RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 PPP4CP60510 307 aa8.92□□□□□ -0.98
CAST-229ENST00000510098 TMEM134Q9H6X4 195 aa8.92□□□□□ -0.98
CAST-229ENST00000510098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.91□□□□□ -0.98
CAST-229ENST00000510098 MAP2K5Q13163 448 aa8.91□□□□□ -0.98
CAST-229ENST00000510098 ZC3H15Q8WU90 426 aaKnown RBP8.91□□□□□ -0.98
CAST-229ENST00000510098 PHOX2BQ99453 314 aa8.91□□□□□ -0.98
CAST-229ENST00000510098 IRF6O14896 467 aa8.9□□□□□ -0.98
CAST-229ENST00000510098 NLRP7Q8WX94 980 aa8.9□□□□□ -0.98
CAST-229ENST00000510098 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
CAST-229ENST00000510098 MINK1Q8N4C8 1332 aaPredicted RBP8.89□□□□□ -0.99
CAST-229ENST00000510098 ZMYND10O75800 440 aa8.88□□□□□ -0.99
CAST-229ENST00000510098 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
CAST-229ENST00000510098 KCNC4Q03721 635 aa8.88□□□□□ -0.99
CAST-229ENST00000510098 BARGINQ6ZT62 677 aa8.87□□□□□ -0.99
CAST-229ENST00000510098 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
CAST-229ENST00000510098 KRI1Q8N9T8 703 aaKnown RBP8.86□□□□□ -0.99
CAST-229ENST00000510098 CCDC102AQ96A19 550 aa8.86□□□□□ -0.99
CAST-229ENST00000510098 APLP1P51693 650 aa8.84□□□□□ -0.99
CAST-229ENST00000510098 SLC10A3P09131 477 aa8.83□□□□□ -1
CAST-229ENST00000510098 NECTIN2Q92692 538 aa8.83□□□□□ -1
CAST-229ENST00000510098 DAXXQ9UER7 740 aaPredicted RBP8.83□□□□□ -1
CAST-229ENST00000510098 MDM2Q00987 491 aaPredicted RBP8.8□□□□□ -1
CAST-229ENST00000510098 MTRQ99707 1265 aa8.8□□□□□ -1
CAST-229ENST00000510098 DDX11L8A8MPP1 907 aa8.8□□□□□ -1
CAST-229ENST00000510098 CFHP08603 1231 aa8.8□□□□□ -1
CAST-229ENST00000510098 IL21Q9HBE4 155 aa8.8□□□□□ -1
CAST-229ENST00000510098 TPRNQ4KMQ1 711 aa8.78□□□□□ -1
CAST-229ENST00000510098 RSPH4AQ5TD94 716 aa8.78□□□□□ -1
CAST-229ENST00000510098 RDH13Q8NBN7 331 aa8.78□□□□□ -1
CAST-229ENST00000510098 KMT5BQ4FZB7 885 aa8.77□□□□□ -1.01
CAST-229ENST00000510098 SULF1Q8IWU6 871 aa8.77□□□□□ -1.01
CAST-229ENST00000510098 PRR14Q9BWN1 585 aa8.77□□□□□ -1.01
CAST-229ENST00000510098 ACTN4O43707 911 aaKnown RBP8.76□□□□□ -1.01
CAST-229ENST00000510098 COPS2P61201 443 aa8.76□□□□□ -1.01
CAST-229ENST00000510098 PRKCSHP14314 528 aaPredicted RBP8.75□□□□□ -1.01
CAST-229ENST00000510098 ZNF516Q92618 1163 aa8.75□□□□□ -1.01
CAST-229ENST00000510098 REPIN1Q9BWE0 567 aaKnown RBP8.75□□□□□ -1.01
CAST-229ENST00000510098 PCDHB3Q9Y5E6 796 aa8.75□□□□□ -1.01
CAST-229ENST00000510098 CLCN1P35523 988 aa8.74□□□□□ -1.01
CAST-229ENST00000510098 AK7Q96M32 723 aa8.74□□□□□ -1.01
CAST-229ENST00000510098 TMUB1Q9BVT8 246 aa8.74□□□□□ -1.01
CAST-229ENST00000510098 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
CAST-229ENST00000510098 GPCPD1Q9NPB8 672 aa8.74□□□□□ -1.01
CAST-229ENST00000510098 TRIM66O15016 1216 aa8.73□□□□□ -1.01
CAST-229ENST00000510098 BLOC1S3Q6QNY0 202 aa8.73□□□□□ -1.01
CAST-229ENST00000510098 GCGRP47871 477 aa8.72□□□□□ -1.01
CAST-229ENST00000510098 AMHR2Q16671 573 aa8.72□□□□□ -1.01
CAST-229ENST00000510098 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
CAST-229ENST00000510098 CD46P15529 392 aa8.71□□□□□ -1.02
CAST-229ENST00000510098 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
CAST-229ENST00000510098 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
CAST-229ENST00000510098 ZPR1O75312 459 aa8.7□□□□□ -1.02
CAST-229ENST00000510098 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
CAST-229ENST00000510098 PPP1R18Q6NYC8 613 aa8.7□□□□□ -1.02
CAST-229ENST00000510098 FUT2Q10981 343 aa8.69□□□□□ -1.02
CAST-229ENST00000510098 NKX2-3Q8TAU0 364 aa8.69□□□□□ -1.02
CAST-229ENST00000510098 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
CAST-229ENST00000510098 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
CAST-229ENST00000510098 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
CAST-229ENST00000510098 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
CAST-229ENST00000510098 PARP9Q8IXQ6 854 aa8.67□□□□□ -1.02
CAST-229ENST00000510098 NR1I2O75469 434 aa8.66□□□□□ -1.02
CAST-229ENST00000510098 MORN1Q5T089 497 aa8.66□□□□□ -1.02
CAST-229ENST00000510098 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
CAST-229ENST00000510098 V9GY48 417 aaPredicted RBP8.66□□□□□ -1.02
CAST-229ENST00000510098 TLL1O43897 1013 aa8.65□□□□□ -1.02
CAST-229ENST00000510098 KDM4AO75164 1064 aa8.65□□□□□ -1.02
CAST-229ENST00000510098 PDE4DQ08499 809 aa8.65□□□□□ -1.02
CAST-229ENST00000510098 SLC27A5Q9Y2P5 690 aa8.63□□□□□ -1.03
CAST-229ENST00000510098 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
CAST-229ENST00000510098 MS4A1P11836 297 aa8.61□□□□□ -1.03
CAST-229ENST00000510098 GGCXP38435 758 aa8.61□□□□□ -1.03
CAST-229ENST00000510098 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
CAST-229ENST00000510098 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
CAST-229ENST00000510098 HLA-CQ95604 372 aa8.61□□□□□ -1.03
CAST-229ENST00000510098 USP46P62068 366 aa8.6□□□□□ -1.03
CAST-229ENST00000510098 LAPTM4AQ15012 233 aa8.6□□□□□ -1.03
CAST-229ENST00000510098 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
CAST-229ENST00000510098 HOXA2O43364 376 aa8.59□□□□□ -1.03
CAST-229ENST00000510098 ADH1BP00325 375 aa8.59□□□□□ -1.03
CAST-229ENST00000510098 SPIRE2Q8WWL2 714 aa8.59□□□□□ -1.03
CAST-229ENST00000510098 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
CAST-229ENST00000510098 SPSB2Q99619 263 aa8.59□□□□□ -1.03
CAST-229ENST00000510098 RNF223E7ERA6 249 aa8.57□□□□□ -1.04
CAST-229ENST00000510098 S1PR4O95977 384 aa8.57□□□□□ -1.04
CAST-229ENST00000510098 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
CAST-229ENST00000510098 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
CAST-229ENST00000510098 RNF19BQ6ZMZ0 732 aa8.57□□□□□ -1.04
CAST-229ENST00000510098 EMID1Q96A84 441 aaPredicted RBP8.57□□□□□ -1.04
CAST-229ENST00000510098 FMNL1O95466 1100 aaPredicted RBP8.56□□□□□ -1.04
CAST-229ENST00000510098 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
CAST-229ENST00000510098 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
CAST-229ENST00000510098 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
CAST-229ENST00000510098 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
CAST-229ENST00000510098 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
CAST-229ENST00000510098 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
CAST-229ENST00000510098 NDUFV2P19404 249 aa8.54□□□□□ -1.04
CAST-229ENST00000510098 Q3C1V9 767 aa8.54□□□□□ -1.04
CAST-229ENST00000510098 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
CAST-229ENST00000510098 NRG2O14511 850 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms