RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 SYCP2Q9BX26 1530 aa6.29□□□□□ -1.4
RNF4-211ENST00000509206 CCNB3Q8WWL7 1395 aa6.29□□□□□ -1.4
RNF4-211ENST00000509206 STRCP1A6NGW2 1772 aa6.29□□□□□ -1.4
RNF4-211ENST00000509206 SCAF11Q99590 1463 aaKnown RBP6.28□□□□□ -1.4
RNF4-211ENST00000509206 FGD6Q6ZV73 1430 aa6.28□□□□□ -1.4
RNF4-211ENST00000509206 ATF3P18847 181 aa6.28□□□□□ -1.4
RNF4-211ENST00000509206 SF3B2Q13435 895 aaKnown RBP6.28□□□□□ -1.4
RNF4-211ENST00000509206 PREX2Q70Z35 1606 aa6.28□□□□□ -1.4
RNF4-211ENST00000509206 PHLPP1O60346 1717 aa6.28□□□□□ -1.4
RNF4-211ENST00000509206 TSPY4P0CV99 314 aa6.27□□□□□ -1.41
RNF4-211ENST00000509206 TSPY10P0CW01 314 aa6.27□□□□□ -1.41
RNF4-211ENST00000509206 YY1P25490 414 aa6.27□□□□□ -1.41
RNF4-211ENST00000509206 PLXNC1O60486 1568 aa6.27□□□□□ -1.41
RNF4-211ENST00000509206 LRP6O75581 1613 aa6.26□□□□□ -1.41
RNF4-211ENST00000509206 IFFO2Q5TF58 517 aa6.26□□□□□ -1.41
RNF4-211ENST00000509206 CADPS2Q86UW7 1296 aa6.26□□□□□ -1.41
RNF4-211ENST00000509206 RGS12O14924 1447 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 ADAMTS2O95450 1211 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 RSPH4AQ5TD94 716 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 REM2Q8IYK8 340 aaPredicted RBP6.25□□□□□ -1.41
RNF4-211ENST00000509206 LRRC59Q96AG4 307 aaKnown RBP6.25□□□□□ -1.41
RNF4-211ENST00000509206 TRPC5Q9UL62 973 aaPredicted RBP6.25□□□□□ -1.41
RNF4-211ENST00000509206 SSUH2Q9Y2M2 353 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 CCDC18Q5T9S5 1454 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 SETBP1Q9Y6X0 1596 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 GPATCH8Q9UKJ3 1502 aaKnown RBP6.25□□□□□ -1.41
RNF4-211ENST00000509206 RTEL1-TNFRSF6BF6WH68 1400 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 EEA1Q15075 1411 aa6.25□□□□□ -1.41
RNF4-211ENST00000509206 ZNF644Q9H582 1327 aaPredicted RBP6.25□□□□□ -1.41
RNF4-211ENST00000509206 ADGBQ8N7X0 1667 aa6.24□□□□□ -1.41
RNF4-211ENST00000509206 HDGFP51858 240 aaKnown RBP6.24□□□□□ -1.41
RNF4-211ENST00000509206 USP21Q9UK80 565 aa6.24□□□□□ -1.41
RNF4-211ENST00000509206 PPP1R15AO75807 674 aaPredicted RBP6.23□□□□□ -1.41
RNF4-211ENST00000509206 C19orf44Q9H6X5 657 aa6.23□□□□□ -1.41
RNF4-211ENST00000509206 INO80Q9ULG1 1556 aaPredicted RBP6.23□□□□□ -1.41
RNF4-211ENST00000509206 TMEM2Q9UHN6 1383 aa6.22□□□□□ -1.41
RNF4-211ENST00000509206 PRDM15P57071 1507 aaPredicted RBP6.22□□□□□ -1.41
RNF4-211ENST00000509206 VASPP50552 380 aaPredicted RBP6.22□□□□□ -1.41
RNF4-211ENST00000509206 CDC42BPAQ5VT25 1732 aa6.22□□□□□ -1.41
RNF4-211ENST00000509206 ARHGAP35Q9NRY4 1499 aa6.22□□□□□ -1.41
RNF4-211ENST00000509206 MTUS2Q5JR59 1369 aa6.21□□□□□ -1.41
RNF4-211ENST00000509206 ZC3H13Q5T200 1668 aaKnown RBP6.21□□□□□ -1.42
RNF4-211ENST00000509206 XIRP1Q702N8 1843 aaKnown RBP6.21□□□□□ -1.42
RNF4-211ENST00000509206 PSDA5PKW4 1024 aaPredicted RBP6.21□□□□□ -1.42
RNF4-211ENST00000509206 DEFB132Q7Z7B7 95 aa6.21□□□□□ -1.42
RNF4-211ENST00000509206 ERVK-7P63135 1459 aa6.21□□□□□ -1.42
RNF4-211ENST00000509206 NCOA2Q15596 1464 aa6.21□□□□□ -1.42
RNF4-211ENST00000509206 CASKIN1Q8WXD9 1431 aa6.2□□□□□ -1.42
RNF4-211ENST00000509206 BRINP3Q76B58 766 aa6.2□□□□□ -1.42
RNF4-211ENST00000509206 SPDYE1Q8NFV5 336 aaPredicted RBP6.2□□□□□ -1.42
RNF4-211ENST00000509206 COL16A1Q07092 1604 aaPredicted RBP6.2□□□□□ -1.42
RNF4-211ENST00000509206 ARHGAP23Q9P227 1491 aa6.2□□□□□ -1.42
RNF4-211ENST00000509206 ABCC3O15438 1527 aa6.2□□□□□ -1.42
RNF4-211ENST00000509206 SLIT1O75093 1534 aa6.2□□□□□ -1.42
RNF4-211ENST00000509206 MAP3K1Q13233 1512 aa6.2□□□□□ -1.42
RNF4-211ENST00000509206 SENP3-EIF4A1A0A087X0R7 540 aa6.19□□□□□ -1.42
RNF4-211ENST00000509206 CHRDL2Q6WN34 429 aa6.19□□□□□ -1.42
RNF4-211ENST00000509206 CLEC11AQ9Y240 323 aa6.19□□□□□ -1.42
RNF4-211ENST00000509206 NKTRP30414 1462 aaKnown RBP6.19□□□□□ -1.42
RNF4-211ENST00000509206 HRCP23327 699 aa6.18□□□□□ -1.42
RNF4-211ENST00000509206 IDI1Q13907 227 aa6.18□□□□□ -1.42
RNF4-211ENST00000509206 CFAP65Q6ZU64 1925 aaKnown RBP6.18□□□□□ -1.42
RNF4-211ENST00000509206 NCOA3Q9Y6Q9 1424 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 SHPRHQ149N8 1683 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 CCDC141Q6ZP82 1450 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 MBD5Q9P267 1494 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 UBR1Q8IWV7 1749 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 PITPNM1O00562 1244 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 CHGAP10645 457 aaKnown RBP6.17□□□□□ -1.42
RNF4-211ENST00000509206 BAG6P46379 1132 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 TBX22Q9Y458 520 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 TIAM1Q13009 1591 aa6.17□□□□□ -1.42
RNF4-211ENST00000509206 BLMP54132 1417 aaPredicted RBP6.16□□□□□ -1.42
RNF4-211ENST00000509206 IFNLR1Q8IU57 520 aaPredicted RBP6.16□□□□□ -1.42
RNF4-211ENST00000509206 GJD4Q96KN9 370 aaPredicted RBP6.16□□□□□ -1.42
RNF4-211ENST00000509206 PPP1R1BQ9UD71 204 aaPredicted RBP6.16□□□□□ -1.42
RNF4-211ENST00000509206 AHDC1Q5TGY3 1603 aaPredicted RBP6.16□□□□□ -1.42
RNF4-211ENST00000509206 KANK1Q14678 1352 aa6.16□□□□□ -1.42
RNF4-211ENST00000509206 SETD5Q9C0A6 1442 aa6.16□□□□□ -1.42
RNF4-211ENST00000509206 NWD1Q149M9 1564 aa6.15□□□□□ -1.42
RNF4-211ENST00000509206 A0A0G2JS52 829 aa6.15□□□□□ -1.42
RNF4-211ENST00000509206 MYT1Q01538 1121 aa6.15□□□□□ -1.42
RNF4-211ENST00000509206 R3HDM1Q15032 1099 aaKnown RBP6.15□□□□□ -1.42
RNF4-211ENST00000509206 FNBP4Q8N3X1 1017 aaPredicted RBP6.15□□□□□ -1.42
RNF4-211ENST00000509206 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.15□□□□□ -1.42
RNF4-211ENST00000509206 DDX17Q92841 729 aaKnown RBP6.15□□□□□ -1.42
RNF4-211ENST00000509206 SLC52A1Q9NWF4 448 aa6.15□□□□□ -1.42
RNF4-211ENST00000509206 AMOTL2Q9Y2J4 779 aa6.15□□□□□ -1.42
RNF4-211ENST00000509206 EFCAB6Q5THR3 1501 aa6.15□□□□□ -1.43
RNF4-211ENST00000509206 LRRIQ1Q96JM4 1722 aa6.14□□□□□ -1.43
RNF4-211ENST00000509206 CCDC9Q9Y3X0 531 aaKnown RBP6.14□□□□□ -1.43
RNF4-211ENST00000509206 PNPLA6Q8IY17 1366 aa6.14□□□□□ -1.43
RNF4-211ENST00000509206 KDM5AP29375 1690 aaKnown RBP6.14□□□□□ -1.43
RNF4-211ENST00000509206 FYCO1Q9BQS8 1478 aa6.13□□□□□ -1.43
RNF4-211ENST00000509206 TET3O43151 1660 aa6.13□□□□□ -1.43
RNF4-211ENST00000509206 LRP5O75197 1615 aa6.12□□□□□ -1.43
RNF4-211ENST00000509206 ATRNO75882 1429 aa6.12□□□□□ -1.43
RNF4-211ENST00000509206 ARHGAP31Q2M1Z3 1444 aa6.12□□□□□ -1.43
RNF4-211ENST00000509206 KRT27Q7Z3Y8 459 aa6.12□□□□□ -1.43
RNF4-211ENST00000509206 SEPT12Q8IYM1 358 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms