RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 COL16A1Q07092 1604 aaPredicted RBP21.96■■□□□ 1.11
DDR1-260ENST00000507533 SLC52A1Q9NWF4 448 aa21.96■■□□□ 1.11
DDR1-260ENST00000507533 LMTK2Q8IWU2 1503 aa21.96■■□□□ 1.11
DDR1-260ENST00000507533 RXRBP28702 533 aa21.95■■□□□ 1.1
DDR1-260ENST00000507533 NOS1P29475 1434 aa21.95■■□□□ 1.1
DDR1-260ENST00000507533 ADGRB3O60242 1522 aa21.95■■□□□ 1.1
DDR1-260ENST00000507533 C14orf37Q86TY3 774 aa21.94■■□□□ 1.1
DDR1-260ENST00000507533 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
DDR1-260ENST00000507533 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
DDR1-260ENST00000507533 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
DDR1-260ENST00000507533 NCOA3Q9Y6Q9 1424 aa21.9■■□□□ 1.1
DDR1-260ENST00000507533 HDGFP51858 240 aaKnown RBP21.9■■□□□ 1.1
DDR1-260ENST00000507533 CADPS2Q86UW7 1296 aa21.89■■□□□ 1.09
DDR1-260ENST00000507533 CHIC2Q9UKJ5 165 aa21.89■■□□□ 1.09
DDR1-260ENST00000507533 TBX22Q9Y458 520 aa21.89■■□□□ 1.09
DDR1-260ENST00000507533 ATF3P18847 181 aa21.88■■□□□ 1.09
DDR1-260ENST00000507533 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
DDR1-260ENST00000507533 DAPK1P53355 1430 aa21.88■■□□□ 1.09
DDR1-260ENST00000507533 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
DDR1-260ENST00000507533 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
DDR1-260ENST00000507533 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
DDR1-260ENST00000507533 C19orf44Q9H6X5 657 aa21.87■■□□□ 1.09
DDR1-260ENST00000507533 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
DDR1-260ENST00000507533 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
DDR1-260ENST00000507533 CROCC2H7BZ55 1655 aa21.86■■□□□ 1.09
DDR1-260ENST00000507533 CHD2O14647 1828 aaKnown RBP21.86■■□□□ 1.09
DDR1-260ENST00000507533 AHDC1Q5TGY3 1603 aaPredicted RBP21.85■■□□□ 1.09
DDR1-260ENST00000507533 CDK12Q9NYV4 1490 aaPredicted RBP21.84■■□□□ 1.09
DDR1-260ENST00000507533 SHPRHQ149N8 1683 aa21.83■■□□□ 1.09
DDR1-260ENST00000507533 AFF2P51816 1311 aa21.82■■□□□ 1.08
DDR1-260ENST00000507533 PTPN23Q9H3S7 1636 aa21.82■■□□□ 1.08
DDR1-260ENST00000507533 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
DDR1-260ENST00000507533 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.81■■□□□ 1.08
DDR1-260ENST00000507533 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
DDR1-260ENST00000507533 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.79■■□□□ 1.08
DDR1-260ENST00000507533 RPRD2Q5VT52 1461 aaKnown RBP21.78■■□□□ 1.08
DDR1-260ENST00000507533 NUTM2DQ5VT03 806 aaPredicted RBP21.78■■□□□ 1.08
DDR1-260ENST00000507533 ADAMTS13Q76LX8 1427 aa21.77■■□□□ 1.08
DDR1-260ENST00000507533 PIK3R4Q99570 1358 aa21.76■■□□□ 1.07
DDR1-260ENST00000507533 DIP2AQ14689 1571 aa21.76■■□□□ 1.07
DDR1-260ENST00000507533 QTRT2Q9H974 415 aaKnown RBP21.76■■□□□ 1.07
DDR1-260ENST00000507533 SRCAPQ6ZRS2 3230 aa21.76■■□□□ 1.07
DDR1-260ENST00000507533 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
DDR1-260ENST00000507533 TMEM131LA2VDJ0 1609 aa21.74■■□□□ 1.07
DDR1-260ENST00000507533 RBM6P78332 1123 aaKnown RBP21.74■■□□□ 1.07
DDR1-260ENST00000507533 C8orf37Q96NL8 207 aa21.74■■□□□ 1.07
DDR1-260ENST00000507533 RGS12O14924 1447 aa21.73■■□□□ 1.07
DDR1-260ENST00000507533 MYO5BQ9ULV0 1848 aa21.73■■□□□ 1.07
DDR1-260ENST00000507533 GCC2Q8IWJ2 1684 aa21.72■■□□□ 1.07
DDR1-260ENST00000507533 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
DDR1-260ENST00000507533 LRRC59Q96AG4 307 aaKnown RBP21.72■■□□□ 1.07
DDR1-260ENST00000507533 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
DDR1-260ENST00000507533 APLP2Q06481 763 aa21.7■■□□□ 1.06
DDR1-260ENST00000507533 PTPRUQ92729 1446 aa21.69■■□□□ 1.06
DDR1-260ENST00000507533 ASXL1Q8IXJ9 1541 aa21.69■■□□□ 1.06
DDR1-260ENST00000507533 DCCP43146 1447 aa21.68■■□□□ 1.06
DDR1-260ENST00000507533 ANKRD50Q9ULJ7 1429 aa21.68■■□□□ 1.06
DDR1-260ENST00000507533 ADGRL2O95490 1459 aa21.68■■□□□ 1.06
DDR1-260ENST00000507533 TRPM2O94759 1503 aa21.66■■□□□ 1.06
DDR1-260ENST00000507533 MST1RQ04912 1400 aa21.65■■□□□ 1.06
DDR1-260ENST00000507533 DDX17Q92841 729 aaKnown RBP21.65■■□□□ 1.06
DDR1-260ENST00000507533 NGLY1Q96IV0 654 aa21.65■■□□□ 1.06
DDR1-260ENST00000507533 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.06
DDR1-260ENST00000507533 ATAD2Q6PL18 1390 aa21.62■■□□□ 1.05
DDR1-260ENST00000507533 ADAMTS2O95450 1211 aa21.62■■□□□ 1.05
DDR1-260ENST00000507533 FAM50AQ14320 339 aaKnown RBP21.61■■□□□ 1.05
DDR1-260ENST00000507533 FOXD1Q16676 465 aa21.61■■□□□ 1.05
DDR1-260ENST00000507533 ZRANB1Q9UGI0 708 aa21.61■■□□□ 1.05
DDR1-260ENST00000507533 NHSL1Q5SYE7 1610 aa21.6■■□□□ 1.05
DDR1-260ENST00000507533 UNC13BO14795 1591 aa21.57■■□□□ 1.04
DDR1-260ENST00000507533 USP21Q9UK80 565 aa21.57■■□□□ 1.04
DDR1-260ENST00000507533 TRPC5Q9UL62 973 aaPredicted RBP21.55■■□□□ 1.04
DDR1-260ENST00000507533 XRN1Q8IZH2 1706 aaKnown RBP21.54■■□□□ 1.04
DDR1-260ENST00000507533 E9PCH4 1651 aa21.53■■□□□ 1.04
DDR1-260ENST00000507533 METP08581 1390 aa21.53■■□□□ 1.04
DDR1-260ENST00000507533 ADGRL3Q9HAR2 1447 aa21.53■■□□□ 1.04
DDR1-260ENST00000507533 SETBP1Q9Y6X0 1596 aa21.5■■□□□ 1.03
DDR1-260ENST00000507533 ZNF326Q5BKZ1 582 aaKnown RBP21.5■■□□□ 1.03
DDR1-260ENST00000507533 FNBP4Q8N3X1 1017 aaPredicted RBP21.5■■□□□ 1.03
DDR1-260ENST00000507533 NRXN3Q9Y4C0 1643 aa21.5■■□□□ 1.03
DDR1-260ENST00000507533 C1orf167Q5SNV9 1468 aa21.49■■□□□ 1.03
DDR1-260ENST00000507533 CCDC125Q86Z20 511 aa21.48■■□□□ 1.03
DDR1-260ENST00000507533 SOS2Q07890 1332 aaPredicted RBP21.48■■□□□ 1.03
DDR1-260ENST00000507533 NUP155O75694 1391 aa21.47■■□□□ 1.03
DDR1-260ENST00000507533 ATRNO75882 1429 aa21.46■■□□□ 1.03
DDR1-260ENST00000507533 PTCH1Q13635 1447 aa21.46■■□□□ 1.03
DDR1-260ENST00000507533 ORAI2Q96SN7 254 aa21.46■■□□□ 1.03
DDR1-260ENST00000507533 IQGAP3Q86VI3 1631 aa21.44■■□□□ 1.02
DDR1-260ENST00000507533 NALCNQ8IZF0 1738 aa21.42■■□□□ 1.02
DDR1-260ENST00000507533 EP400Q96L91 3159 aa21.41■■□□□ 1.02
DDR1-260ENST00000507533 LAMC1P11047 1609 aa21.4■■□□□ 1.02
DDR1-260ENST00000507533 ROCK1Q13464 1354 aa21.39■■□□□ 1.02
DDR1-260ENST00000507533 GJD4Q96KN9 370 aaPredicted RBP21.37■■□□□ 1.01
DDR1-260ENST00000507533 BCL9LQ86UU0 1499 aa21.37■■□□□ 1.01
DDR1-260ENST00000507533 ROBO2Q9HCK4 1378 aa21.35■■□□□ 1.01
DDR1-260ENST00000507533 MYOM2P54296 1465 aa21.34■■□□□ 1.01
DDR1-260ENST00000507533 COL22A1Q8NFW1 1626 aaPredicted RBP21.33■■□□□ 1
DDR1-260ENST00000507533 NEXMIFQ5QGS0 1516 aa21.32■■□□□ 1
DDR1-260ENST00000507533 NPHP3Q7Z494 1330 aa21.31■■□□□ 1
DDR1-260ENST00000507533 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms