RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 ZCCHC11Q5TAX3 1644 aaKnown RBP8.29□□□□□ -1.08
NEK1-204ENST00000509912 REREQ9P2R6 1566 aa8.29□□□□□ -1.08
NEK1-204ENST00000509912 DDRGK1Q96HY6 314 aa8.29□□□□□ -1.08
NEK1-204ENST00000509912 PROCA1Q8NCQ7 364 aaPredicted RBP8.28□□□□□ -1.08
NEK1-204ENST00000509912 EPRSP07814 1512 aaKnown RBP8.28□□□□□ -1.08
NEK1-204ENST00000509912 NEO1Q92859 1461 aa8.28□□□□□ -1.08
NEK1-204ENST00000509912 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
NEK1-204ENST00000509912 RBM33Q96EV2 1170 aaKnown RBP8.28□□□□□ -1.08
NEK1-204ENST00000509912 ATN1P54259 1190 aaPredicted RBP8.27□□□□□ -1.09
NEK1-204ENST00000509912 AMHR2Q16671 573 aa8.27□□□□□ -1.09
NEK1-204ENST00000509912 FAM135AQ9P2D6 1515 aa8.27□□□□□ -1.09
NEK1-204ENST00000509912 SPDYE16A6NNV3 312 aaPredicted RBP8.26□□□□□ -1.09
NEK1-204ENST00000509912 ILDR1Q86SU0 546 aaPredicted RBP8.26□□□□□ -1.09
NEK1-204ENST00000509912 ZMYM4Q5VZL5 1548 aa8.26□□□□□ -1.09
NEK1-204ENST00000509912 EVX2Q03828 476 aa8.26□□□□□ -1.09
NEK1-204ENST00000509912 PTPRGP23470 1445 aa8.26□□□□□ -1.09
NEK1-204ENST00000509912 HIC1Q14526 733 aa8.25□□□□□ -1.09
NEK1-204ENST00000509912 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
NEK1-204ENST00000509912 FBXO31Q5XUX0 539 aaPredicted RBP8.25□□□□□ -1.09
NEK1-204ENST00000509912 NPM2Q86SE8 214 aaKnown RBP8.25□□□□□ -1.09
NEK1-204ENST00000509912 PTGDRQ13258 359 aa8.25□□□□□ -1.09
NEK1-204ENST00000509912 MAGI2Q86UL8 1455 aa8.24□□□□□ -1.09
NEK1-204ENST00000509912 WDR7Q9Y4E6 1490 aa8.24□□□□□ -1.09
NEK1-204ENST00000509912 KIF3CO14782 793 aa8.23□□□□□ -1.09
NEK1-204ENST00000509912 MCM6Q14566 821 aa8.23□□□□□ -1.09
NEK1-204ENST00000509912 BOLA1Q9Y3E2 137 aa8.23□□□□□ -1.09
NEK1-204ENST00000509912 KDM6BO15054 1643 aa8.22□□□□□ -1.09
NEK1-204ENST00000509912 TIE1P35590 1138 aa8.22□□□□□ -1.09
NEK1-204ENST00000509912 FCHSD2O94868 740 aa8.22□□□□□ -1.09
NEK1-204ENST00000509912 RAPGEF6Q8TEU7 1601 aa8.21□□□□□ -1.09
NEK1-204ENST00000509912 TRAK2O60296 914 aa8.21□□□□□ -1.1
NEK1-204ENST00000509912 EVI5O60447 810 aa8.21□□□□□ -1.1
NEK1-204ENST00000509912 RANGAP1P46060 587 aaPredicted RBP8.2□□□□□ -1.1
NEK1-204ENST00000509912 MAP3K7O43318 606 aa8.2□□□□□ -1.1
NEK1-204ENST00000509912 NPDC1Q9NQX5 325 aaPredicted RBP8.2□□□□□ -1.1
NEK1-204ENST00000509912 ASXL2Q76L83 1435 aa8.19□□□□□ -1.1
NEK1-204ENST00000509912 PDIA4P13667 645 aaKnown RBP8.19□□□□□ -1.1
NEK1-204ENST00000509912 BEGAINQ9BUH8 593 aa8.19□□□□□ -1.1
NEK1-204ENST00000509912 COLQQ9Y215 455 aaPredicted RBP8.18□□□□□ -1.1
NEK1-204ENST00000509912 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
NEK1-204ENST00000509912 IRX5P78411 483 aaPredicted RBP8.17□□□□□ -1.1
NEK1-204ENST00000509912 AEBP1Q8IUX7 1158 aa8.17□□□□□ -1.1
NEK1-204ENST00000509912 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
NEK1-204ENST00000509912 BCORL1Q5H9F3 1711 aa8.17□□□□□ -1.1
NEK1-204ENST00000509912 FLIIQ13045 1269 aa8.17□□□□□ -1.1
NEK1-204ENST00000509912 FHOD3Q2V2M9 1422 aa8.17□□□□□ -1.1
NEK1-204ENST00000509912 ADAMTSL3P82987 1691 aa8.17□□□□□ -1.1
NEK1-204ENST00000509912 SNRKQ9NRH2 765 aa8.16□□□□□ -1.1
NEK1-204ENST00000509912 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
NEK1-204ENST00000509912 CSPP1Q1MSJ5 1256 aa8.15□□□□□ -1.1
NEK1-204ENST00000509912 CARNS1A5YM72 827 aa8.14□□□□□ -1.11
NEK1-204ENST00000509912 C19orf67A6NJJ6 358 aa8.14□□□□□ -1.11
NEK1-204ENST00000509912 G3V3G9 751 aa8.14□□□□□ -1.11
NEK1-204ENST00000509912 TMEM121BQ9BXQ6 578 aaPredicted RBP8.14□□□□□ -1.11
NEK1-204ENST00000509912 AGLP35573 1532 aa8.14□□□□□ -1.11
NEK1-204ENST00000509912 HECW1Q76N89 1606 aa8.13□□□□□ -1.11
NEK1-204ENST00000509912 MAP3K1Q13233 1512 aa8.13□□□□□ -1.11
NEK1-204ENST00000509912 OCEL1Q9H607 264 aa8.13□□□□□ -1.11
NEK1-204ENST00000509912 PROSER2Q86WR7 435 aaPredicted RBP8.13□□□□□ -1.11
NEK1-204ENST00000509912 RICTORQ6R327 1708 aa8.13□□□□□ -1.11
NEK1-204ENST00000509912 FAM9AQ8IZU1 332 aaPredicted RBP8.12□□□□□ -1.11
NEK1-204ENST00000509912 CCDC18Q5T9S5 1454 aa8.12□□□□□ -1.11
NEK1-204ENST00000509912 PELP1Q8IZL8 1130 aaKnown RBP8.12□□□□□ -1.11
NEK1-204ENST00000509912 ATP10BO94823 1461 aa8.12□□□□□ -1.11
NEK1-204ENST00000509912 TBC1D12O60347 775 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 ZNF428Q96B54 188 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 GPCPD1Q9NPB8 672 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 PCDHGA10Q9Y5H3 936 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 KDM5CP41229 1560 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 MROH2AA6NES4 1674 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 FMN1Q68DA7 1419 aa8.11□□□□□ -1.11
NEK1-204ENST00000509912 FRMPD1Q5SYB0 1578 aa8.1□□□□□ -1.11
NEK1-204ENST00000509912 ATMINO43313 823 aaPredicted RBP8.1□□□□□ -1.11
NEK1-204ENST00000509912 GDPD2Q9HCC8 539 aa8.1□□□□□ -1.11
NEK1-204ENST00000509912 HAX1O00165 279 aa8.1□□□□□ -1.11
NEK1-204ENST00000509912 MYSM1Q5VVJ2 828 aa8.1□□□□□ -1.11
NEK1-204ENST00000509912 METTL3Q86U44 580 aaKnown RBP8.09□□□□□ -1.11
NEK1-204ENST00000509912 ZBTB7CA1YPR0 619 aa8.09□□□□□ -1.11
NEK1-204ENST00000509912 PLCG2P16885 1265 aa8.09□□□□□ -1.11
NEK1-204ENST00000509912 FAM69CQ0P6D2 419 aa8.09□□□□□ -1.11
NEK1-204ENST00000509912 IQSEC2Q5JU85 1478 aa8.09□□□□□ -1.11
NEK1-204ENST00000509912 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
NEK1-204ENST00000509912 LIMD1Q9UGP4 676 aa8.09□□□□□ -1.11
NEK1-204ENST00000509912 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
NEK1-204ENST00000509912 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
NEK1-204ENST00000509912 FNBP4Q8N3X1 1017 aaPredicted RBP8.08□□□□□ -1.12
NEK1-204ENST00000509912 KCTD17Q8N5Z5 321 aa8.08□□□□□ -1.12
NEK1-204ENST00000509912 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
NEK1-204ENST00000509912 TSPOAP1O95153 1857 aa8.08□□□□□ -1.12
NEK1-204ENST00000509912 PTGER2P43116 358 aa8.08□□□□□ -1.12
NEK1-204ENST00000509912 PADI6Q6TGC4 694 aa8.08□□□□□ -1.12
NEK1-204ENST00000509912 NUP153P49790 1475 aaKnown RBP8.08□□□□□ -1.12
NEK1-204ENST00000509912 A6NJR5 290 aa8.07□□□□□ -1.12
NEK1-204ENST00000509912 CLCN1P35523 988 aa8.07□□□□□ -1.12
NEK1-204ENST00000509912 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
NEK1-204ENST00000509912 POM121CA8CG34 1229 aa8.07□□□□□ -1.12
NEK1-204ENST00000509912 TMUB1Q9BVT8 246 aa8.07□□□□□ -1.12
NEK1-204ENST00000509912 FAM217BQ9NTX9 383 aaPredicted RBP8.07□□□□□ -1.12
NEK1-204ENST00000509912 TTC37Q6PGP7 1564 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms