RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
CAST-220ENST00000508117 EFCAB6Q5THR3 1501 aa14.59□□□□□ -0.07
CAST-220ENST00000508117 NWD1Q149M9 1564 aa14.59□□□□□ -0.07
CAST-220ENST00000508117 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.07
CAST-220ENST00000508117 JCADQ9P266 1359 aa14.58□□□□□ -0.08
CAST-220ENST00000508117 PROSER2Q86WR7 435 aaPredicted RBP14.57□□□□□ -0.08
CAST-220ENST00000508117 SETD1AO15047 1707 aaKnown RBP14.57□□□□□ -0.08
CAST-220ENST00000508117 PHLPP1O60346 1717 aa14.55□□□□□ -0.08
CAST-220ENST00000508117 ABCB7O75027 752 aa14.55□□□□□ -0.08
CAST-220ENST00000508117 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
CAST-220ENST00000508117 MSH6P52701 1360 aa14.55□□□□□ -0.08
CAST-220ENST00000508117 KIF15Q9NS87 1388 aa14.55□□□□□ -0.08
CAST-220ENST00000508117 LMTK2Q8IWU2 1503 aa14.55□□□□□ -0.08
CAST-220ENST00000508117 IDI1Q13907 227 aa14.54□□□□□ -0.08
CAST-220ENST00000508117 SLAIN2Q9P270 581 aa14.54□□□□□ -0.08
CAST-220ENST00000508117 FGD6Q6ZV73 1430 aa14.53□□□□□ -0.08
CAST-220ENST00000508117 KANK1Q14678 1352 aa14.53□□□□□ -0.08
CAST-220ENST00000508117 CROCC2H7BZ55 1655 aa14.52□□□□□ -0.08
CAST-220ENST00000508117 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.08
CAST-220ENST00000508117 NCOA3Q9Y6Q9 1424 aa14.52□□□□□ -0.08
CAST-220ENST00000508117 SLC26A8Q96RN1 970 aa14.52□□□□□ -0.09
CAST-220ENST00000508117 NOS1P29475 1434 aa14.51□□□□□ -0.09
CAST-220ENST00000508117 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
CAST-220ENST00000508117 ADGRB3O60242 1522 aa14.51□□□□□ -0.09
CAST-220ENST00000508117 CHD2O14647 1828 aaKnown RBP14.5□□□□□ -0.09
CAST-220ENST00000508117 ZNF772Q68DY9 489 aaPredicted RBP14.5□□□□□ -0.09
CAST-220ENST00000508117 UPF1Q92900 1129 aaKnown RBP eCLIP14.5□□□□□ -0.09
CAST-220ENST00000508117 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
CAST-220ENST00000508117 ABCC5O15440 1437 aa14.49□□□□□ -0.09
CAST-220ENST00000508117 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
CAST-220ENST00000508117 RBM33Q96EV2 1170 aaKnown RBP14.49□□□□□ -0.09
CAST-220ENST00000508117 RRP7BPQ9NSQ0 103 aa14.47□□□□□ -0.09
CAST-220ENST00000508117 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
CAST-220ENST00000508117 LRP6O75581 1613 aa14.47□□□□□ -0.09
CAST-220ENST00000508117 PLEKHG1Q9ULL1 1385 aa14.47□□□□□ -0.09
CAST-220ENST00000508117 SHPRHQ149N8 1683 aa14.46□□□□□ -0.09
CAST-220ENST00000508117 CDK12Q9NYV4 1490 aaPredicted RBP14.46□□□□□ -0.09
CAST-220ENST00000508117 AHDC1Q5TGY3 1603 aaPredicted RBP14.46□□□□□ -0.09
CAST-220ENST00000508117 ZFYVE9O95405 1425 aa14.46□□□□□ -0.09
CAST-220ENST00000508117 KANK4Q5T7N3 995 aaPredicted RBP14.45□□□□□ -0.1
CAST-220ENST00000508117 RPRD2Q5VT52 1461 aaKnown RBP14.44□□□□□ -0.1
CAST-220ENST00000508117 DAPK1P53355 1430 aa14.44□□□□□ -0.1
CAST-220ENST00000508117 HDGFP51858 240 aaKnown RBP14.44□□□□□ -0.1
CAST-220ENST00000508117 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
CAST-220ENST00000508117 PTPN23Q9H3S7 1636 aa14.44□□□□□ -0.1
CAST-220ENST00000508117 MEX3CQ5U5Q3 659 aaKnown RBP14.42□□□□□ -0.1
CAST-220ENST00000508117 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
CAST-220ENST00000508117 ANKRD30AQ9BXX3 1397 aa14.42□□□□□ -0.1
CAST-220ENST00000508117 RXRBP28702 533 aa14.41□□□□□ -0.1
CAST-220ENST00000508117 BCANQ96GW7 911 aa14.41□□□□□ -0.1
CAST-220ENST00000508117 PIK3R4Q99570 1358 aa14.41□□□□□ -0.1
CAST-220ENST00000508117 MYO5BQ9ULV0 1848 aa14.41□□□□□ -0.1
CAST-220ENST00000508117 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.41□□□□□ -0.1
CAST-220ENST00000508117 TRIM52Q96A61 297 aa14.4□□□□□ -0.1
CAST-220ENST00000508117 C19orf44Q9H6X5 657 aa14.4□□□□□ -0.1
CAST-220ENST00000508117 TMEM131LA2VDJ0 1609 aa14.4□□□□□ -0.1
CAST-220ENST00000508117 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
CAST-220ENST00000508117 DIP2AQ14689 1571 aa14.39□□□□□ -0.11
CAST-220ENST00000508117 GCC2Q8IWJ2 1684 aa14.38□□□□□ -0.11
CAST-220ENST00000508117 PPP1R15AO75807 674 aaPredicted RBP14.37□□□□□ -0.11
CAST-220ENST00000508117 ATF3P18847 181 aa14.37□□□□□ -0.11
CAST-220ENST00000508117 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.37□□□□□ -0.11
CAST-220ENST00000508117 ADAMTS13Q76LX8 1427 aa14.37□□□□□ -0.11
CAST-220ENST00000508117 ADGRL2O95490 1459 aa14.37□□□□□ -0.11
CAST-220ENST00000508117 DCCP43146 1447 aa14.36□□□□□ -0.11
CAST-220ENST00000508117 C14orf37Q86TY3 774 aa14.36□□□□□ -0.11
CAST-220ENST00000508117 SETD5Q9C0A6 1442 aa14.35□□□□□ -0.11
CAST-220ENST00000508117 BRINP3Q76B58 766 aa14.34□□□□□ -0.11
CAST-220ENST00000508117 CHIC2Q9UKJ5 165 aa14.33□□□□□ -0.12
CAST-220ENST00000508117 AFF2P51816 1311 aa14.33□□□□□ -0.12
CAST-220ENST00000508117 TRPM2O94759 1503 aa14.32□□□□□ -0.12
CAST-220ENST00000508117 ANKRD50Q9ULJ7 1429 aa14.32□□□□□ -0.12
CAST-220ENST00000508117 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
CAST-220ENST00000508117 NHSL1Q5SYE7 1610 aa14.31□□□□□ -0.12
CAST-220ENST00000508117 RBM6P78332 1123 aaKnown RBP14.3□□□□□ -0.12
CAST-220ENST00000508117 LRRC59Q96AG4 307 aaKnown RBP14.3□□□□□ -0.12
CAST-220ENST00000508117 NUTM2BA6NNL0 878 aaPredicted RBP14.29□□□□□ -0.12
CAST-220ENST00000508117 NUTM2EB1AL46 878 aaPredicted RBP14.29□□□□□ -0.12
CAST-220ENST00000508117 NUTM2AQ8IVF1 878 aaPredicted RBP14.29□□□□□ -0.12
CAST-220ENST00000508117 AMOTL2Q9Y2J4 779 aa14.29□□□□□ -0.12
CAST-220ENST00000508117 RGS12O14924 1447 aa14.29□□□□□ -0.12
CAST-220ENST00000508117 SRCAPQ6ZRS2 3230 aa14.29□□□□□ -0.12
CAST-220ENST00000508117 MST1RQ04912 1400 aa14.28□□□□□ -0.12
CAST-220ENST00000508117 POLA2Q14181 598 aa14.28□□□□□ -0.12
CAST-220ENST00000508117 PTPRUQ92729 1446 aa14.28□□□□□ -0.12
CAST-220ENST00000508117 XRN1Q8IZH2 1706 aaKnown RBP14.27□□□□□ -0.12
CAST-220ENST00000508117 UNC13BO14795 1591 aa14.27□□□□□ -0.12
CAST-220ENST00000508117 QTRT2Q9H974 415 aaKnown RBP14.27□□□□□ -0.13
CAST-220ENST00000508117 E9PCH4 1651 aa14.26□□□□□ -0.13
CAST-220ENST00000508117 PNPLA6Q8IY17 1366 aa14.25□□□□□ -0.13
CAST-220ENST00000508117 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
CAST-220ENST00000508117 NGLY1Q96IV0 654 aa14.24□□□□□ -0.13
CAST-220ENST00000508117 SETBP1Q9Y6X0 1596 aa14.24□□□□□ -0.13
CAST-220ENST00000508117 ATAD2Q6PL18 1390 aa14.23□□□□□ -0.13
CAST-220ENST00000508117 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
CAST-220ENST00000508117 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
CAST-220ENST00000508117 C8orf37Q96NL8 207 aa14.23□□□□□ -0.13
CAST-220ENST00000508117 LAMC1P11047 1609 aa14.23□□□□□ -0.13
CAST-220ENST00000508117 ZBTB22O15209 634 aa14.22□□□□□ -0.13
CAST-220ENST00000508117 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms