RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 KDM5AP29375 1690 aaKnown RBP13.23□□□□□ -0.29
PDGFC-206ENST00000510982 NUP155O75694 1391 aa13.22□□□□□ -0.29
PDGFC-206ENST00000510982 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
PDGFC-206ENST00000510982 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.21□□□□□ -0.29
PDGFC-206ENST00000510982 TET3O43151 1660 aa13.21□□□□□ -0.3
PDGFC-206ENST00000510982 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
PDGFC-206ENST00000510982 RIMS2Q9UQ26 1411 aa13.2□□□□□ -0.3
PDGFC-206ENST00000510982 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
PDGFC-206ENST00000510982 MED1Q15648 1581 aaPredicted RBP13.19□□□□□ -0.3
PDGFC-206ENST00000510982 PLEKHG1Q9ULL1 1385 aa13.19□□□□□ -0.3
PDGFC-206ENST00000510982 FAM135BQ49AJ0 1406 aa13.18□□□□□ -0.3
PDGFC-206ENST00000510982 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
PDGFC-206ENST00000510982 ZFYVE9O95405 1425 aa13.17□□□□□ -0.3
PDGFC-206ENST00000510982 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
PDGFC-206ENST00000510982 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
PDGFC-206ENST00000510982 MSH6P52701 1360 aa13.16□□□□□ -0.3
PDGFC-206ENST00000510982 UNC13BO14795 1591 aa13.15□□□□□ -0.3
PDGFC-206ENST00000510982 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.3
PDGFC-206ENST00000510982 TMEM131LA2VDJ0 1609 aa13.15□□□□□ -0.3
PDGFC-206ENST00000510982 MYO5BQ9ULV0 1848 aa13.15□□□□□ -0.3
PDGFC-206ENST00000510982 E9PCH4 1651 aa13.14□□□□□ -0.31
PDGFC-206ENST00000510982 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
PDGFC-206ENST00000510982 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
PDGFC-206ENST00000510982 IQGAP3Q86VI3 1631 aa13.12□□□□□ -0.31
PDGFC-206ENST00000510982 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
PDGFC-206ENST00000510982 AMOTL2Q9Y2J4 779 aa13.11□□□□□ -0.31
PDGFC-206ENST00000510982 ATF3P18847 181 aa13.1□□□□□ -0.31
PDGFC-206ENST00000510982 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
PDGFC-206ENST00000510982 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
PDGFC-206ENST00000510982 CHD2O14647 1828 aaKnown RBP13.1□□□□□ -0.31
PDGFC-206ENST00000510982 ADAMTS13Q76LX8 1427 aa13.1□□□□□ -0.31
PDGFC-206ENST00000510982 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
PDGFC-206ENST00000510982 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
PDGFC-206ENST00000510982 PIK3R4Q99570 1358 aa13.08□□□□□ -0.31
PDGFC-206ENST00000510982 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
PDGFC-206ENST00000510982 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
PDGFC-206ENST00000510982 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.32
PDGFC-206ENST00000510982 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
PDGFC-206ENST00000510982 NAIPQ13075 1403 aa13.05□□□□□ -0.32
PDGFC-206ENST00000510982 JCADQ9P266 1359 aa13.04□□□□□ -0.32
PDGFC-206ENST00000510982 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
PDGFC-206ENST00000510982 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
PDGFC-206ENST00000510982 POTEAQ6S8J7 498 aa13.03□□□□□ -0.32
PDGFC-206ENST00000510982 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
PDGFC-206ENST00000510982 TRPM2O94759 1503 aa13.03□□□□□ -0.32
PDGFC-206ENST00000510982 METP08581 1390 aa13.02□□□□□ -0.33
PDGFC-206ENST00000510982 SPHKAPQ2M3C7 1700 aa13.02□□□□□ -0.33
PDGFC-206ENST00000510982 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
PDGFC-206ENST00000510982 PHLPP1O60346 1717 aa13□□□□□ -0.33
PDGFC-206ENST00000510982 SIPA1L2Q9P2F8 1722 aaPredicted RBP13□□□□□ -0.33
PDGFC-206ENST00000510982 BRINP3Q76B58 766 aa13□□□□□ -0.33
PDGFC-206ENST00000510982 MEX3CQ5U5Q3 659 aaKnown RBP12.99□□□□□ -0.33
PDGFC-206ENST00000510982 HFM1A2PYH4 1435 aa12.98□□□□□ -0.33
PDGFC-206ENST00000510982 SPATA31A6Q5VVP1 1343 aa12.98□□□□□ -0.33
PDGFC-206ENST00000510982 RPGRIP1LQ68CZ1 1315 aa12.98□□□□□ -0.33
PDGFC-206ENST00000510982 FOXD1Q16676 465 aa12.97□□□□□ -0.33
PDGFC-206ENST00000510982 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
PDGFC-206ENST00000510982 SETBP1Q9Y6X0 1596 aa12.97□□□□□ -0.33
PDGFC-206ENST00000510982 NRXN3Q9Y4C0 1643 aa12.96□□□□□ -0.33
PDGFC-206ENST00000510982 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
PDGFC-206ENST00000510982 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
PDGFC-206ENST00000510982 NUTM2AQ8IVF1 878 aaPredicted RBP12.96□□□□□ -0.33
PDGFC-206ENST00000510982 KIF1BO60333 1816 aa12.95□□□□□ -0.34
PDGFC-206ENST00000510982 NEXMIFQ5QGS0 1516 aa12.95□□□□□ -0.34
PDGFC-206ENST00000510982 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
PDGFC-206ENST00000510982 DCCP43146 1447 aa12.95□□□□□ -0.34
PDGFC-206ENST00000510982 RGL3Q3MIN7 710 aa12.94□□□□□ -0.34
PDGFC-206ENST00000510982 ZNF772Q68DY9 489 aaPredicted RBP12.94□□□□□ -0.34
PDGFC-206ENST00000510982 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
PDGFC-206ENST00000510982 DDX17Q92841 729 aaKnown RBP12.93□□□□□ -0.34
PDGFC-206ENST00000510982 MPHOSPH9Q99550 1183 aa12.93□□□□□ -0.34
PDGFC-206ENST00000510982 MST1RQ04912 1400 aa12.93□□□□□ -0.34
PDGFC-206ENST00000510982 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
PDGFC-206ENST00000510982 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
PDGFC-206ENST00000510982 ADGRL3Q9HAR2 1447 aa12.91□□□□□ -0.34
PDGFC-206ENST00000510982 LRP6O75581 1613 aa12.9□□□□□ -0.34
PDGFC-206ENST00000510982 ROBO2Q9HCK4 1378 aa12.9□□□□□ -0.34
PDGFC-206ENST00000510982 ADGRF5Q8IZF2 1346 aa12.89□□□□□ -0.35
PDGFC-206ENST00000510982 ASXL1Q8IXJ9 1541 aa12.89□□□□□ -0.35
PDGFC-206ENST00000510982 RXRBP28702 533 aa12.89□□□□□ -0.35
PDGFC-206ENST00000510982 ORAI2Q96SN7 254 aa12.89□□□□□ -0.35
PDGFC-206ENST00000510982 STK26Q9P289 416 aa12.89□□□□□ -0.35
PDGFC-206ENST00000510982 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
PDGFC-206ENST00000510982 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
PDGFC-206ENST00000510982 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
PDGFC-206ENST00000510982 PTCH1Q13635 1447 aa12.87□□□□□ -0.35
PDGFC-206ENST00000510982 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
PDGFC-206ENST00000510982 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
PDGFC-206ENST00000510982 TMEM132EQ6IEE7 984 aa12.86□□□□□ -0.35
PDGFC-206ENST00000510982 C8orf37Q96NL8 207 aa12.86□□□□□ -0.35
PDGFC-206ENST00000510982 AFF2P51816 1311 aa12.86□□□□□ -0.35
PDGFC-206ENST00000510982 ACIN1Q9UKV3 1341 aaKnown RBP12.86□□□□□ -0.35
PDGFC-206ENST00000510982 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
PDGFC-206ENST00000510982 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
PDGFC-206ENST00000510982 QTRT2Q9H974 415 aaKnown RBP12.85□□□□□ -0.35
PDGFC-206ENST00000510982 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
PDGFC-206ENST00000510982 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
PDGFC-206ENST00000510982 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
PDGFC-206ENST00000510982 PPLO60437 1756 aa12.84□□□□□ -0.35
PDGFC-206ENST00000510982 PNPLA6Q8IY17 1366 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms