RNA–Protein interactions for RNA: ENST00000510783.5

RFC1-212, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-212ENST00000510783 NECTIN2Q92692 538 aa12.41□□□□□ -0.42
RFC1-212ENST00000510783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.4□□□□□ -0.42
RFC1-212ENST00000510783 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
RFC1-212ENST00000510783 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
RFC1-212ENST00000510783 MTRQ99707 1265 aa12.39□□□□□ -0.43
RFC1-212ENST00000510783 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
RFC1-212ENST00000510783 NLRP7Q8WX94 980 aa12.33□□□□□ -0.44
RFC1-212ENST00000510783 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
RFC1-212ENST00000510783 SLC10A3P09131 477 aa12.32□□□□□ -0.44
RFC1-212ENST00000510783 COPS2P61201 443 aa12.32□□□□□ -0.44
RFC1-212ENST00000510783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
RFC1-212ENST00000510783 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
RFC1-212ENST00000510783 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
RFC1-212ENST00000510783 CFHP08603 1231 aa12.29□□□□□ -0.44
RFC1-212ENST00000510783 PCDHB3Q9Y5E6 796 aa12.29□□□□□ -0.44
RFC1-212ENST00000510783 RGS20O76081 388 aa12.28□□□□□ -0.44
RFC1-212ENST00000510783 KMT5BQ4FZB7 885 aa12.28□□□□□ -0.44
RFC1-212ENST00000510783 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
RFC1-212ENST00000510783 MAP2K5Q13163 448 aa12.27□□□□□ -0.45
RFC1-212ENST00000510783 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
RFC1-212ENST00000510783 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
RFC1-212ENST00000510783 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
RFC1-212ENST00000510783 BLOC1S3Q6QNY0 202 aa12.25□□□□□ -0.45
RFC1-212ENST00000510783 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
RFC1-212ENST00000510783 IRF6O14896 467 aa12.23□□□□□ -0.45
RFC1-212ENST00000510783 ZPR1O75312 459 aa12.23□□□□□ -0.45
RFC1-212ENST00000510783 RSPH4AQ5TD94 716 aa12.23□□□□□ -0.45
RFC1-212ENST00000510783 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
RFC1-212ENST00000510783 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
RFC1-212ENST00000510783 MINK1Q8N4C8 1332 aaPredicted RBP12.21□□□□□ -0.45
RFC1-212ENST00000510783 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.46
RFC1-212ENST00000510783 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
RFC1-212ENST00000510783 TLL1O43897 1013 aa12.17□□□□□ -0.46
RFC1-212ENST00000510783 PUS10Q3MIT2 529 aaKnown RBP12.17□□□□□ -0.46
RFC1-212ENST00000510783 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
RFC1-212ENST00000510783 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.17□□□□□ -0.46
RFC1-212ENST00000510783 NR1I2O75469 434 aa12.14□□□□□ -0.47
RFC1-212ENST00000510783 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
RFC1-212ENST00000510783 GCGRP47871 477 aa12.13□□□□□ -0.47
RFC1-212ENST00000510783 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
RFC1-212ENST00000510783 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
RFC1-212ENST00000510783 GGCXP38435 758 aa12.12□□□□□ -0.47
RFC1-212ENST00000510783 FUT2Q10981 343 aa12.12□□□□□ -0.47
RFC1-212ENST00000510783 KRI1Q8N9T8 703 aaKnown RBP12.12□□□□□ -0.47
RFC1-212ENST00000510783 ZMYND10O75800 440 aa12.11□□□□□ -0.47
RFC1-212ENST00000510783 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
RFC1-212ENST00000510783 IRX2Q9BZI1 471 aaPredicted RBP12.1□□□□□ -0.47
RFC1-212ENST00000510783 PRKD2Q9BZL6 878 aa12.1□□□□□ -0.47
RFC1-212ENST00000510783 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
RFC1-212ENST00000510783 CD46P15529 392 aa12.08□□□□□ -0.48
RFC1-212ENST00000510783 MORN1Q5T089 497 aa12.08□□□□□ -0.48
RFC1-212ENST00000510783 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
RFC1-212ENST00000510783 S1PR4O95977 384 aa12.07□□□□□ -0.48
RFC1-212ENST00000510783 ADH1BP00325 375 aa12.07□□□□□ -0.48
RFC1-212ENST00000510783 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
RFC1-212ENST00000510783 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
RFC1-212ENST00000510783 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
RFC1-212ENST00000510783 CLCN1P35523 988 aa12.04□□□□□ -0.48
RFC1-212ENST00000510783 SPSB2Q99619 263 aa12.04□□□□□ -0.48
RFC1-212ENST00000510783 SLC27A5Q9Y2P5 690 aa12.04□□□□□ -0.48
RFC1-212ENST00000510783 SLC6A16Q9GZN6 736 aa12.03□□□□□ -0.48
RFC1-212ENST00000510783 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
RFC1-212ENST00000510783 REPIN1Q9BWE0 567 aaKnown RBP12.02□□□□□ -0.49
RFC1-212ENST00000510783 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
RFC1-212ENST00000510783 THAP11Q96EK4 314 aa12.01□□□□□ -0.49
RFC1-212ENST00000510783 KDM4AO75164 1064 aa12□□□□□ -0.49
RFC1-212ENST00000510783 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
RFC1-212ENST00000510783 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
RFC1-212ENST00000510783 ANKLE1Q8NAG6 615 aa11.99□□□□□ -0.49
RFC1-212ENST00000510783 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
RFC1-212ENST00000510783 EMID1Q96A84 441 aaPredicted RBP11.97□□□□□ -0.49
RFC1-212ENST00000510783 TTLL12Q14166 644 aaPredicted RBP11.96□□□□□ -0.49
RFC1-212ENST00000510783 BRICD5Q6PL45 260 aa11.96□□□□□ -0.49
RFC1-212ENST00000510783 RNF19BQ6ZMZ0 732 aa11.96□□□□□ -0.49
RFC1-212ENST00000510783 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
RFC1-212ENST00000510783 SSTR3P32745 418 aaPredicted RBP11.95□□□□□ -0.5
RFC1-212ENST00000510783 SLC19A1P41440 591 aa11.95□□□□□ -0.5
RFC1-212ENST00000510783 AMHR2Q16671 573 aa11.95□□□□□ -0.5
RFC1-212ENST00000510783 FAM160A2Q8N612 972 aaPredicted RBP11.95□□□□□ -0.5
RFC1-212ENST00000510783 HLA-CQ95604 372 aa11.95□□□□□ -0.5
RFC1-212ENST00000510783 GFRA3O60609 400 aa11.93□□□□□ -0.5
RFC1-212ENST00000510783 USP46P62068 366 aa11.93□□□□□ -0.5
RFC1-212ENST00000510783 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
RFC1-212ENST00000510783 HOXA2O43364 376 aa11.92□□□□□ -0.5
RFC1-212ENST00000510783 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
RFC1-212ENST00000510783 PRDM9Q9NQV7 894 aa11.92□□□□□ -0.5
RFC1-212ENST00000510783 TRIM66O15016 1216 aa11.91□□□□□ -0.5
RFC1-212ENST00000510783 GUCA2AQ02747 115 aa11.91□□□□□ -0.5
RFC1-212ENST00000510783 Q3C1V9 767 aa11.91□□□□□ -0.5
RFC1-212ENST00000510783 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
RFC1-212ENST00000510783 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
RFC1-212ENST00000510783 AK7Q96M32 723 aa11.91□□□□□ -0.5
RFC1-212ENST00000510783 SPRYD7Q5W111 196 aa11.9□□□□□ -0.5
RFC1-212ENST00000510783 LAPTM4AQ15012 233 aa11.89□□□□□ -0.51
RFC1-212ENST00000510783 Q6ZNB5 142 aa11.89□□□□□ -0.51
RFC1-212ENST00000510783 FCF1Q9Y324 198 aaKnown RBP11.89□□□□□ -0.51
RFC1-212ENST00000510783 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
RFC1-212ENST00000510783 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
RFC1-212ENST00000510783 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
RFC1-212ENST00000510783 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms