RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 ABCA10Q8WWZ4 1543 aa9.95□□□□□ -0.82
PDE6A-202ENST00000508173 AKAP17AQ02040 695 aaKnown RBP9.95□□□□□ -0.82
PDE6A-202ENST00000508173 ARHGAP5Q13017 1502 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 KIAA0586Q9BVV6 1533 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 TOP2BQ02880 1626 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 APBB1O00213 710 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 SMC4Q9NTJ3 1288 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 NUTM2FA1L443 756 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 PLIN1O60240 522 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 PDE3BQ13370 1112 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 LRRFIP1Q32MZ4 808 aaKnown RBP9.94□□□□□ -0.82
PDE6A-202ENST00000508173 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
PDE6A-202ENST00000508173 URB2Q14146 1524 aaKnown RBP9.94□□□□□ -0.82
PDE6A-202ENST00000508173 MFAP1P55081 439 aaKnown RBP9.93□□□□□ -0.82
PDE6A-202ENST00000508173 HMMRO75330 724 aa9.93□□□□□ -0.82
PDE6A-202ENST00000508173 GRIN2AQ12879 1464 aa9.93□□□□□ -0.82
PDE6A-202ENST00000508173 DHX16O60231 1041 aaKnown RBP9.93□□□□□ -0.82
PDE6A-202ENST00000508173 EXOC6Q8TAG9 804 aa9.93□□□□□ -0.82
PDE6A-202ENST00000508173 PLEKHH2Q8IVE3 1493 aa9.93□□□□□ -0.82
PDE6A-202ENST00000508173 U2AF1L5P0DN76 240 aaPredicted RBP9.93□□□□□ -0.82
PDE6A-202ENST00000508173 U2AF1Q01081 240 aaKnown RBP eCLIP9.93□□□□□ -0.82
PDE6A-202ENST00000508173 PKNOX2Q96KN3 472 aa9.93□□□□□ -0.82
PDE6A-202ENST00000508173 NBPF8Q3BBV2 869 aa9.92□□□□□ -0.82
PDE6A-202ENST00000508173 NBPF14Q5TI25 921 aa9.92□□□□□ -0.82
PDE6A-202ENST00000508173 NUP155O75694 1391 aa9.92□□□□□ -0.82
PDE6A-202ENST00000508173 CUL7Q14999 1698 aa9.92□□□□□ -0.82
PDE6A-202ENST00000508173 ERICH3Q5RHP9 1530 aa9.91□□□□□ -0.82
PDE6A-202ENST00000508173 SYNE3Q6ZMZ3 975 aa9.91□□□□□ -0.82
PDE6A-202ENST00000508173 KIF3AQ9Y496 699 aa9.91□□□□□ -0.82
PDE6A-202ENST00000508173 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
PDE6A-202ENST00000508173 SAMD1Q6SPF0 538 aaPredicted RBP9.91□□□□□ -0.82
PDE6A-202ENST00000508173 PAF1Q8N7H5 531 aa9.91□□□□□ -0.82
PDE6A-202ENST00000508173 CHMP4CQ96CF2 233 aa9.91□□□□□ -0.82
PDE6A-202ENST00000508173 NEXNQ0ZGT2 675 aa9.9□□□□□ -0.82
PDE6A-202ENST00000508173 TEFQ10587 303 aa9.9□□□□□ -0.82
PDE6A-202ENST00000508173 CD109Q6YHK3 1445 aa9.9□□□□□ -0.82
PDE6A-202ENST00000508173 DHX57Q6P158 1386 aaKnown RBP9.9□□□□□ -0.82
PDE6A-202ENST00000508173 USP35Q9P2H5 1018 aa9.9□□□□□ -0.82
PDE6A-202ENST00000508173 C16orf71Q8IYS4 520 aaPredicted RBP9.89□□□□□ -0.83
PDE6A-202ENST00000508173 GPRASP1Q5JY77 1395 aa9.89□□□□□ -0.83
PDE6A-202ENST00000508173 TPM2P07951 284 aa9.89□□□□□ -0.83
PDE6A-202ENST00000508173 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDE6A-202ENST00000508173 CREBRFQ8IUR6 639 aa9.89□□□□□ -0.83
PDE6A-202ENST00000508173 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
PDE6A-202ENST00000508173 PAXIP1Q6ZW49 1069 aaPredicted RBP9.88□□□□□ -0.83
PDE6A-202ENST00000508173 LMTK3Q96Q04 1460 aa9.88□□□□□ -0.83
PDE6A-202ENST00000508173 DISP3Q9P2K9 1392 aa9.88□□□□□ -0.83
PDE6A-202ENST00000508173 GBP4Q96PP9 640 aa9.88□□□□□ -0.83
PDE6A-202ENST00000508173 EFCAB5A4FU69 1503 aa9.88□□□□□ -0.83
PDE6A-202ENST00000508173 FOXD4L5Q5VV16 416 aaPredicted RBP9.87□□□□□ -0.83
PDE6A-202ENST00000508173 SLC4A10Q6U841 1118 aa9.87□□□□□ -0.83
PDE6A-202ENST00000508173 FOXD4L4Q8WXT5 416 aaPredicted RBP9.87□□□□□ -0.83
PDE6A-202ENST00000508173 IQGAP2Q13576 1575 aa9.87□□□□□ -0.83
PDE6A-202ENST00000508173 PKD2Q13563 968 aa9.87□□□□□ -0.83
PDE6A-202ENST00000508173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDE6A-202ENST00000508173 COG3Q96JB2 828 aa9.87□□□□□ -0.83
PDE6A-202ENST00000508173 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
PDE6A-202ENST00000508173 TMEM132AQ24JP5 1023 aa9.86□□□□□ -0.83
PDE6A-202ENST00000508173 CCDC146Q8IYE0 955 aa9.86□□□□□ -0.83
PDE6A-202ENST00000508173 CCDC47Q96A33 483 aaKnown RBP9.86□□□□□ -0.83
PDE6A-202ENST00000508173 CRBNQ96SW2 442 aa9.86□□□□□ -0.83
PDE6A-202ENST00000508173 FBXO3Q9UK99 471 aa9.86□□□□□ -0.83
PDE6A-202ENST00000508173 WDR62O43379 1518 aa9.86□□□□□ -0.83
PDE6A-202ENST00000508173 ZNF608Q9ULD9 1512 aaPredicted RBP9.86□□□□□ -0.83
PDE6A-202ENST00000508173 RAPGEF4Q8WZA2 1011 aa9.85□□□□□ -0.83
PDE6A-202ENST00000508173 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
PDE6A-202ENST00000508173 TPM3P06753 285 aa9.85□□□□□ -0.83
PDE6A-202ENST00000508173 NFKBIBQ15653 356 aa9.85□□□□□ -0.83
PDE6A-202ENST00000508173 TPD52L1Q16890 204 aaPredicted RBP9.85□□□□□ -0.83
PDE6A-202ENST00000508173 HECW1Q76N89 1606 aa9.85□□□□□ -0.83
PDE6A-202ENST00000508173 ITPRIPQ8IWB1 547 aa9.85□□□□□ -0.83
PDE6A-202ENST00000508173 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
PDE6A-202ENST00000508173 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
PDE6A-202ENST00000508173 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
PDE6A-202ENST00000508173 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
PDE6A-202ENST00000508173 DDX58O95786 925 aaKnown RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 RRP1P56182 461 aaKnown RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 KTN1Q86UP2 1357 aaKnown RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 PES1O00541 588 aaKnown RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 IKQ13123 557 aaPredicted RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 TSR1Q2NL82 804 aaKnown RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 CPLX2Q6PUV4 134 aaKnown RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 NOL8Q76FK4 1167 aaKnown RBP9.83□□□□□ -0.84
PDE6A-202ENST00000508173 MYOM3Q5VTT5 1437 aa9.83□□□□□ -0.84
PDE6A-202ENST00000508173 RAPGEF3O95398 923 aa9.82□□□□□ -0.84
PDE6A-202ENST00000508173 SF3A1Q15459 793 aaKnown RBP9.82□□□□□ -0.84
PDE6A-202ENST00000508173 ROCK2O75116 1388 aaKnown RBP9.82□□□□□ -0.84
PDE6A-202ENST00000508173 TNNT3P45378 269 aaPredicted RBP9.82□□□□□ -0.84
PDE6A-202ENST00000508173 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
PDE6A-202ENST00000508173 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
PDE6A-202ENST00000508173 CLUAP1Q96AJ1 413 aa9.81□□□□□ -0.84
PDE6A-202ENST00000508173 ERICH2A1L162 156 aa9.81□□□□□ -0.84
PDE6A-202ENST00000508173 APPP05067 770 aa9.8□□□□□ -0.84
PDE6A-202ENST00000508173 TRIM29Q14134 588 aa9.8□□□□□ -0.84
PDE6A-202ENST00000508173 MSH6P52701 1360 aa9.8□□□□□ -0.84
PDE6A-202ENST00000508173 LRPPRCP42704 1394 aaKnown RBP9.8□□□□□ -0.84
PDE6A-202ENST00000508173 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
PDE6A-202ENST00000508173 BCL11BQ9C0K0 894 aaPredicted RBP9.8□□□□□ -0.84
PDE6A-202ENST00000508173 CASKIN1Q8WXD9 1431 aa9.8□□□□□ -0.84
PDE6A-202ENST00000508173 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms