RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ADGRF5Q8IZF2 1346 aa24.81■■□□□ 1.56
RNF4-209ENST00000507784 NEXMIFQ5QGS0 1516 aa24.81■■□□□ 1.56
RNF4-209ENST00000507784 VGFO15240 615 aaPredicted RBP24.8■■□□□ 1.56
RNF4-209ENST00000507784 SETD1BQ9UPS6 1966 aaKnown RBP24.8■■□□□ 1.56
RNF4-209ENST00000507784 MYOM2P54296 1465 aa24.79■■□□□ 1.56
RNF4-209ENST00000507784 KDM5AP29375 1690 aaKnown RBP24.78■■□□□ 1.56
RNF4-209ENST00000507784 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
RNF4-209ENST00000507784 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
RNF4-209ENST00000507784 SENP3Q9H4L4 574 aaPredicted RBP24.76■■□□□ 1.55
RNF4-209ENST00000507784 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
RNF4-209ENST00000507784 THEMISQ8N1K5 641 aaPredicted RBP24.74■■□□□ 1.55
RNF4-209ENST00000507784 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.74■■□□□ 1.55
RNF4-209ENST00000507784 RALGAPBQ86X10 1494 aa24.74■■□□□ 1.55
RNF4-209ENST00000507784 CEP170BQ9Y4F5 1589 aaPredicted RBP24.74■■□□□ 1.55
RNF4-209ENST00000507784 ROCK2O75116 1388 aaKnown RBP24.72■■□□□ 1.55
RNF4-209ENST00000507784 TMEM2Q9UHN6 1383 aa24.71■■□□□ 1.55
RNF4-209ENST00000507784 NBPF1Q3BBV0 1214 aa24.71■■□□□ 1.55
RNF4-209ENST00000507784 CARD11Q9BXL7 1154 aa24.71■■□□□ 1.55
RNF4-209ENST00000507784 CFAP70Q5T0N1 1121 aa24.7■■□□□ 1.54
RNF4-209ENST00000507784 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.54
RNF4-209ENST00000507784 ZFYVE9O95405 1425 aa24.69■■□□□ 1.54
RNF4-209ENST00000507784 ZNF142P52746 1687 aaPredicted RBP24.69■■□□□ 1.54
RNF4-209ENST00000507784 BCANQ96GW7 911 aa24.68■■□□□ 1.54
RNF4-209ENST00000507784 EID1Q9Y6B2 187 aa24.68■■□□□ 1.54
RNF4-209ENST00000507784 KIAA1210Q9ULL0 1709 aa24.68■■□□□ 1.54
RNF4-209ENST00000507784 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
RNF4-209ENST00000507784 TXNDC2Q86VQ3 553 aa24.67■■□□□ 1.54
RNF4-209ENST00000507784 PIK3C2GO75747 1445 aa24.67■■□□□ 1.54
RNF4-209ENST00000507784 EIF4G2P78344 907 aaKnown RBP eCLIP24.66■■□□□ 1.54
RNF4-209ENST00000507784 HIRIP3Q9BW71 556 aaPredicted RBP24.66■■□□□ 1.54
RNF4-209ENST00000507784 C14orf93Q9H972 538 aaKnown RBP24.65■■□□□ 1.54
RNF4-209ENST00000507784 HSPA5P11021 654 aaKnown RBP24.64■■□□□ 1.54
RNF4-209ENST00000507784 SLIT1O75093 1534 aa24.62■■□□□ 1.53
RNF4-209ENST00000507784 LTKP29376 864 aa24.62■■□□□ 1.53
RNF4-209ENST00000507784 ARHGAP23Q9P227 1491 aa24.61■■□□□ 1.53
RNF4-209ENST00000507784 LAMC1P11047 1609 aa24.6■■□□□ 1.53
RNF4-209ENST00000507784 GPRASP1Q5JY77 1395 aa24.59■■□□□ 1.53
RNF4-209ENST00000507784 USP47Q96K76 1375 aa24.59■■□□□ 1.53
RNF4-209ENST00000507784 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.53
RNF4-209ENST00000507784 ANKLE2Q86XL3 938 aa24.57■■□□□ 1.52
RNF4-209ENST00000507784 ALKQ9UM73 1620 aa24.57■■□□□ 1.52
RNF4-209ENST00000507784 IQGAP1P46940 1657 aa24.56■■□□□ 1.52
RNF4-209ENST00000507784 PLEKHG1Q9ULL1 1385 aa24.55■■□□□ 1.52
RNF4-209ENST00000507784 SETBP1Q9Y6X0 1596 aa24.55■■□□□ 1.52
RNF4-209ENST00000507784 SCAF11Q99590 1463 aaKnown RBP24.55■■□□□ 1.52
RNF4-209ENST00000507784 NRXN3Q9Y4C0 1643 aa24.52■■□□□ 1.52
RNF4-209ENST00000507784 ST20-MTHFSA0A0A6YYL1 179 aa24.51■■□□□ 1.51
RNF4-209ENST00000507784 STK26Q9P289 416 aa24.51■■□□□ 1.51
RNF4-209ENST00000507784 TRAK1Q9UPV9 953 aa24.5■■□□□ 1.51
RNF4-209ENST00000507784 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
RNF4-209ENST00000507784 SLC26A8Q96RN1 970 aa24.48■■□□□ 1.51
RNF4-209ENST00000507784 NCKAP5LQ9HCH0 1330 aa24.48■■□□□ 1.51
RNF4-209ENST00000507784 SETD1AO15047 1707 aaKnown RBP24.47■■□□□ 1.51
RNF4-209ENST00000507784 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
RNF4-209ENST00000507784 EIF3AQ14152 1382 aaKnown RBP24.47■■□□□ 1.51
RNF4-209ENST00000507784 HSPA2P54652 639 aa24.47■■□□□ 1.51
RNF4-209ENST00000507784 ASXL1Q8IXJ9 1541 aa24.46■■□□□ 1.51
RNF4-209ENST00000507784 ADAMTS13Q76LX8 1427 aa24.45■■□□□ 1.51
RNF4-209ENST00000507784 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
RNF4-209ENST00000507784 METP08581 1390 aa24.43■■□□□ 1.5
RNF4-209ENST00000507784 TBX22Q9Y458 520 aa24.42■■□□□ 1.5
RNF4-209ENST00000507784 LMTK3Q96Q04 1460 aa24.42■■□□□ 1.5
RNF4-209ENST00000507784 NPHP4O75161 1426 aaPredicted RBP24.42■■□□□ 1.5
RNF4-209ENST00000507784 LRPPRCP42704 1394 aaKnown RBP24.4■■□□□ 1.5
RNF4-209ENST00000507784 DIP2AQ14689 1571 aa24.39■■□□□ 1.5
RNF4-209ENST00000507784 POLR3GLQ9BT43 218 aa24.39■■□□□ 1.49
RNF4-209ENST00000507784 MED14O60244 1454 aa24.38■■□□□ 1.49
RNF4-209ENST00000507784 ARHGEF28Q8N1W1 1705 aaKnown RBP24.38■■□□□ 1.49
RNF4-209ENST00000507784 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
RNF4-209ENST00000507784 POGKQ9P215 609 aa24.38■■□□□ 1.49
RNF4-209ENST00000507784 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
RNF4-209ENST00000507784 SAFB2Q14151 953 aaKnown RBP eCLIP24.35■■□□□ 1.49
RNF4-209ENST00000507784 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
RNF4-209ENST00000507784 TMF1P82094 1093 aa24.34■■□□□ 1.49
RNF4-209ENST00000507784 TESK2Q96S53 571 aa24.34■■□□□ 1.49
RNF4-209ENST00000507784 ABCC11Q96J66 1382 aa24.33■■□□□ 1.49
RNF4-209ENST00000507784 PRAM1Q96QH2 718 aa24.33■■□□□ 1.49
RNF4-209ENST00000507784 AMOTL2Q9Y2J4 779 aa24.32■■□□□ 1.48
RNF4-209ENST00000507784 KNDC1Q76NI1 1749 aa24.32■■□□□ 1.48
RNF4-209ENST00000507784 CCDC7Q96M83 1385 aa24.31■■□□□ 1.48
RNF4-209ENST00000507784 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
RNF4-209ENST00000507784 WASHC2AQ641Q2 1341 aa24.31■■□□□ 1.48
RNF4-209ENST00000507784 DLC1Q96QB1 1528 aa24.3■■□□□ 1.48
RNF4-209ENST00000507784 WAPLQ7Z5K2 1190 aa24.3■■□□□ 1.48
RNF4-209ENST00000507784 KIF7Q2M1P5 1343 aa24.3■■□□□ 1.48
RNF4-209ENST00000507784 SLC24A1O60721 1099 aa24.29■■□□□ 1.48
RNF4-209ENST00000507784 DDX10Q13206 875 aaKnown RBP24.29■■□□□ 1.48
RNF4-209ENST00000507784 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
RNF4-209ENST00000507784 STRCQ7RTU9 1775 aa24.27■■□□□ 1.48
RNF4-209ENST00000507784 CHD2O14647 1828 aaKnown RBP24.27■■□□□ 1.48
RNF4-209ENST00000507784 SIRT1Q96EB6 747 aa24.27■■□□□ 1.48
RNF4-209ENST00000507784 MINK1Q8N4C8 1332 aaPredicted RBP24.27■■□□□ 1.48
RNF4-209ENST00000507784 DISP3Q9P2K9 1392 aa24.27■■□□□ 1.48
RNF4-209ENST00000507784 CPS1P31327 1500 aa24.25■■□□□ 1.47
RNF4-209ENST00000507784 DIEXFQ68CQ4 756 aaKnown RBP24.25■■□□□ 1.47
RNF4-209ENST00000507784 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
RNF4-209ENST00000507784 TECPR2O15040 1411 aa24.25■■□□□ 1.47
RNF4-209ENST00000507784 CDCA8Q53HL2 280 aa24.24■■□□□ 1.47
RNF4-209ENST00000507784 ROBO2Q9HCK4 1378 aa24.23■■□□□ 1.47
RNF4-209ENST00000507784 SBNO2Q9Y2G9 1366 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms