RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PXYLP1Q8TE99 480 aa17.78■□□□□ 0.44
USP53-206ENST00000510737 NECTIN2Q92692 538 aa17.77■□□□□ 0.44
USP53-206ENST00000510737 PPP1R18Q6NYC8 613 aa17.76■□□□□ 0.43
USP53-206ENST00000510737 SMYD5Q6GMV2 418 aa17.74■□□□□ 0.43
USP53-206ENST00000510737 SLC10A3P09131 477 aa17.73■□□□□ 0.43
USP53-206ENST00000510737 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
USP53-206ENST00000510737 METTL3Q86U44 580 aaKnown RBP17.72■□□□□ 0.43
USP53-206ENST00000510737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.71■□□□□ 0.43
USP53-206ENST00000510737 GNPATO15228 680 aa17.71■□□□□ 0.43
USP53-206ENST00000510737 BLOC1S3Q6QNY0 202 aa17.7■□□□□ 0.42
USP53-206ENST00000510737 PCDHB3Q9Y5E6 796 aa17.7■□□□□ 0.42
USP53-206ENST00000510737 ZPR1O75312 459 aa17.69■□□□□ 0.42
USP53-206ENST00000510737 OATP04181 439 aa17.69■□□□□ 0.42
USP53-206ENST00000510737 CFHP08603 1231 aa17.66■□□□□ 0.42
USP53-206ENST00000510737 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.66■□□□□ 0.42
USP53-206ENST00000510737 PRR14Q9BWN1 585 aa17.65■□□□□ 0.42
USP53-206ENST00000510737 ACTN4O43707 911 aaKnown RBP17.64■□□□□ 0.41
USP53-206ENST00000510737 NLRP7Q8WX94 980 aa17.64■□□□□ 0.41
USP53-206ENST00000510737 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
USP53-206ENST00000510737 PRKD2Q9BZL6 878 aa17.63■□□□□ 0.41
USP53-206ENST00000510737 TLL1O43897 1013 aa17.62■□□□□ 0.41
USP53-206ENST00000510737 PHOX2BQ99453 314 aa17.62■□□□□ 0.41
USP53-206ENST00000510737 GPIHBP1Q8IV16 184 aa17.59■□□□□ 0.41
USP53-206ENST00000510737 KMT5BQ4FZB7 885 aa17.58■□□□□ 0.4
USP53-206ENST00000510737 EMID1Q96A84 441 aaPredicted RBP17.51■□□□□ 0.39
USP53-206ENST00000510737 DAXXQ9UER7 740 aaPredicted RBP17.51■□□□□ 0.39
USP53-206ENST00000510737 V9GY48 417 aaPredicted RBP17.51■□□□□ 0.39
USP53-206ENST00000510737 RNF223E7ERA6 249 aa17.5■□□□□ 0.39
USP53-206ENST00000510737 PUS10Q3MIT2 529 aaKnown RBP17.5■□□□□ 0.39
USP53-206ENST00000510737 TMUB1Q9BVT8 246 aa17.49■□□□□ 0.39
USP53-206ENST00000510737 GGCXP38435 758 aa17.48■□□□□ 0.39
USP53-206ENST00000510737 LCE2BO14633 110 aa17.47■□□□□ 0.39
USP53-206ENST00000510737 Q6ZNB5 142 aa17.46■□□□□ 0.39
USP53-206ENST00000510737 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
USP53-206ENST00000510737 PPEF1O14829 653 aaPredicted RBP17.45■□□□□ 0.38
USP53-206ENST00000510737 GFRA3O60609 400 aa17.45■□□□□ 0.38
USP53-206ENST00000510737 S1PR4O95977 384 aa17.45■□□□□ 0.38
USP53-206ENST00000510737 SCUBE3Q8IX30 993 aa17.44■□□□□ 0.38
USP53-206ENST00000510737 RDH13Q8NBN7 331 aa17.43■□□□□ 0.38
USP53-206ENST00000510737 NR1I2O75469 434 aa17.42■□□□□ 0.38
USP53-206ENST00000510737 ADH1BP00325 375 aa17.41■□□□□ 0.38
USP53-206ENST00000510737 FUT2Q10981 343 aa17.39■□□□□ 0.37
USP53-206ENST00000510737 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.37
USP53-206ENST00000510737 GCGRP47871 477 aa17.37■□□□□ 0.37
USP53-206ENST00000510737 MAP2K5Q13163 448 aa17.37■□□□□ 0.37
USP53-206ENST00000510737 LAPTM4AQ15012 233 aa17.37■□□□□ 0.37
USP53-206ENST00000510737 MORN1Q5T089 497 aa17.37■□□□□ 0.37
USP53-206ENST00000510737 ANKLE1Q8NAG6 615 aa17.36■□□□□ 0.37
USP53-206ENST00000510737 NRG2O14511 850 aaPredicted RBP17.33■□□□□ 0.36
USP53-206ENST00000510737 IRF6O14896 467 aa17.33■□□□□ 0.36
USP53-206ENST00000510737 SLC19A1P41440 591 aa17.33■□□□□ 0.36
USP53-206ENST00000510737 PLA2G2CQ5R387 149 aa17.33■□□□□ 0.36
USP53-206ENST00000510737 LIAT1Q6ZQX7 453 aa17.33■□□□□ 0.36
USP53-206ENST00000510737 TRIM67Q6ZTA4 783 aa17.33■□□□□ 0.36
USP53-206ENST00000510737 THAP11Q96EK4 314 aa17.32■□□□□ 0.36
USP53-206ENST00000510737 SLC6A16Q9GZN6 736 aa17.32■□□□□ 0.36
USP53-206ENST00000510737 SULF1Q8IWU6 871 aa17.31■□□□□ 0.36
USP53-206ENST00000510737 SPSB2Q99619 263 aa17.31■□□□□ 0.36
USP53-206ENST00000510737 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
USP53-206ENST00000510737 SLC27A5Q9Y2P5 690 aa17.3■□□□□ 0.36
USP53-206ENST00000510737 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
USP53-206ENST00000510737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.29■□□□□ 0.36
USP53-206ENST00000510737 SPRYD7Q5W111 196 aa17.28■□□□□ 0.36
USP53-206ENST00000510737 TULP1O00294 542 aaPredicted RBP17.27■□□□□ 0.36
USP53-206ENST00000510737 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
USP53-206ENST00000510737 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
USP53-206ENST00000510737 CD46P15529 392 aa17.25■□□□□ 0.35
USP53-206ENST00000510737 FAM160A2Q8N612 972 aaPredicted RBP17.25■□□□□ 0.35
USP53-206ENST00000510737 TRAF7Q6Q0C0 670 aa17.24■□□□□ 0.35
USP53-206ENST00000510737 MDM2Q00987 491 aaPredicted RBP17.23■□□□□ 0.35
USP53-206ENST00000510737 ZNF598Q86UK7 904 aaKnown RBP17.21■□□□□ 0.35
USP53-206ENST00000510737 BRICD5Q6PL45 260 aa17.2■□□□□ 0.34
USP53-206ENST00000510737 RNF19BQ6ZMZ0 732 aa17.2■□□□□ 0.34
USP53-206ENST00000510737 PRDM9Q9NQV7 894 aa17.2■□□□□ 0.34
USP53-206ENST00000510737 FMNL1O95466 1100 aaPredicted RBP17.17■□□□□ 0.34
USP53-206ENST00000510737 ZNF697Q5TEC3 545 aa17.16■□□□□ 0.34
USP53-206ENST00000510737 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
USP53-206ENST00000510737 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
USP53-206ENST00000510737 HLA-CQ95604 372 aa17.15■□□□□ 0.34
USP53-206ENST00000510737 GDF9O60383 454 aa17.13■□□□□ 0.33
USP53-206ENST00000510737 FCF1Q9Y324 198 aaKnown RBP17.13■□□□□ 0.33
USP53-206ENST00000510737 REPIN1Q9BWE0 567 aaKnown RBP17.12■□□□□ 0.33
USP53-206ENST00000510737 KDM4AO75164 1064 aa17.11■□□□□ 0.33
USP53-206ENST00000510737 PRR20EP86478 221 aa17.11■□□□□ 0.33
USP53-206ENST00000510737 PRR20CP86479 221 aa17.11■□□□□ 0.33
USP53-206ENST00000510737 PRR20DP86480 221 aa17.11■□□□□ 0.33
USP53-206ENST00000510737 PRR20BP86481 221 aa17.11■□□□□ 0.33
USP53-206ENST00000510737 PRR20AP86496 221 aa17.11■□□□□ 0.33
USP53-206ENST00000510737 TNFRSF10AO00220 468 aa17.09■□□□□ 0.33
USP53-206ENST00000510737 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
USP53-206ENST00000510737 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.32
USP53-206ENST00000510737 GRIPAP1Q4V328 841 aa17.07■□□□□ 0.32
USP53-206ENST00000510737 MSS51Q4VC12 460 aa17.07■□□□□ 0.32
USP53-206ENST00000510737 PKD2L1Q9P0L9 805 aa17.06■□□□□ 0.32
USP53-206ENST00000510737 CLCN1P35523 988 aa17.04■□□□□ 0.32
USP53-206ENST00000510737 HOXA2O43364 376 aa17.03■□□□□ 0.32
USP53-206ENST00000510737 ZMYND10O75800 440 aa17.03■□□□□ 0.32
USP53-206ENST00000510737 GUCA2AQ02747 115 aa17.03■□□□□ 0.32
USP53-206ENST00000510737 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
USP53-206ENST00000510737 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms