RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 TATDN2Q93075 761 aa9.05□□□□□ -0.96
TRAPPC13-210ENST00000509234 NBPF26B4DH59 902 aa9.04□□□□□ -0.96
TRAPPC13-210ENST00000509234 RGS20O76081 388 aa9.04□□□□□ -0.96
TRAPPC13-210ENST00000509234 SSTR3P32745 418 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC13-210ENST00000509234 NUDT18Q6ZVK8 323 aa9.04□□□□□ -0.96
TRAPPC13-210ENST00000509234 DMRTA1Q5VZB9 504 aa9.03□□□□□ -0.96
TRAPPC13-210ENST00000509234 TK2O00142 265 aa9.02□□□□□ -0.97
TRAPPC13-210ENST00000509234 PACS2Q86VP3 889 aa9.02□□□□□ -0.97
TRAPPC13-210ENST00000509234 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.97
TRAPPC13-210ENST00000509234 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
TRAPPC13-210ENST00000509234 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
TRAPPC13-210ENST00000509234 HRO43593 1189 aa9.01□□□□□ -0.97
TRAPPC13-210ENST00000509234 DNAJB2P25686 324 aa9.01□□□□□ -0.97
TRAPPC13-210ENST00000509234 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
TRAPPC13-210ENST00000509234 SH3D19Q5HYK7 790 aa9□□□□□ -0.97
TRAPPC13-210ENST00000509234 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
TRAPPC13-210ENST00000509234 CD46P15529 392 aa8.99□□□□□ -0.97
TRAPPC13-210ENST00000509234 PTPN5P54829 565 aa8.99□□□□□ -0.97
TRAPPC13-210ENST00000509234 KCNH8Q96L42 1107 aa8.99□□□□□ -0.97
TRAPPC13-210ENST00000509234 VPS9D1Q9Y2B5 631 aa8.99□□□□□ -0.97
TRAPPC13-210ENST00000509234 CCDC180Q9P1Z9 1646 aa8.98□□□□□ -0.97
TRAPPC13-210ENST00000509234 BHMG1C9JSJ3 638 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC13-210ENST00000509234 SMAPO00193 183 aa8.98□□□□□ -0.97
TRAPPC13-210ENST00000509234 BEGAINQ9BUH8 593 aa8.98□□□□□ -0.97
TRAPPC13-210ENST00000509234 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
TRAPPC13-210ENST00000509234 ERICH6Q7L0X2 663 aa8.94□□□□□ -0.98
TRAPPC13-210ENST00000509234 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRAPPC13-210ENST00000509234 MYSM1Q5VVJ2 828 aa8.93□□□□□ -0.98
TRAPPC13-210ENST00000509234 SULF1Q8IWU6 871 aa8.93□□□□□ -0.98
TRAPPC13-210ENST00000509234 FAM98CQ17RN3 349 aaKnown RBP8.92□□□□□ -0.98
TRAPPC13-210ENST00000509234 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
TRAPPC13-210ENST00000509234 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
TRAPPC13-210ENST00000509234 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
TRAPPC13-210ENST00000509234 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
TRAPPC13-210ENST00000509234 TBC1D2Q9BYX2 928 aa8.91□□□□□ -0.98
TRAPPC13-210ENST00000509234 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-210ENST00000509234 SLC10A3P09131 477 aa8.9□□□□□ -0.98
TRAPPC13-210ENST00000509234 TUSC1Q2TAM9 212 aa8.9□□□□□ -0.98
TRAPPC13-210ENST00000509234 A0A0G2JS52 829 aa8.89□□□□□ -0.99
TRAPPC13-210ENST00000509234 DIXDC1Q155Q3 683 aa8.89□□□□□ -0.99
TRAPPC13-210ENST00000509234 SWT1Q5T5J6 900 aaKnown RBP8.89□□□□□ -0.99
TRAPPC13-210ENST00000509234 Q6ZNB5 142 aa8.89□□□□□ -0.99
TRAPPC13-210ENST00000509234 ABCC9O60706 1549 aa8.89□□□□□ -0.99
TRAPPC13-210ENST00000509234 DDX11L8A8MPP1 907 aa8.88□□□□□ -0.99
TRAPPC13-210ENST00000509234 GJA5P36382 358 aa8.88□□□□□ -0.99
TRAPPC13-210ENST00000509234 PCMTD1Q96MG8 357 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC13-210ENST00000509234 GCGRP47871 477 aa8.87□□□□□ -0.99
TRAPPC13-210ENST00000509234 FBXO31Q5XUX0 539 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC13-210ENST00000509234 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC13-210ENST00000509234 NBPF3Q9H094 633 aa8.87□□□□□ -0.99
TRAPPC13-210ENST00000509234 SPTLC1O15269 473 aa8.86□□□□□ -0.99
TRAPPC13-210ENST00000509234 CLK2P49760 499 aaKnown RBP8.86□□□□□ -0.99
TRAPPC13-210ENST00000509234 LIMD1Q9UGP4 676 aa8.86□□□□□ -0.99
TRAPPC13-210ENST00000509234 PPP2R2DQ66LE6 453 aa8.85□□□□□ -0.99
TRAPPC13-210ENST00000509234 RSBN1LQ6PCB5 846 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC13-210ENST00000509234 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
TRAPPC13-210ENST00000509234 SAMD7Q7Z3H4 446 aa8.84□□□□□ -0.99
TRAPPC13-210ENST00000509234 MOXD2PA6NHM9 499 aa8.83□□□□□ -1
TRAPPC13-210ENST00000509234 POLR3EQ9NVU0 708 aa8.83□□□□□ -1
TRAPPC13-210ENST00000509234 KDM4AO75164 1064 aa8.82□□□□□ -1
TRAPPC13-210ENST00000509234 USP46P62068 366 aa8.82□□□□□ -1
TRAPPC13-210ENST00000509234 RIC3Q7Z5B4 369 aa8.82□□□□□ -1
TRAPPC13-210ENST00000509234 C14orf37Q86TY3 774 aa8.82□□□□□ -1
TRAPPC13-210ENST00000509234 SLF2Q8IX21 1173 aa8.82□□□□□ -1
TRAPPC13-210ENST00000509234 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
TRAPPC13-210ENST00000509234 HOXA2O43364 376 aa8.81□□□□□ -1
TRAPPC13-210ENST00000509234 RDH13Q8NBN7 331 aa8.81□□□□□ -1
TRAPPC13-210ENST00000509234 THSD4Q6ZMP0 1018 aa8.8□□□□□ -1
TRAPPC13-210ENST00000509234 NUTM1Q86Y26 1132 aa8.8□□□□□ -1
TRAPPC13-210ENST00000509234 MRPL50Q8N5N7 158 aaKnown RBP8.8□□□□□ -1
TRAPPC13-210ENST00000509234 LILRB3O75022 631 aa8.79□□□□□ -1
TRAPPC13-210ENST00000509234 NDUFV2P19404 249 aa8.79□□□□□ -1
TRAPPC13-210ENST00000509234 FLIIQ13045 1269 aa8.79□□□□□ -1
TRAPPC13-210ENST00000509234 RSPH4AQ5TD94 716 aa8.79□□□□□ -1
TRAPPC13-210ENST00000509234 WNT2BQ93097 391 aa8.78□□□□□ -1
TRAPPC13-210ENST00000509234 PCDHB15Q9Y5E8 787 aa8.78□□□□□ -1
TRAPPC13-210ENST00000509234 RFC5P40937 340 aa8.77□□□□□ -1.01
TRAPPC13-210ENST00000509234 MCM6Q14566 821 aa8.77□□□□□ -1.01
TRAPPC13-210ENST00000509234 PRPF38BQ5VTL8 546 aaKnown RBP8.77□□□□□ -1.01
TRAPPC13-210ENST00000509234 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
TRAPPC13-210ENST00000509234 SOWAHBA6NEL2 793 aa8.76□□□□□ -1.01
TRAPPC13-210ENST00000509234 CFHP08603 1231 aa8.76□□□□□ -1.01
TRAPPC13-210ENST00000509234 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
TRAPPC13-210ENST00000509234 QPCTQ16769 361 aa8.76□□□□□ -1.01
TRAPPC13-210ENST00000509234 FUT2Q10981 343 aa8.75□□□□□ -1.01
TRAPPC13-210ENST00000509234 BANK1Q8NDB2 785 aa8.75□□□□□ -1.01
TRAPPC13-210ENST00000509234 HLA-CQ95604 372 aa8.75□□□□□ -1.01
TRAPPC13-210ENST00000509234 LRCH3Q96II8 777 aa8.75□□□□□ -1.01
TRAPPC13-210ENST00000509234 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC13-210ENST00000509234 SOCS7O14512 581 aa8.74□□□□□ -1.01
TRAPPC13-210ENST00000509234 ACTN4O43707 911 aaKnown RBP8.74□□□□□ -1.01
TRAPPC13-210ENST00000509234 FDX1P10109 184 aa8.73□□□□□ -1.01
TRAPPC13-210ENST00000509234 SLC4A3P48751 1232 aa8.73□□□□□ -1.01
TRAPPC13-210ENST00000509234 NECTIN2Q92692 538 aa8.73□□□□□ -1.01
TRAPPC13-210ENST00000509234 ZMYND15Q9H091 742 aa8.73□□□□□ -1.01
TRAPPC13-210ENST00000509234 SPDYE5A6NIY4 337 aa8.72□□□□□ -1.01
TRAPPC13-210ENST00000509234 HRCP23327 699 aa8.72□□□□□ -1.01
TRAPPC13-210ENST00000509234 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
TRAPPC13-210ENST00000509234 GUCA2AQ02747 115 aa8.72□□□□□ -1.01
TRAPPC13-210ENST00000509234 RTL5Q5HYW3 569 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms