RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SHANK2Q9UPX8 1470 aa5.15□□□□□ -1.59
NEDD4-209ENST00000508871 FGD6Q6ZV73 1430 aa5.15□□□□□ -1.59
NEDD4-209ENST00000508871 TSC1Q92574 1164 aa5.15□□□□□ -1.59
NEDD4-209ENST00000508871 TSR1Q2NL82 804 aaKnown RBP5.14□□□□□ -1.59
NEDD4-209ENST00000508871 ZFP91Q96JP5 570 aaPredicted RBP5.14□□□□□ -1.59
NEDD4-209ENST00000508871 ATF5Q9Y2D1 282 aaPredicted RBP5.14□□□□□ -1.59
NEDD4-209ENST00000508871 CERS3Q8IU89 383 aa5.14□□□□□ -1.59
NEDD4-209ENST00000508871 TCERG1O14776 1098 aaKnown RBP5.14□□□□□ -1.59
NEDD4-209ENST00000508871 CDCA8Q53HL2 280 aa5.14□□□□□ -1.59
NEDD4-209ENST00000508871 PROSER2Q86WR7 435 aaPredicted RBP5.14□□□□□ -1.59
NEDD4-209ENST00000508871 STK11IPQ8N1F8 1099 aa5.14□□□□□ -1.59
NEDD4-209ENST00000508871 B4GALNT3Q6L9W6 998 aa5.13□□□□□ -1.59
NEDD4-209ENST00000508871 PPP4R4Q6NUP7 873 aa5.13□□□□□ -1.59
NEDD4-209ENST00000508871 KDM5BQ9UGL1 1544 aa5.13□□□□□ -1.59
NEDD4-209ENST00000508871 GPATCH11Q8N954 259 aa5.13□□□□□ -1.59
NEDD4-209ENST00000508871 TROQ12816 1431 aaPredicted RBP5.13□□□□□ -1.59
NEDD4-209ENST00000508871 RBM26Q5T8P6 1007 aaKnown RBP5.13□□□□□ -1.59
NEDD4-209ENST00000508871 RBM19Q9Y4C8 960 aaKnown RBP5.13□□□□□ -1.59
NEDD4-209ENST00000508871 CDK13Q14004 1512 aaKnown RBP5.13□□□□□ -1.59
NEDD4-209ENST00000508871 CHMP7Q8WUX9 453 aaPredicted RBP5.12□□□□□ -1.59
NEDD4-209ENST00000508871 CDC42BPBQ9Y5S2 1711 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 ADGRL2O95490 1459 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 SH3BP5O60239 455 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 TRAK2O60296 914 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 SETQ01105 290 aaPredicted RBP5.12□□□□□ -1.59
NEDD4-209ENST00000508871 IVNS1ABPQ9Y6Y0 642 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 PLXNC1O60486 1568 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 ABCC10Q5T3U5 1492 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 PDE4DQ08499 809 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 ROCK1Q13464 1354 aa5.12□□□□□ -1.59
NEDD4-209ENST00000508871 MTUS2Q5JR59 1369 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 hCG_2014768A0A024R1R8 64 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 AAMPQ13685 434 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 PHLDB1Q86UU1 1377 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 TMC1Q8TDI8 760 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 PRG4Q92954 1404 aaPredicted RBP5.11□□□□□ -1.59
NEDD4-209ENST00000508871 KDM5DQ9BY66 1539 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 TRIM63Q969Q1 353 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 POLA2Q14181 598 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 ABCA9Q8IUA7 1624 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 PLEKHH2Q8IVE3 1493 aa5.11□□□□□ -1.59
NEDD4-209ENST00000508871 WWC3Q9ULE0 1092 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 UACAQ9BZF9 1416 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 HFM1A2PYH4 1435 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 POLR3EQ9NVU0 708 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 SETD5Q9C0A6 1442 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 C1orf115Q9H7X2 142 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 ENOX2Q16206 610 aaKnown RBP5.1□□□□□ -1.59
NEDD4-209ENST00000508871 TRAIPQ9BWF2 469 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 BCL2L13Q9BXK5 485 aa5.1□□□□□ -1.59
NEDD4-209ENST00000508871 IGBP1P78318 339 aa5.09□□□□□ -1.59
NEDD4-209ENST00000508871 CSPP1Q1MSJ5 1256 aa5.09□□□□□ -1.59
NEDD4-209ENST00000508871 KANK4Q5T7N3 995 aaPredicted RBP5.09□□□□□ -1.59
NEDD4-209ENST00000508871 DRC1Q96MC2 740 aa5.09□□□□□ -1.59
NEDD4-209ENST00000508871 LARP6Q9BRS8 491 aaKnown RBP5.09□□□□□ -1.59
NEDD4-209ENST00000508871 RBM27Q9P2N5 1060 aaKnown RBP5.09□□□□□ -1.59
NEDD4-209ENST00000508871 ZBTB12Q9Y330 459 aaPredicted RBP5.09□□□□□ -1.59
NEDD4-209ENST00000508871 BCORL1Q5H9F3 1711 aa5.09□□□□□ -1.59
NEDD4-209ENST00000508871 CAMSAP2Q08AD1 1489 aa5.09□□□□□ -1.59
NEDD4-209ENST00000508871 L1TD1Q5T7N2 865 aaKnown RBP5.09□□□□□ -1.59
NEDD4-209ENST00000508871 TMA7Q9Y2S6 64 aaKnown RBP5.09□□□□□ -1.59
NEDD4-209ENST00000508871 HSP90AA1P07900 732 aaKnown RBP5.09□□□□□ -1.59
NEDD4-209ENST00000508871 CHMP3Q9Y3E7 222 aa5.09□□□□□ -1.59
NEDD4-209ENST00000508871 EIF2AK4Q9P2K8 1649 aaKnown RBP5.09□□□□□ -1.6
NEDD4-209ENST00000508871 GTPBP6O43824 516 aaPredicted RBP5.09□□□□□ -1.6
NEDD4-209ENST00000508871 TNNT2P45379 298 aaPredicted RBP5.09□□□□□ -1.6
NEDD4-209ENST00000508871 BRD3Q15059 726 aa5.09□□□□□ -1.6
NEDD4-209ENST00000508871 HSP90AB4PQ58FF6 505 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 WDR7Q9Y4E6 1490 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 UNC13BO14795 1591 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 ATP10BO94823 1461 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 ARHGEF1Q92888 912 aaKnown RBP5.08□□□□□ -1.6
NEDD4-209ENST00000508871 NAP1L4Q99733 375 aaKnown RBP5.08□□□□□ -1.6
NEDD4-209ENST00000508871 SAMD9LQ8IVG5 1584 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 GRXCR2A6NFK2 248 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 PMFBP1Q8TBY8 1022 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 PRDM10Q9NQV6 1147 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 CCAR1Q8IX12 1150 aaKnown RBP5.08□□□□□ -1.6
NEDD4-209ENST00000508871 FAM117AQ9C073 453 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 PLB1Q6P1J6 1458 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 SAFB2Q14151 953 aaKnown RBP eCLIP5.08□□□□□ -1.6
NEDD4-209ENST00000508871 CLEC11AQ9Y240 323 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 DAPK1P53355 1430 aa5.08□□□□□ -1.6
NEDD4-209ENST00000508871 GTF2F1P35269 517 aaKnown RBP eCLIP5.07□□□□□ -1.6
NEDD4-209ENST00000508871 HSP90AB2PQ58FF8 381 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 TTC37Q6PGP7 1564 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 JPH4Q96JJ6 628 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 PTPRGP23470 1445 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.07□□□□□ -1.6
NEDD4-209ENST00000508871 PEX14O75381 377 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.07□□□□□ -1.6
NEDD4-209ENST00000508871 TRIM34Q9BYJ4 488 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 DMRT2Q9Y5R5 561 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 MARCH6O60337 910 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 LMOD3Q0VAK6 560 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 GIPC2Q8TF65 315 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 TANGO6Q9C0B7 1094 aa5.07□□□□□ -1.6
NEDD4-209ENST00000508871 GPATCH8Q9UKJ3 1502 aaKnown RBP5.07□□□□□ -1.6
NEDD4-209ENST00000508871 MAPKBP1O60336 1514 aa5.06□□□□□ -1.6
NEDD4-209ENST00000508871 G3V3G9 751 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms