RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 CEP170BQ9Y4F5 1589 aaPredicted RBP13.08□□□□□ -0.32
SMAD1-207ENST00000507594 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
SMAD1-207ENST00000507594 PLA2R1Q13018 1463 aa13.08□□□□□ -0.32
SMAD1-207ENST00000507594 IDI1Q13907 227 aa13.07□□□□□ -0.32
SMAD1-207ENST00000507594 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
SMAD1-207ENST00000507594 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
SMAD1-207ENST00000507594 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
SMAD1-207ENST00000507594 MYO5BQ9ULV0 1848 aa13.06□□□□□ -0.32
SMAD1-207ENST00000507594 ZNF142P52746 1687 aaPredicted RBP13.06□□□□□ -0.32
SMAD1-207ENST00000507594 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
SMAD1-207ENST00000507594 PPP1R15AO75807 674 aaPredicted RBP13.05□□□□□ -0.32
SMAD1-207ENST00000507594 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
SMAD1-207ENST00000507594 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
SMAD1-207ENST00000507594 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
SMAD1-207ENST00000507594 BCANQ96GW7 911 aa13.03□□□□□ -0.32
SMAD1-207ENST00000507594 TMEM131LA2VDJ0 1609 aa13.02□□□□□ -0.32
SMAD1-207ENST00000507594 THEMISQ8N1K5 641 aaPredicted RBP13.02□□□□□ -0.33
SMAD1-207ENST00000507594 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
SMAD1-207ENST00000507594 KDM5AP29375 1690 aaKnown RBP13.01□□□□□ -0.33
SMAD1-207ENST00000507594 KDM2AQ9Y2K7 1162 aa13□□□□□ -0.33
SMAD1-207ENST00000507594 EID1Q9Y6B2 187 aa13□□□□□ -0.33
SMAD1-207ENST00000507594 RIMS2Q9UQ26 1411 aa12.99□□□□□ -0.33
SMAD1-207ENST00000507594 HDGFP51858 240 aaKnown RBP12.99□□□□□ -0.33
SMAD1-207ENST00000507594 HSPA2P54652 639 aa12.99□□□□□ -0.33
SMAD1-207ENST00000507594 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
SMAD1-207ENST00000507594 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
SMAD1-207ENST00000507594 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
SMAD1-207ENST00000507594 TMEM2Q9UHN6 1383 aa12.97□□□□□ -0.33
SMAD1-207ENST00000507594 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMAD1-207ENST00000507594 PPLO60437 1756 aa12.97□□□□□ -0.33
SMAD1-207ENST00000507594 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.33
SMAD1-207ENST00000507594 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.33
SMAD1-207ENST00000507594 TXNDC2Q86VQ3 553 aa12.96□□□□□ -0.33
SMAD1-207ENST00000507594 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
SMAD1-207ENST00000507594 NEURL4Q96JN8 1562 aa12.95□□□□□ -0.34
SMAD1-207ENST00000507594 NEXMIFQ5QGS0 1516 aa12.95□□□□□ -0.34
SMAD1-207ENST00000507594 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
SMAD1-207ENST00000507594 SCAF11Q99590 1463 aaKnown RBP12.94□□□□□ -0.34
SMAD1-207ENST00000507594 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
SMAD1-207ENST00000507594 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
SMAD1-207ENST00000507594 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
SMAD1-207ENST00000507594 SLIT1O75093 1534 aa12.93□□□□□ -0.34
SMAD1-207ENST00000507594 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
SMAD1-207ENST00000507594 MYOM2P54296 1465 aa12.91□□□□□ -0.34
SMAD1-207ENST00000507594 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
SMAD1-207ENST00000507594 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
SMAD1-207ENST00000507594 LTKP29376 864 aa12.9□□□□□ -0.34
SMAD1-207ENST00000507594 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
SMAD1-207ENST00000507594 ADGRF5Q8IZF2 1346 aa12.89□□□□□ -0.35
SMAD1-207ENST00000507594 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
SMAD1-207ENST00000507594 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
SMAD1-207ENST00000507594 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
SMAD1-207ENST00000507594 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
SMAD1-207ENST00000507594 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
SMAD1-207ENST00000507594 SLC26A8Q96RN1 970 aa12.86□□□□□ -0.35
SMAD1-207ENST00000507594 LAMC1P11047 1609 aa12.86□□□□□ -0.35
SMAD1-207ENST00000507594 PRAG1Q86YV5 1406 aa12.86□□□□□ -0.35
SMAD1-207ENST00000507594 STRCQ7RTU9 1775 aa12.85□□□□□ -0.35
SMAD1-207ENST00000507594 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
SMAD1-207ENST00000507594 PIK3C2GO75747 1445 aa12.85□□□□□ -0.35
SMAD1-207ENST00000507594 ROCK2O75116 1388 aaKnown RBP12.84□□□□□ -0.35
SMAD1-207ENST00000507594 CFAP70Q5T0N1 1121 aa12.84□□□□□ -0.35
SMAD1-207ENST00000507594 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
SMAD1-207ENST00000507594 DIP2AQ14689 1571 aa12.84□□□□□ -0.35
SMAD1-207ENST00000507594 SETBP1Q9Y6X0 1596 aa12.84□□□□□ -0.35
SMAD1-207ENST00000507594 ALKQ9UM73 1620 aa12.83□□□□□ -0.36
SMAD1-207ENST00000507594 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
SMAD1-207ENST00000507594 NRXN3Q9Y4C0 1643 aa12.82□□□□□ -0.36
SMAD1-207ENST00000507594 MED14O60244 1454 aa12.82□□□□□ -0.36
SMAD1-207ENST00000507594 NRXN1Q9ULB1 1477 aa12.82□□□□□ -0.36
SMAD1-207ENST00000507594 NBPF8Q3BBV2 869 aa12.81□□□□□ -0.36
SMAD1-207ENST00000507594 STK26Q9P289 416 aa12.81□□□□□ -0.36
SMAD1-207ENST00000507594 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
SMAD1-207ENST00000507594 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
SMAD1-207ENST00000507594 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
SMAD1-207ENST00000507594 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
SMAD1-207ENST00000507594 RALGAPBQ86X10 1494 aa12.79□□□□□ -0.36
SMAD1-207ENST00000507594 C14orf93Q9H972 538 aaKnown RBP12.79□□□□□ -0.36
SMAD1-207ENST00000507594 TBX22Q9Y458 520 aa12.78□□□□□ -0.36
SMAD1-207ENST00000507594 SETD1AO15047 1707 aaKnown RBP12.78□□□□□ -0.36
SMAD1-207ENST00000507594 NBPF1Q3BBV0 1214 aa12.77□□□□□ -0.37
SMAD1-207ENST00000507594 METP08581 1390 aa12.77□□□□□ -0.37
SMAD1-207ENST00000507594 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
SMAD1-207ENST00000507594 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
SMAD1-207ENST00000507594 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
SMAD1-207ENST00000507594 YTHDC2Q9H6S0 1430 aaKnown RBP12.76□□□□□ -0.37
SMAD1-207ENST00000507594 ASXL1Q8IXJ9 1541 aa12.76□□□□□ -0.37
SMAD1-207ENST00000507594 POGKQ9P215 609 aa12.75□□□□□ -0.37
SMAD1-207ENST00000507594 AMOTL2Q9Y2J4 779 aa12.75□□□□□ -0.37
SMAD1-207ENST00000507594 PIK3R4Q99570 1358 aa12.74□□□□□ -0.37
SMAD1-207ENST00000507594 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
SMAD1-207ENST00000507594 CHD2O14647 1828 aaKnown RBP12.74□□□□□ -0.37
SMAD1-207ENST00000507594 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
SMAD1-207ENST00000507594 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
SMAD1-207ENST00000507594 SAFB2Q14151 953 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMAD1-207ENST00000507594 KNDC1Q76NI1 1749 aa12.73□□□□□ -0.37
SMAD1-207ENST00000507594 KCNA6P17658 529 aa12.72□□□□□ -0.37
SMAD1-207ENST00000507594 PROSER2Q86WR7 435 aaPredicted RBP12.72□□□□□ -0.37
SMAD1-207ENST00000507594 PTPRUQ92729 1446 aa12.71□□□□□ -0.37
SMAD1-207ENST00000507594 XRN1Q8IZH2 1706 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms