RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 ADGRF5Q8IZF2 1346 aa17.7■□□□□ 0.42
LYSMD3-204ENST00000509384 NRXN1Q9ULB1 1477 aa17.7■□□□□ 0.42
LYSMD3-204ENST00000509384 LAMC1P11047 1609 aa17.69■□□□□ 0.42
LYSMD3-204ENST00000509384 TNRQ92752 1358 aa17.69■□□□□ 0.42
LYSMD3-204ENST00000509384 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
LYSMD3-204ENST00000509384 TMEM131LA2VDJ0 1609 aa17.69■□□□□ 0.42
LYSMD3-204ENST00000509384 NEXMIFQ5QGS0 1516 aa17.68■□□□□ 0.42
LYSMD3-204ENST00000509384 FER1L4A9Z1Z3 1794 aa17.67■□□□□ 0.42
LYSMD3-204ENST00000509384 PPLO60437 1756 aa17.66■□□□□ 0.42
LYSMD3-204ENST00000509384 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
LYSMD3-204ENST00000509384 VGFO15240 615 aaPredicted RBP17.65■□□□□ 0.42
LYSMD3-204ENST00000509384 A2ML1A8K2U0 1454 aa17.64■□□□□ 0.41
LYSMD3-204ENST00000509384 KIAA1210Q9ULL0 1709 aa17.64■□□□□ 0.41
LYSMD3-204ENST00000509384 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
LYSMD3-204ENST00000509384 WASHC2AQ641Q2 1341 aa17.63■□□□□ 0.41
LYSMD3-204ENST00000509384 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
LYSMD3-204ENST00000509384 ZFYVE9O95405 1425 aa17.62■□□□□ 0.41
LYSMD3-204ENST00000509384 CEBPAP49715 358 aaPredicted RBP17.62■□□□□ 0.41
LYSMD3-204ENST00000509384 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
LYSMD3-204ENST00000509384 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
LYSMD3-204ENST00000509384 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
LYSMD3-204ENST00000509384 NLRP1Q9C000 1473 aa17.61■□□□□ 0.41
LYSMD3-204ENST00000509384 C3P01024 1663 aa17.61■□□□□ 0.41
LYSMD3-204ENST00000509384 SCAF11Q99590 1463 aaKnown RBP17.61■□□□□ 0.41
LYSMD3-204ENST00000509384 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
LYSMD3-204ENST00000509384 RIMS2Q9UQ26 1411 aa17.59■□□□□ 0.41
LYSMD3-204ENST00000509384 KIF7Q2M1P5 1343 aa17.59■□□□□ 0.41
LYSMD3-204ENST00000509384 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.41
LYSMD3-204ENST00000509384 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.41
LYSMD3-204ENST00000509384 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.41
LYSMD3-204ENST00000509384 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.4
LYSMD3-204ENST00000509384 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
LYSMD3-204ENST00000509384 IQGAP1P46940 1657 aa17.56■□□□□ 0.4
LYSMD3-204ENST00000509384 ADAMTSL3P82987 1691 aa17.56■□□□□ 0.4
LYSMD3-204ENST00000509384 RIMS1Q86UR5 1692 aaKnown RBP17.56■□□□□ 0.4
LYSMD3-204ENST00000509384 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
LYSMD3-204ENST00000509384 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
LYSMD3-204ENST00000509384 MIER1Q8N108 512 aa17.54■□□□□ 0.4
LYSMD3-204ENST00000509384 ADGRB1O14514 1584 aa17.54■□□□□ 0.4
LYSMD3-204ENST00000509384 KDM4FA0A1W2PPD8 638 aa17.53■□□□□ 0.4
LYSMD3-204ENST00000509384 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
LYSMD3-204ENST00000509384 TESK2Q96S53 571 aa17.52■□□□□ 0.4
LYSMD3-204ENST00000509384 TMEM2Q9UHN6 1383 aa17.52■□□□□ 0.4
LYSMD3-204ENST00000509384 POLR1AO95602 1720 aaPredicted RBP17.52■□□□□ 0.4
LYSMD3-204ENST00000509384 UBR1Q8IWV7 1749 aa17.52■□□□□ 0.4
LYSMD3-204ENST00000509384 POLR3GLQ9BT43 218 aa17.52■□□□□ 0.39
LYSMD3-204ENST00000509384 TMF1P82094 1093 aa17.5■□□□□ 0.39
LYSMD3-204ENST00000509384 TMEM132EQ6IEE7 984 aa17.5■□□□□ 0.39
LYSMD3-204ENST00000509384 MYO3AQ8NEV4 1616 aa17.5■□□□□ 0.39
LYSMD3-204ENST00000509384 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
LYSMD3-204ENST00000509384 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
LYSMD3-204ENST00000509384 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
LYSMD3-204ENST00000509384 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
LYSMD3-204ENST00000509384 CENPJQ9HC77 1338 aaPredicted RBP17.46■□□□□ 0.39
LYSMD3-204ENST00000509384 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
LYSMD3-204ENST00000509384 THEMISQ8N1K5 641 aaPredicted RBP17.45■□□□□ 0.38
LYSMD3-204ENST00000509384 SLIT1O75093 1534 aa17.45■□□□□ 0.38
LYSMD3-204ENST00000509384 CEP170BQ9Y4F5 1589 aaPredicted RBP17.44■□□□□ 0.38
LYSMD3-204ENST00000509384 ANP32CO43423 234 aa17.44■□□□□ 0.38
LYSMD3-204ENST00000509384 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
LYSMD3-204ENST00000509384 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
LYSMD3-204ENST00000509384 SBNO2Q9Y2G9 1366 aa17.44■□□□□ 0.38
LYSMD3-204ENST00000509384 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
LYSMD3-204ENST00000509384 PTPRMP28827 1452 aa17.43■□□□□ 0.38
LYSMD3-204ENST00000509384 YTHDC2Q9H6S0 1430 aaKnown RBP17.42■□□□□ 0.38
LYSMD3-204ENST00000509384 PLEKHG1Q9ULL1 1385 aa17.42■□□□□ 0.38
LYSMD3-204ENST00000509384 TXNDC2Q86VQ3 553 aa17.42■□□□□ 0.38
LYSMD3-204ENST00000509384 BCANQ96GW7 911 aa17.42■□□□□ 0.38
LYSMD3-204ENST00000509384 NRXN3Q9Y4C0 1643 aa17.41■□□□□ 0.38
LYSMD3-204ENST00000509384 LTKP29376 864 aa17.41■□□□□ 0.38
LYSMD3-204ENST00000509384 STK26Q9P289 416 aa17.41■□□□□ 0.38
LYSMD3-204ENST00000509384 ZNF142P52746 1687 aaPredicted RBP17.39■□□□□ 0.37
LYSMD3-204ENST00000509384 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
LYSMD3-204ENST00000509384 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
LYSMD3-204ENST00000509384 ARHGEF28Q8N1W1 1705 aaKnown RBP17.38■□□□□ 0.37
LYSMD3-204ENST00000509384 QRICH2Q9H0J4 1663 aa17.37■□□□□ 0.37
LYSMD3-204ENST00000509384 METP08581 1390 aa17.37■□□□□ 0.37
LYSMD3-204ENST00000509384 ADAMTS13Q76LX8 1427 aa17.36■□□□□ 0.37
LYSMD3-204ENST00000509384 DLC1Q96QB1 1528 aa17.35■□□□□ 0.37
LYSMD3-204ENST00000509384 ABCC11Q96J66 1382 aa17.34■□□□□ 0.37
LYSMD3-204ENST00000509384 PRAM1Q96QH2 718 aa17.34■□□□□ 0.37
LYSMD3-204ENST00000509384 POGKQ9P215 609 aa17.34■□□□□ 0.37
LYSMD3-204ENST00000509384 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.37
LYSMD3-204ENST00000509384 SAFB2Q14151 953 aaKnown RBP eCLIP17.32■□□□□ 0.36
LYSMD3-204ENST00000509384 MED14O60244 1454 aa17.32■□□□□ 0.36
LYSMD3-204ENST00000509384 EVC2Q86UK5 1308 aa17.31■□□□□ 0.36
LYSMD3-204ENST00000509384 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
LYSMD3-204ENST00000509384 DIP2AQ14689 1571 aa17.31■□□□□ 0.36
LYSMD3-204ENST00000509384 TECPR2O15040 1411 aa17.3■□□□□ 0.36
LYSMD3-204ENST00000509384 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
LYSMD3-204ENST00000509384 CCER2I3L3R5 266 aa17.3■□□□□ 0.36
LYSMD3-204ENST00000509384 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
LYSMD3-204ENST00000509384 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
LYSMD3-204ENST00000509384 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
LYSMD3-204ENST00000509384 PANK3Q9H999 370 aa17.29■□□□□ 0.36
LYSMD3-204ENST00000509384 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
LYSMD3-204ENST00000509384 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
LYSMD3-204ENST00000509384 CPS1P31327 1500 aa17.28■□□□□ 0.36
LYSMD3-204ENST00000509384 KNDC1Q76NI1 1749 aa17.28■□□□□ 0.36
LYSMD3-204ENST00000509384 SIRT1Q96EB6 747 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms