RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
TOPBP1-206ENST00000508524 SLF2Q8IX21 1173 aa13.27□□□□□ -0.29
TOPBP1-206ENST00000508524 IRF6O14896 467 aa13.26□□□□□ -0.29
TOPBP1-206ENST00000508524 MINK1Q8N4C8 1332 aaPredicted RBP13.25□□□□□ -0.29
TOPBP1-206ENST00000508524 ZMYND10O75800 440 aa13.25□□□□□ -0.29
TOPBP1-206ENST00000508524 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
TOPBP1-206ENST00000508524 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
TOPBP1-206ENST00000508524 PLA2G2EQ9NZK7 142 aa13.23□□□□□ -0.29
TOPBP1-206ENST00000508524 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
TOPBP1-206ENST00000508524 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
TOPBP1-206ENST00000508524 APLP1P51693 650 aa13.2□□□□□ -0.3
TOPBP1-206ENST00000508524 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
TOPBP1-206ENST00000508524 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
TOPBP1-206ENST00000508524 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
TOPBP1-206ENST00000508524 SLC10A3P09131 477 aa13.17□□□□□ -0.3
TOPBP1-206ENST00000508524 KRI1Q8N9T8 703 aaKnown RBP13.14□□□□□ -0.31
TOPBP1-206ENST00000508524 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
TOPBP1-206ENST00000508524 CFHP08603 1231 aa13.12□□□□□ -0.31
TOPBP1-206ENST00000508524 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
TOPBP1-206ENST00000508524 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
TOPBP1-206ENST00000508524 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
TOPBP1-206ENST00000508524 MTRQ99707 1265 aa13.1□□□□□ -0.31
TOPBP1-206ENST00000508524 PRR14Q9BWN1 585 aa13.1□□□□□ -0.31
TOPBP1-206ENST00000508524 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
TOPBP1-206ENST00000508524 KCNC4Q03721 635 aa13.07□□□□□ -0.32
TOPBP1-206ENST00000508524 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
TOPBP1-206ENST00000508524 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
TOPBP1-206ENST00000508524 TMUB1Q9BVT8 246 aa13.07□□□□□ -0.32
TOPBP1-206ENST00000508524 RSPH4AQ5TD94 716 aa13.06□□□□□ -0.32
TOPBP1-206ENST00000508524 RDH13Q8NBN7 331 aa13.06□□□□□ -0.32
TOPBP1-206ENST00000508524 IL21Q9HBE4 155 aa13.05□□□□□ -0.32
TOPBP1-206ENST00000508524 PCDHB3Q9Y5E6 796 aa13.05□□□□□ -0.32
TOPBP1-206ENST00000508524 AMHR2Q16671 573 aa13.04□□□□□ -0.32
TOPBP1-206ENST00000508524 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
TOPBP1-206ENST00000508524 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
TOPBP1-206ENST00000508524 CLCN1P35523 988 aa13.03□□□□□ -0.32
TOPBP1-206ENST00000508524 COPS2P61201 443 aa13.03□□□□□ -0.32
TOPBP1-206ENST00000508524 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
TOPBP1-206ENST00000508524 CD46P15529 392 aa13.02□□□□□ -0.33
TOPBP1-206ENST00000508524 BLOC1S3Q6QNY0 202 aa13.02□□□□□ -0.33
TOPBP1-206ENST00000508524 A0A0G2JS52 829 aa13.01□□□□□ -0.33
TOPBP1-206ENST00000508524 GCGRP47871 477 aa13.01□□□□□ -0.33
TOPBP1-206ENST00000508524 AK7Q96M32 723 aa13.01□□□□□ -0.33
TOPBP1-206ENST00000508524 TRIM66O15016 1216 aa13□□□□□ -0.33
TOPBP1-206ENST00000508524 SLC24A3Q9HC58 644 aa13□□□□□ -0.33
TOPBP1-206ENST00000508524 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
TOPBP1-206ENST00000508524 ZPR1O75312 459 aa12.97□□□□□ -0.33
TOPBP1-206ENST00000508524 FUT2Q10981 343 aa12.97□□□□□ -0.33
TOPBP1-206ENST00000508524 TTLL12Q14166 644 aaPredicted RBP12.96□□□□□ -0.33
TOPBP1-206ENST00000508524 PUS10Q3MIT2 529 aaKnown RBP12.96□□□□□ -0.33
TOPBP1-206ENST00000508524 PARP9Q8IXQ6 854 aa12.95□□□□□ -0.34
TOPBP1-206ENST00000508524 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
TOPBP1-206ENST00000508524 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
TOPBP1-206ENST00000508524 TLL1O43897 1013 aa12.92□□□□□ -0.34
TOPBP1-206ENST00000508524 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
TOPBP1-206ENST00000508524 MORN1Q5T089 497 aa12.92□□□□□ -0.34
TOPBP1-206ENST00000508524 NR1I2O75469 434 aa12.91□□□□□ -0.34
TOPBP1-206ENST00000508524 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
TOPBP1-206ENST00000508524 SCUBE3Q8IX30 993 aa12.9□□□□□ -0.34
TOPBP1-206ENST00000508524 KDM4AO75164 1064 aa12.89□□□□□ -0.35
TOPBP1-206ENST00000508524 PDE4DQ08499 809 aa12.89□□□□□ -0.35
TOPBP1-206ENST00000508524 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
TOPBP1-206ENST00000508524 SLC27A5Q9Y2P5 690 aa12.86□□□□□ -0.35
TOPBP1-206ENST00000508524 MS4A1P11836 297 aa12.85□□□□□ -0.35
TOPBP1-206ENST00000508524 USP46P62068 366 aa12.84□□□□□ -0.35
TOPBP1-206ENST00000508524 THAP11Q96EK4 314 aa12.84□□□□□ -0.35
TOPBP1-206ENST00000508524 HOXA2O43364 376 aa12.83□□□□□ -0.36
TOPBP1-206ENST00000508524 ADH1BP00325 375 aa12.83□□□□□ -0.36
TOPBP1-206ENST00000508524 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
TOPBP1-206ENST00000508524 HLA-CQ95604 372 aa12.83□□□□□ -0.36
TOPBP1-206ENST00000508524 RGS20O76081 388 aa12.82□□□□□ -0.36
TOPBP1-206ENST00000508524 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.82□□□□□ -0.36
TOPBP1-206ENST00000508524 BEGAINQ9BUH8 593 aa12.81□□□□□ -0.36
TOPBP1-206ENST00000508524 SPSB2Q99619 263 aa12.8□□□□□ -0.36
TOPBP1-206ENST00000508524 SALL2Q9Y467 1007 aaPredicted RBP12.8□□□□□ -0.36
TOPBP1-206ENST00000508524 RNF19BQ6ZMZ0 732 aa12.79□□□□□ -0.36
TOPBP1-206ENST00000508524 NUTM1Q86Y26 1132 aa12.79□□□□□ -0.36
TOPBP1-206ENST00000508524 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
TOPBP1-206ENST00000508524 S1PR4O95977 384 aa12.78□□□□□ -0.36
TOPBP1-206ENST00000508524 GUCA2AQ02747 115 aa12.78□□□□□ -0.36
TOPBP1-206ENST00000508524 BRICD5Q6PL45 260 aa12.78□□□□□ -0.36
TOPBP1-206ENST00000508524 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.37
TOPBP1-206ENST00000508524 GGCXP38435 758 aa12.77□□□□□ -0.37
TOPBP1-206ENST00000508524 RNF223E7ERA6 249 aa12.76□□□□□ -0.37
TOPBP1-206ENST00000508524 SLC6A16Q9GZN6 736 aa12.76□□□□□ -0.37
TOPBP1-206ENST00000508524 Q3C1V9 767 aa12.74□□□□□ -0.37
TOPBP1-206ENST00000508524 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
TOPBP1-206ENST00000508524 FAM160A2Q8N612 972 aaPredicted RBP12.74□□□□□ -0.37
TOPBP1-206ENST00000508524 MOXD2PA6NHM9 499 aa12.73□□□□□ -0.37
TOPBP1-206ENST00000508524 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
TOPBP1-206ENST00000508524 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
TOPBP1-206ENST00000508524 GPBP1L1Q9HC44 474 aaPredicted RBP12.72□□□□□ -0.37
TOPBP1-206ENST00000508524 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
TOPBP1-206ENST00000508524 FDX1P10109 184 aa12.71□□□□□ -0.37
TOPBP1-206ENST00000508524 NDUFV2P19404 249 aa12.71□□□□□ -0.37
TOPBP1-206ENST00000508524 PRDM9Q9NQV7 894 aa12.71□□□□□ -0.37
TOPBP1-206ENST00000508524 MSS51Q4VC12 460 aa12.7□□□□□ -0.38
TOPBP1-206ENST00000508524 ANKLE1Q8NAG6 615 aa12.7□□□□□ -0.38
TOPBP1-206ENST00000508524 KDM4CQ9H3R0 1056 aa12.69□□□□□ -0.38
TOPBP1-206ENST00000508524 DIXDC1Q155Q3 683 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms