RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
TRIM41-204ENST00000508930 USP19O94966 1318 aa18.25■□□□□ 0.51
TRIM41-204ENST00000508930 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-204ENST00000508930 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
TRIM41-204ENST00000508930 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
TRIM41-204ENST00000508930 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
TRIM41-204ENST00000508930 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
TRIM41-204ENST00000508930 HSP90AA1P07900 732 aaKnown RBP18.23■□□□□ 0.51
TRIM41-204ENST00000508930 TBC1D2Q9BYX2 928 aa18.23■□□□□ 0.51
TRIM41-204ENST00000508930 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
TRIM41-204ENST00000508930 KDM5DQ9BY66 1539 aa18.22■□□□□ 0.51
TRIM41-204ENST00000508930 A2MP01023 1474 aa18.22■□□□□ 0.51
TRIM41-204ENST00000508930 FAM135AQ9P2D6 1515 aa18.22■□□□□ 0.51
TRIM41-204ENST00000508930 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRIM41-204ENST00000508930 SHANK2Q9UPX8 1470 aa18.21■□□□□ 0.51
TRIM41-204ENST00000508930 PDZRN3Q9UPQ7 1066 aa18.21■□□□□ 0.51
TRIM41-204ENST00000508930 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
TRIM41-204ENST00000508930 MCM4P33991 863 aa18.21■□□□□ 0.51
TRIM41-204ENST00000508930 MFAP1P55081 439 aaKnown RBP18.21■□□□□ 0.51
TRIM41-204ENST00000508930 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
TRIM41-204ENST00000508930 RWDD1Q9H446 243 aaPredicted RBP18.2■□□□□ 0.5
TRIM41-204ENST00000508930 TNNT2P45379 298 aaPredicted RBP18.2■□□□□ 0.5
TRIM41-204ENST00000508930 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
TRIM41-204ENST00000508930 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
TRIM41-204ENST00000508930 PANK2Q9BZ23 570 aa18.19■□□□□ 0.5
TRIM41-204ENST00000508930 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
TRIM41-204ENST00000508930 PTPRGP23470 1445 aa18.19■□□□□ 0.5
TRIM41-204ENST00000508930 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
TRIM41-204ENST00000508930 TRMT2AQ8IZ69 625 aaKnown RBP18.18■□□□□ 0.5
TRIM41-204ENST00000508930 TBC1D32Q96NH3 1257 aa18.18■□□□□ 0.5
TRIM41-204ENST00000508930 CHMP5Q9NZZ3 219 aa18.18■□□□□ 0.5
TRIM41-204ENST00000508930 TRPM1Q7Z4N2 1603 aa18.18■□□□□ 0.5
TRIM41-204ENST00000508930 TRAK2O60296 914 aa18.18■□□□□ 0.5
TRIM41-204ENST00000508930 MYH16Q9H6N6 1097 aa18.18■□□□□ 0.5
TRIM41-204ENST00000508930 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
TRIM41-204ENST00000508930 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
TRIM41-204ENST00000508930 MAGI2Q86UL8 1455 aa18.17■□□□□ 0.5
TRIM41-204ENST00000508930 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
TRIM41-204ENST00000508930 GRIN2AQ12879 1464 aa18.16■□□□□ 0.5
TRIM41-204ENST00000508930 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
TRIM41-204ENST00000508930 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
TRIM41-204ENST00000508930 ANTXR1Q9H6X2 564 aa18.15■□□□□ 0.5
TRIM41-204ENST00000508930 WWC1Q8IX03 1113 aa18.14■□□□□ 0.49
TRIM41-204ENST00000508930 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
TRIM41-204ENST00000508930 C22orf23Q9BZE7 217 aa18.14■□□□□ 0.49
TRIM41-204ENST00000508930 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
TRIM41-204ENST00000508930 NINLQ9Y2I6 1382 aa18.14■□□□□ 0.49
TRIM41-204ENST00000508930 MRE11P49959 708 aa18.14■□□□□ 0.49
TRIM41-204ENST00000508930 PKNOX2Q96KN3 472 aa18.14■□□□□ 0.49
TRIM41-204ENST00000508930 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
TRIM41-204ENST00000508930 PRDM15P57071 1507 aaPredicted RBP18.13■□□□□ 0.49
TRIM41-204ENST00000508930 PIK3C2GO75747 1445 aa18.12■□□□□ 0.49
TRIM41-204ENST00000508930 CLCN1P35523 988 aa18.12■□□□□ 0.49
TRIM41-204ENST00000508930 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
TRIM41-204ENST00000508930 MORC1Q86VD1 984 aa18.11■□□□□ 0.49
TRIM41-204ENST00000508930 ASXL1Q8IXJ9 1541 aa18.11■□□□□ 0.49
TRIM41-204ENST00000508930 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
TRIM41-204ENST00000508930 WDR7Q9Y4E6 1490 aa18.1■□□□□ 0.49
TRIM41-204ENST00000508930 RARSP54136 660 aaKnown RBP18.1■□□□□ 0.49
TRIM41-204ENST00000508930 DDX11L8A8MPP1 907 aa18.1■□□□□ 0.49
TRIM41-204ENST00000508930 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
TRIM41-204ENST00000508930 NUP160Q12769 1436 aa18.1■□□□□ 0.49
TRIM41-204ENST00000508930 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
TRIM41-204ENST00000508930 AAMPQ13685 434 aa18.09■□□□□ 0.49
TRIM41-204ENST00000508930 RLBP1P12271 317 aa18.09■□□□□ 0.49
TRIM41-204ENST00000508930 ATP10BO94823 1461 aa18.08■□□□□ 0.49
TRIM41-204ENST00000508930 GRPEL1Q9HAV7 217 aa18.08■□□□□ 0.49
TRIM41-204ENST00000508930 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
TRIM41-204ENST00000508930 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
TRIM41-204ENST00000508930 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
TRIM41-204ENST00000508930 EIF2AK4Q9P2K8 1649 aaKnown RBP18.07■□□□□ 0.48
TRIM41-204ENST00000508930 CDC42BPAQ5VT25 1732 aa18.07■□□□□ 0.48
TRIM41-204ENST00000508930 FSD2A1L4K1 749 aa18.07■□□□□ 0.48
TRIM41-204ENST00000508930 ESPNB1AK53 854 aa18.06■□□□□ 0.48
TRIM41-204ENST00000508930 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
TRIM41-204ENST00000508930 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
TRIM41-204ENST00000508930 ANP32BQ92688 251 aaKnown RBP18.05■□□□□ 0.48
TRIM41-204ENST00000508930 RRP9O43818 475 aaKnown RBP18.05■□□□□ 0.48
TRIM41-204ENST00000508930 ZKSCAN2Q63HK3 967 aa18.04■□□□□ 0.48
TRIM41-204ENST00000508930 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
TRIM41-204ENST00000508930 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
TRIM41-204ENST00000508930 GBP4Q96PP9 640 aa18.03■□□□□ 0.48
TRIM41-204ENST00000508930 SLC24A1O60721 1099 aa18.03■□□□□ 0.48
TRIM41-204ENST00000508930 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
TRIM41-204ENST00000508930 SMC4Q9NTJ3 1288 aa18.02■□□□□ 0.48
TRIM41-204ENST00000508930 FOXD4L1Q9NU39 408 aa18.02■□□□□ 0.48
TRIM41-204ENST00000508930 SCAF11Q99590 1463 aaKnown RBP18.02■□□□□ 0.47
TRIM41-204ENST00000508930 MVPQ14764 893 aaKnown RBP18.01■□□□□ 0.47
TRIM41-204ENST00000508930 CLASP1Q7Z460 1538 aa18.01■□□□□ 0.47
TRIM41-204ENST00000508930 ZMYND15Q9H091 742 aa18.01■□□□□ 0.47
TRIM41-204ENST00000508930 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
TRIM41-204ENST00000508930 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
TRIM41-204ENST00000508930 CFAP70Q5T0N1 1121 aa18■□□□□ 0.47
TRIM41-204ENST00000508930 SYNJ2O15056 1496 aa18■□□□□ 0.47
TRIM41-204ENST00000508930 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
TRIM41-204ENST00000508930 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
TRIM41-204ENST00000508930 ARHGEF5Q12774 1597 aa17.99■□□□□ 0.47
TRIM41-204ENST00000508930 CARD14Q9BXL6 1004 aa17.99■□□□□ 0.47
TRIM41-204ENST00000508930 ARHGAP5Q13017 1502 aa17.99■□□□□ 0.47
TRIM41-204ENST00000508930 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms