RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 ADGRB3O60242 1522 aa14.87□□□□□ -0.03
COL6A4P2-203ENST00000507516 ABCC5O15440 1437 aa14.87□□□□□ -0.03
COL6A4P2-203ENST00000507516 C14orf37Q86TY3 774 aa14.87□□□□□ -0.03
COL6A4P2-203ENST00000507516 SLC52A1Q9NWF4 448 aa14.87□□□□□ -0.03
COL6A4P2-203ENST00000507516 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
COL6A4P2-203ENST00000507516 NOS1P29475 1434 aa14.86□□□□□ -0.03
COL6A4P2-203ENST00000507516 KANK4Q5T7N3 995 aaPredicted RBP14.86□□□□□ -0.03
COL6A4P2-203ENST00000507516 PLEKHG1Q9ULL1 1385 aa14.85□□□□□ -0.03
COL6A4P2-203ENST00000507516 PPP1R15AO75807 674 aaPredicted RBP14.85□□□□□ -0.03
COL6A4P2-203ENST00000507516 NCOA3Q9Y6Q9 1424 aa14.84□□□□□ -0.03
COL6A4P2-203ENST00000507516 CADPS2Q86UW7 1296 aa14.84□□□□□ -0.03
COL6A4P2-203ENST00000507516 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.03
COL6A4P2-203ENST00000507516 SRCAPQ6ZRS2 3230 aa14.83□□□□□ -0.03
COL6A4P2-203ENST00000507516 CDK12Q9NYV4 1490 aaPredicted RBP14.83□□□□□ -0.03
COL6A4P2-203ENST00000507516 ATF3P18847 181 aa14.83□□□□□ -0.04
COL6A4P2-203ENST00000507516 HDGFP51858 240 aaKnown RBP14.83□□□□□ -0.04
COL6A4P2-203ENST00000507516 ZFYVE9O95405 1425 aa14.83□□□□□ -0.04
COL6A4P2-203ENST00000507516 NUTM2BA6NNL0 878 aaPredicted RBP14.82□□□□□ -0.04
COL6A4P2-203ENST00000507516 NUTM2EB1AL46 878 aaPredicted RBP14.82□□□□□ -0.04
COL6A4P2-203ENST00000507516 NUTM2AQ8IVF1 878 aaPredicted RBP14.82□□□□□ -0.04
COL6A4P2-203ENST00000507516 C19orf44Q9H6X5 657 aa14.82□□□□□ -0.04
COL6A4P2-203ENST00000507516 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
COL6A4P2-203ENST00000507516 AHDC1Q5TGY3 1603 aaPredicted RBP14.81□□□□□ -0.04
COL6A4P2-203ENST00000507516 ANKRD30AQ9BXX3 1397 aa14.81□□□□□ -0.04
COL6A4P2-203ENST00000507516 DAPK1P53355 1430 aa14.81□□□□□ -0.04
COL6A4P2-203ENST00000507516 RIMS2Q9UQ26 1411 aa14.81□□□□□ -0.04
COL6A4P2-203ENST00000507516 AFF2P51816 1311 aa14.8□□□□□ -0.04
COL6A4P2-203ENST00000507516 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
COL6A4P2-203ENST00000507516 SHPRHQ149N8 1683 aa14.78□□□□□ -0.04
COL6A4P2-203ENST00000507516 BRINP3Q76B58 766 aa14.78□□□□□ -0.04
COL6A4P2-203ENST00000507516 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL6A4P2-203ENST00000507516 CROCC2H7BZ55 1655 aa14.77□□□□□ -0.05
COL6A4P2-203ENST00000507516 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
COL6A4P2-203ENST00000507516 RGS12O14924 1447 aa14.75□□□□□ -0.05
COL6A4P2-203ENST00000507516 ADAMTS13Q76LX8 1427 aa14.75□□□□□ -0.05
COL6A4P2-203ENST00000507516 PIK3R4Q99570 1358 aa14.75□□□□□ -0.05
COL6A4P2-203ENST00000507516 CHD2O14647 1828 aaKnown RBP14.75□□□□□ -0.05
COL6A4P2-203ENST00000507516 PTPN23Q9H3S7 1636 aa14.74□□□□□ -0.05
COL6A4P2-203ENST00000507516 DIP2AQ14689 1571 aa14.74□□□□□ -0.05
COL6A4P2-203ENST00000507516 CHGAP10645 457 aaKnown RBP14.74□□□□□ -0.05
COL6A4P2-203ENST00000507516 RBM6P78332 1123 aaKnown RBP14.74□□□□□ -0.05
COL6A4P2-203ENST00000507516 NUTM2DQ5VT03 806 aaPredicted RBP14.74□□□□□ -0.05
COL6A4P2-203ENST00000507516 QTRT2Q9H974 415 aaKnown RBP14.74□□□□□ -0.05
COL6A4P2-203ENST00000507516 C8orf37Q96NL8 207 aa14.73□□□□□ -0.05
COL6A4P2-203ENST00000507516 SETD5Q9C0A6 1442 aa14.73□□□□□ -0.05
COL6A4P2-203ENST00000507516 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.72□□□□□ -0.05
COL6A4P2-203ENST00000507516 AMOTL2Q9Y2J4 779 aa14.72□□□□□ -0.05
COL6A4P2-203ENST00000507516 LRRC59Q96AG4 307 aaKnown RBP14.71□□□□□ -0.05
COL6A4P2-203ENST00000507516 DCCP43146 1447 aa14.71□□□□□ -0.05
COL6A4P2-203ENST00000507516 ASXL1Q8IXJ9 1541 aa14.71□□□□□ -0.06
COL6A4P2-203ENST00000507516 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
COL6A4P2-203ENST00000507516 NGLY1Q96IV0 654 aa14.69□□□□□ -0.06
COL6A4P2-203ENST00000507516 ATAD2Q6PL18 1390 aa14.69□□□□□ -0.06
COL6A4P2-203ENST00000507516 PTPRUQ92729 1446 aa14.68□□□□□ -0.06
COL6A4P2-203ENST00000507516 ANKRD50Q9ULJ7 1429 aa14.68□□□□□ -0.06
COL6A4P2-203ENST00000507516 FOXD1Q16676 465 aa14.68□□□□□ -0.06
COL6A4P2-203ENST00000507516 ADGRL2O95490 1459 aa14.68□□□□□ -0.06
COL6A4P2-203ENST00000507516 GCC2Q8IWJ2 1684 aa14.68□□□□□ -0.06
COL6A4P2-203ENST00000507516 MST1RQ04912 1400 aa14.67□□□□□ -0.06
COL6A4P2-203ENST00000507516 TRPM2O94759 1503 aa14.67□□□□□ -0.06
COL6A4P2-203ENST00000507516 APLP2Q06481 763 aa14.67□□□□□ -0.06
COL6A4P2-203ENST00000507516 PNPLA6Q8IY17 1366 aa14.67□□□□□ -0.06
COL6A4P2-203ENST00000507516 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
COL6A4P2-203ENST00000507516 ADAMTS2O95450 1211 aa14.65□□□□□ -0.06
COL6A4P2-203ENST00000507516 DDX17Q92841 729 aaKnown RBP14.65□□□□□ -0.06
COL6A4P2-203ENST00000507516 LOC105371045A0A1W2PR82 267 aa14.63□□□□□ -0.07
COL6A4P2-203ENST00000507516 MYO5BQ9ULV0 1848 aa14.63□□□□□ -0.07
COL6A4P2-203ENST00000507516 USP21Q9UK80 565 aa14.62□□□□□ -0.07
COL6A4P2-203ENST00000507516 NHSL1Q5SYE7 1610 aa14.62□□□□□ -0.07
COL6A4P2-203ENST00000507516 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
COL6A4P2-203ENST00000507516 TRPC5Q9UL62 973 aaPredicted RBP14.61□□□□□ -0.07
COL6A4P2-203ENST00000507516 ADGRL3Q9HAR2 1447 aa14.6□□□□□ -0.07
COL6A4P2-203ENST00000507516 UNC13BO14795 1591 aa14.6□□□□□ -0.07
COL6A4P2-203ENST00000507516 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.07
COL6A4P2-203ENST00000507516 SETBP1Q9Y6X0 1596 aa14.58□□□□□ -0.08
COL6A4P2-203ENST00000507516 METP08581 1390 aa14.58□□□□□ -0.08
COL6A4P2-203ENST00000507516 CCDC125Q86Z20 511 aa14.57□□□□□ -0.08
COL6A4P2-203ENST00000507516 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
COL6A4P2-203ENST00000507516 ATRNO75882 1429 aa14.56□□□□□ -0.08
COL6A4P2-203ENST00000507516 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
COL6A4P2-203ENST00000507516 C1orf167Q5SNV9 1468 aa14.56□□□□□ -0.08
COL6A4P2-203ENST00000507516 SOS2Q07890 1332 aaPredicted RBP14.55□□□□□ -0.08
COL6A4P2-203ENST00000507516 ZNF326Q5BKZ1 582 aaKnown RBP14.54□□□□□ -0.08
COL6A4P2-203ENST00000507516 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
COL6A4P2-203ENST00000507516 E9PCH4 1651 aa14.54□□□□□ -0.08
COL6A4P2-203ENST00000507516 ORAI2Q96SN7 254 aa14.53□□□□□ -0.08
COL6A4P2-203ENST00000507516 NUP155O75694 1391 aa14.52□□□□□ -0.08
COL6A4P2-203ENST00000507516 EP400Q96L91 3159 aa14.52□□□□□ -0.08
COL6A4P2-203ENST00000507516 IQGAP3Q86VI3 1631 aa14.5□□□□□ -0.09
COL6A4P2-203ENST00000507516 NALCNQ8IZF0 1738 aa14.49□□□□□ -0.09
COL6A4P2-203ENST00000507516 LAMC1P11047 1609 aa14.48□□□□□ -0.09
COL6A4P2-203ENST00000507516 GJD4Q96KN9 370 aaPredicted RBP14.48□□□□□ -0.09
COL6A4P2-203ENST00000507516 MYOM2P54296 1465 aa14.48□□□□□ -0.09
COL6A4P2-203ENST00000507516 BCL9LQ86UU0 1499 aa14.48□□□□□ -0.09
COL6A4P2-203ENST00000507516 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
COL6A4P2-203ENST00000507516 BLMP54132 1417 aaPredicted RBP14.47□□□□□ -0.09
COL6A4P2-203ENST00000507516 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
COL6A4P2-203ENST00000507516 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
COL6A4P2-203ENST00000507516 COL22A1Q8NFW1 1626 aaPredicted RBP14.44□□□□□ -0.1
COL6A4P2-203ENST00000507516 DEFB132Q7Z7B7 95 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms