RNA–Protein interactions for RNA: ENST00000507464.5

LDB2-209, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-209ENST00000507464 PIK3C2BO00750 1634 aa16.35■□□□□ 0.21
LDB2-209ENST00000507464 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
LDB2-209ENST00000507464 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.21
LDB2-209ENST00000507464 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.21
LDB2-209ENST00000507464 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.2
LDB2-209ENST00000507464 SYNMO15061 1565 aa16.33■□□□□ 0.2
LDB2-209ENST00000507464 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
LDB2-209ENST00000507464 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
LDB2-209ENST00000507464 TESK2Q96S53 571 aa16.31■□□□□ 0.2
LDB2-209ENST00000507464 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
LDB2-209ENST00000507464 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
LDB2-209ENST00000507464 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
LDB2-209ENST00000507464 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
LDB2-209ENST00000507464 PPLO60437 1756 aa16.29■□□□□ 0.2
LDB2-209ENST00000507464 ADGRF5Q8IZF2 1346 aa16.29■□□□□ 0.2
LDB2-209ENST00000507464 PREX1Q8TCU6 1659 aa16.28■□□□□ 0.2
LDB2-209ENST00000507464 CHGAP10645 457 aaKnown RBP16.28■□□□□ 0.2
LDB2-209ENST00000507464 EIF3AQ14152 1382 aaKnown RBP16.27■□□□□ 0.2
LDB2-209ENST00000507464 TMF1P82094 1093 aa16.27■□□□□ 0.19
LDB2-209ENST00000507464 CFAP65Q6ZU64 1925 aaKnown RBP16.26■□□□□ 0.19
LDB2-209ENST00000507464 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
LDB2-209ENST00000507464 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
LDB2-209ENST00000507464 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
LDB2-209ENST00000507464 PIK3C2GO75747 1445 aa16.25■□□□□ 0.19
LDB2-209ENST00000507464 DISP3Q9P2K9 1392 aa16.25■□□□□ 0.19
LDB2-209ENST00000507464 ERVK-7P63135 1459 aa16.24■□□□□ 0.19
LDB2-209ENST00000507464 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
LDB2-209ENST00000507464 IDI1Q13907 227 aa16.23■□□□□ 0.19
LDB2-209ENST00000507464 NEXMIFQ5QGS0 1516 aa16.23■□□□□ 0.19
LDB2-209ENST00000507464 CLTCQ00610 1675 aaKnown RBP16.22■□□□□ 0.19
LDB2-209ENST00000507464 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
LDB2-209ENST00000507464 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
LDB2-209ENST00000507464 KTN1Q86UP2 1357 aaKnown RBP16.22■□□□□ 0.19
LDB2-209ENST00000507464 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
LDB2-209ENST00000507464 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
LDB2-209ENST00000507464 TMEM131LA2VDJ0 1609 aa16.2■□□□□ 0.18
LDB2-209ENST00000507464 GTF3C3Q9Y5Q9 886 aa16.2■□□□□ 0.18
LDB2-209ENST00000507464 SPATA31D1Q6ZQQ2 1576 aa16.19■□□□□ 0.18
LDB2-209ENST00000507464 MYO3AQ8NEV4 1616 aa16.18■□□□□ 0.18
LDB2-209ENST00000507464 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
LDB2-209ENST00000507464 ADGRB1O14514 1584 aa16.18■□□□□ 0.18
LDB2-209ENST00000507464 SBNO2Q9Y2G9 1366 aa16.17■□□□□ 0.18
LDB2-209ENST00000507464 RALBP1Q15311 655 aa16.16■□□□□ 0.18
LDB2-209ENST00000507464 MRS2Q9HD23 443 aa16.16■□□□□ 0.18
LDB2-209ENST00000507464 MLECQ14165 292 aa16.16■□□□□ 0.18
LDB2-209ENST00000507464 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
LDB2-209ENST00000507464 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
LDB2-209ENST00000507464 ESF1Q9H501 851 aaKnown RBP16.14■□□□□ 0.17
LDB2-209ENST00000507464 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
LDB2-209ENST00000507464 MYO5BQ9ULV0 1848 aa16.12■□□□□ 0.17
LDB2-209ENST00000507464 PANK3Q9H999 370 aa16.12■□□□□ 0.17
LDB2-209ENST00000507464 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
LDB2-209ENST00000507464 KDM5AP29375 1690 aaKnown RBP16.11■□□□□ 0.17
LDB2-209ENST00000507464 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
LDB2-209ENST00000507464 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
LDB2-209ENST00000507464 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
LDB2-209ENST00000507464 A2ML1A8K2U0 1454 aa16.09■□□□□ 0.17
LDB2-209ENST00000507464 BRD4O60885 1362 aaPredicted RBP16.09■□□□□ 0.17
LDB2-209ENST00000507464 NUTM2DQ5VT03 806 aaPredicted RBP16.09■□□□□ 0.17
LDB2-209ENST00000507464 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
LDB2-209ENST00000507464 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
LDB2-209ENST00000507464 TMEM132EQ6IEE7 984 aa16.08■□□□□ 0.16
LDB2-209ENST00000507464 MYOM1P52179 1685 aa16.07■□□□□ 0.16
LDB2-209ENST00000507464 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
LDB2-209ENST00000507464 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
LDB2-209ENST00000507464 QRICH2Q9H0J4 1663 aa16.07■□□□□ 0.16
LDB2-209ENST00000507464 CNGB1Q14028 1251 aaPredicted RBP16.06■□□□□ 0.16
LDB2-209ENST00000507464 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
LDB2-209ENST00000507464 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
LDB2-209ENST00000507464 NLRP13Q86W25 1043 aa16.04■□□□□ 0.16
LDB2-209ENST00000507464 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
LDB2-209ENST00000507464 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
LDB2-209ENST00000507464 TNRQ92752 1358 aa16.04■□□□□ 0.16
LDB2-209ENST00000507464 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
LDB2-209ENST00000507464 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
LDB2-209ENST00000507464 KNSTRNQ9Y448 316 aa16.03■□□□□ 0.16
LDB2-209ENST00000507464 ALKQ9UM73 1620 aa16.03■□□□□ 0.16
LDB2-209ENST00000507464 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.16
LDB2-209ENST00000507464 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.15
LDB2-209ENST00000507464 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
LDB2-209ENST00000507464 YTHDC2Q9H6S0 1430 aaKnown RBP16■□□□□ 0.15
LDB2-209ENST00000507464 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
LDB2-209ENST00000507464 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
LDB2-209ENST00000507464 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
LDB2-209ENST00000507464 ZBED9Q6R2W3 1325 aa16■□□□□ 0.15
LDB2-209ENST00000507464 HDGFP51858 240 aaKnown RBP15.99■□□□□ 0.15
LDB2-209ENST00000507464 EVC2Q86UK5 1308 aa15.99■□□□□ 0.15
LDB2-209ENST00000507464 PTPRMP28827 1452 aa15.98■□□□□ 0.15
LDB2-209ENST00000507464 NLRP1Q9C000 1473 aa15.98■□□□□ 0.15
LDB2-209ENST00000507464 DLC1Q96QB1 1528 aa15.96■□□□□ 0.15
LDB2-209ENST00000507464 TULP4Q9NRJ4 1543 aa15.96■□□□□ 0.15
LDB2-209ENST00000507464 UBR1Q8IWV7 1749 aa15.96■□□□□ 0.15
LDB2-209ENST00000507464 POTEHQ6S545 545 aa15.96■□□□□ 0.14
LDB2-209ENST00000507464 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.14
LDB2-209ENST00000507464 SETD1AO15047 1707 aaKnown RBP15.95■□□□□ 0.14
LDB2-209ENST00000507464 STK26Q9P289 416 aa15.95■□□□□ 0.14
LDB2-209ENST00000507464 INSRP06213 1382 aa15.94■□□□□ 0.14
LDB2-209ENST00000507464 TMEM2Q9UHN6 1383 aa15.94■□□□□ 0.14
LDB2-209ENST00000507464 NRXN3Q9Y4C0 1643 aa15.94■□□□□ 0.14
LDB2-209ENST00000507464 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms