RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CDCA7LQ96GN5 454 aa7.32□□□□□ -1.24
LSM6-205ENST00000507449 TIMELESSQ9UNS1 1208 aa7.32□□□□□ -1.24
LSM6-205ENST00000507449 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
LSM6-205ENST00000507449 KCNC4Q03721 635 aa7.31□□□□□ -1.24
LSM6-205ENST00000507449 PXYLP1Q8TE99 480 aa7.31□□□□□ -1.24
LSM6-205ENST00000507449 TSKSQ9UJT2 592 aa7.31□□□□□ -1.24
LSM6-205ENST00000507449 PPP1R3GB7ZBB8 358 aa7.3□□□□□ -1.24
LSM6-205ENST00000507449 OATP04181 439 aa7.29□□□□□ -1.24
LSM6-205ENST00000507449 PTPREP23469 700 aa7.29□□□□□ -1.24
LSM6-205ENST00000507449 ANKK1Q8NFD2 765 aa7.28□□□□□ -1.24
LSM6-205ENST00000507449 ZNF775Q96BV0 537 aaPredicted RBP7.28□□□□□ -1.24
LSM6-205ENST00000507449 DDRGK1Q96HY6 314 aa7.28□□□□□ -1.24
LSM6-205ENST00000507449 GPCPD1Q9NPB8 672 aa7.28□□□□□ -1.24
LSM6-205ENST00000507449 CLCN1P35523 988 aa7.27□□□□□ -1.25
LSM6-205ENST00000507449 EYA1Q99502 592 aa7.27□□□□□ -1.25
LSM6-205ENST00000507449 TRIM6-TRIM34B2RNG4 842 aa7.26□□□□□ -1.25
LSM6-205ENST00000507449 BHMG1C9JSJ3 638 aaPredicted RBP7.26□□□□□ -1.25
LSM6-205ENST00000507449 PROX2Q3B8N5 592 aa7.26□□□□□ -1.25
LSM6-205ENST00000507449 FAM217BQ9NTX9 383 aaPredicted RBP7.26□□□□□ -1.25
LSM6-205ENST00000507449 SSTR3P32745 418 aaPredicted RBP7.25□□□□□ -1.25
LSM6-205ENST00000507449 RCCD1A6NED2 376 aa7.24□□□□□ -1.25
LSM6-205ENST00000507449 NUDT18Q6ZVK8 323 aa7.24□□□□□ -1.25
LSM6-205ENST00000507449 RBM46Q8TBY0 533 aaKnown RBP7.24□□□□□ -1.25
LSM6-205ENST00000507449 ZBED2Q9BTP6 218 aa7.24□□□□□ -1.25
LSM6-205ENST00000507449 DAXXQ9UER7 740 aaPredicted RBP7.24□□□□□ -1.25
LSM6-205ENST00000507449 LCE2BO14633 110 aa7.23□□□□□ -1.25
LSM6-205ENST00000507449 TATDN2Q93075 761 aa7.23□□□□□ -1.25
LSM6-205ENST00000507449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.22□□□□□ -1.25
LSM6-205ENST00000507449 SMAPO00193 183 aa7.22□□□□□ -1.25
LSM6-205ENST00000507449 PNMA3Q9UL41 463 aa7.22□□□□□ -1.25
LSM6-205ENST00000507449 NBPF26B4DH59 902 aa7.21□□□□□ -1.26
LSM6-205ENST00000507449 BEGAINQ9BUH8 593 aa7.21□□□□□ -1.26
LSM6-205ENST00000507449 ONECUT3O60422 494 aaPredicted RBP7.2□□□□□ -1.26
LSM6-205ENST00000507449 PACS2Q86VP3 889 aa7.2□□□□□ -1.26
LSM6-205ENST00000507449 GOPCQ9HD26 462 aa7.2□□□□□ -1.26
LSM6-205ENST00000507449 KIAA1468Q9P260 1216 aa7.2□□□□□ -1.26
LSM6-205ENST00000507449 SH3D19Q5HYK7 790 aa7.19□□□□□ -1.26
LSM6-205ENST00000507449 DNAJB2P25686 324 aa7.18□□□□□ -1.26
LSM6-205ENST00000507449 TMEM134Q9H6X4 195 aa7.18□□□□□ -1.26
LSM6-205ENST00000507449 CD46P15529 392 aa7.17□□□□□ -1.26
LSM6-205ENST00000507449 C14orf37Q86TY3 774 aa7.17□□□□□ -1.26
LSM6-205ENST00000507449 PRKD2Q9BZL6 878 aa7.17□□□□□ -1.26
LSM6-205ENST00000507449 V9GY48 417 aaPredicted RBP7.17□□□□□ -1.26
LSM6-205ENST00000507449 RABGEF1Q9UJ41 708 aa7.16□□□□□ -1.26
LSM6-205ENST00000507449 MYSM1Q5VVJ2 828 aa7.15□□□□□ -1.26
LSM6-205ENST00000507449 PROCA1Q8NCQ7 364 aaPredicted RBP7.15□□□□□ -1.26
LSM6-205ENST00000507449 TBC1D2Q9BYX2 928 aa7.15□□□□□ -1.26
LSM6-205ENST00000507449 SEPT9Q9UHD8 586 aaPredicted RBP7.15□□□□□ -1.26
LSM6-205ENST00000507449 DDX11L8A8MPP1 907 aa7.14□□□□□ -1.27
LSM6-205ENST00000507449 SKIV2LQ15477 1246 aaKnown RBP7.14□□□□□ -1.27
LSM6-205ENST00000507449 LAPTM4BQ86VI4 370 aa7.14□□□□□ -1.27
LSM6-205ENST00000507449 PDZRN3Q9UPQ7 1066 aa7.14□□□□□ -1.27
LSM6-205ENST00000507449 SOWAHBA6NEL2 793 aa7.13□□□□□ -1.27
LSM6-205ENST00000507449 FBXO31Q5XUX0 539 aaPredicted RBP7.13□□□□□ -1.27
LSM6-205ENST00000507449 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
LSM6-205ENST00000507449 SPIRE2Q8WWL2 714 aa7.13□□□□□ -1.27
LSM6-205ENST00000507449 PCMTD1Q96MG8 357 aaPredicted RBP7.13□□□□□ -1.27
LSM6-205ENST00000507449 RSPH6AQ9H0K4 717 aa7.13□□□□□ -1.27
LSM6-205ENST00000507449 POLR3EQ9NVU0 708 aa7.13□□□□□ -1.27
LSM6-205ENST00000507449 STK17AQ9UEE5 414 aa7.13□□□□□ -1.27
LSM6-205ENST00000507449 SWT1Q5T5J6 900 aaKnown RBP7.12□□□□□ -1.27
LSM6-205ENST00000507449 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.12□□□□□ -1.27
LSM6-205ENST00000507449 SLC10A3P09131 477 aa7.11□□□□□ -1.27
LSM6-205ENST00000507449 SULF1Q8IWU6 871 aa7.11□□□□□ -1.27
LSM6-205ENST00000507449 LIMD1Q9UGP4 676 aa7.11□□□□□ -1.27
LSM6-205ENST00000507449 BCAMP50895 628 aa7.1□□□□□ -1.27
LSM6-205ENST00000507449 FAM98CQ17RN3 349 aaKnown RBP7.1□□□□□ -1.27
LSM6-205ENST00000507449 CLK2P49760 499 aaKnown RBP7.09□□□□□ -1.27
LSM6-205ENST00000507449 MOXD2PA6NHM9 499 aa7.08□□□□□ -1.28
LSM6-205ENST00000507449 TREML4Q6UXN2 200 aa7.08□□□□□ -1.28
LSM6-205ENST00000507449 SAMD7Q7Z3H4 446 aa7.08□□□□□ -1.28
LSM6-205ENST00000507449 RDH13Q8NBN7 331 aa7.08□□□□□ -1.28
LSM6-205ENST00000507449 SPTLC1O15269 473 aa7.07□□□□□ -1.28
LSM6-205ENST00000507449 NDUFV2P19404 249 aa7.07□□□□□ -1.28
LSM6-205ENST00000507449 GCGRP47871 477 aa7.07□□□□□ -1.28
LSM6-205ENST00000507449 RSBN1LQ6PCB5 846 aaPredicted RBP7.07□□□□□ -1.28
LSM6-205ENST00000507449 RIC3Q7Z5B4 369 aa7.07□□□□□ -1.28
LSM6-205ENST00000507449 WBP1LQ9NX94 342 aa7.07□□□□□ -1.28
LSM6-205ENST00000507449 DIXDC1Q155Q3 683 aa7.06□□□□□ -1.28
LSM6-205ENST00000507449 NUTM1Q86Y26 1132 aa7.06□□□□□ -1.28
LSM6-205ENST00000507449 KDM4AO75164 1064 aa7.05□□□□□ -1.28
LSM6-205ENST00000507449 INSM1Q01101 510 aaPredicted RBP7.05□□□□□ -1.28
LSM6-205ENST00000507449 TUSC1Q2TAM9 212 aa7.05□□□□□ -1.28
LSM6-205ENST00000507449 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
LSM6-205ENST00000507449 HLA-CQ95604 372 aa7.05□□□□□ -1.28
LSM6-205ENST00000507449 ZFRQ96KR1 1074 aaKnown RBP7.05□□□□□ -1.28
LSM6-205ENST00000507449 TSR3Q9UJK0 312 aaKnown RBP7.05□□□□□ -1.28
LSM6-205ENST00000507449 PCDHB15Q9Y5E8 787 aa7.05□□□□□ -1.28
LSM6-205ENST00000507449 HOXA2O43364 376 aa7.04□□□□□ -1.28
LSM6-205ENST00000507449 MCM6Q14566 821 aa7.04□□□□□ -1.28
LSM6-205ENST00000507449 QPCTQ16769 361 aa7.04□□□□□ -1.28
LSM6-205ENST00000507449 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 GJA5P36382 358 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 GGCXP38435 758 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 RFC5P40937 340 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 GUCA2AQ02747 115 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 FLIIQ13045 1269 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 PPP2R2DQ66LE6 453 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
LSM6-205ENST00000507449 PCDHGC3Q9UN70 934 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms