4A3P48751 1232 aa8.74□□□□□ -1.01
MBD4-209ENST00000511009 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
MBD4-209ENST00000511009 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
MBD4-209ENST00000511009 ARID3CA6NKF2 412 aa8.72□□□□□ -1.01
MBD4-209ENST00000511009 APBB1O00213 710 aa8.72□□□□□ -1.01
MBD4-209ENST00000511009 KMT5BQ4FZB7 885 aa8.72□□□□□ -1.01
MBD4-209ENST00000511009 PPP1R18Q6NYC8 613 aa8.72□□□□□ -1.01
MBD4-209ENST00000511009 MCM6Q14566 821 aa8.71□□□□□ -1.02
MBD4-209ENST00000511009 CLUAP1Q96AJ1 413 aa8.71□□□□□ -1.02
MBD4-209ENST00000511009 A6NJR5 290 aa8.7□□□□□ -1.02
MBD4-209ENST00000511009 TLL1O43897 1013 aa8.7□□□□□ -1.02
MBD4-209ENST00000511009 GCGRP47871 477 aa8.7□□□□□ -1.02
MBD4-209ENST00000511009 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
MBD4-209ENST00000511009 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
MBD4-209ENST00000511009 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
MBD4-209ENST00000511009 CD46P15529 392 aa8.69□□□□□ -1.02
MBD4-209ENST00000511009 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
MBD4-209ENST00000511009 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
MBD4-209ENST00000511009 RAD21O60216 631 aa8.68□□□□□ -1.02
MBD4-209ENST00000511009 MORN1Q5T089 497 aa8.68□□□□□ -1.02
MBD4-209ENST00000511009 EMID1Q96A84 441 aaPredicted RBP8.68□□□□□ -1.02
MBD4-209ENST00000511009 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
MBD4-209ENST00000511009 C1orf115Q9H7X2 142 aa8.68□□□□□ -1.02
MBD4-209ENST00000511009 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
MBD4-209ENST00000511009 TRAK2O60296 914 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms