RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 ERBB3P21860 1342 aa10.58□□□□□ -0.71
NEDD4-206ENST00000507063 ABCA6Q8N139 1617 aa10.58□□□□□ -0.72
NEDD4-206ENST00000507063 SOX12O15370 315 aa10.58□□□□□ -0.72
NEDD4-206ENST00000507063 HNRNPMP52272 730 aaKnown RBP eCLIP10.57□□□□□ -0.72
NEDD4-206ENST00000507063 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
NEDD4-206ENST00000507063 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
NEDD4-206ENST00000507063 MLH3Q9UHC1 1453 aa10.56□□□□□ -0.72
NEDD4-206ENST00000507063 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
NEDD4-206ENST00000507063 RIOK3O14730 519 aaKnown RBP10.56□□□□□ -0.72
NEDD4-206ENST00000507063 CERKQ8TCT0 537 aa10.56□□□□□ -0.72
NEDD4-206ENST00000507063 ABCC1P33527 1531 aa10.56□□□□□ -0.72
NEDD4-206ENST00000507063 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
NEDD4-206ENST00000507063 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
NEDD4-206ENST00000507063 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
NEDD4-206ENST00000507063 ZSWIM6Q9HCJ5 1215 aa10.55□□□□□ -0.72
NEDD4-206ENST00000507063 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
NEDD4-206ENST00000507063 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
NEDD4-206ENST00000507063 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
NEDD4-206ENST00000507063 KIDINS220Q9ULH0 1771 aa10.54□□□□□ -0.72
NEDD4-206ENST00000507063 GPATCH8Q9UKJ3 1502 aaKnown RBP10.54□□□□□ -0.72
NEDD4-206ENST00000507063 PREX1Q8TCU6 1659 aa10.54□□□□□ -0.72
NEDD4-206ENST00000507063 ITSN2Q9NZM3 1697 aa10.54□□□□□ -0.72
NEDD4-206ENST00000507063 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
NEDD4-206ENST00000507063 SAMD9LQ8IVG5 1584 aa10.53□□□□□ -0.72
NEDD4-206ENST00000507063 MICALL2Q8IY33 904 aa10.53□□□□□ -0.72
NEDD4-206ENST00000507063 FYCO1Q9BQS8 1478 aa10.53□□□□□ -0.72
NEDD4-206ENST00000507063 C3P01024 1663 aa10.53□□□□□ -0.72
NEDD4-206ENST00000507063 ZNF644Q9H582 1327 aaPredicted RBP10.53□□□□□ -0.72
NEDD4-206ENST00000507063 REREQ9P2R6 1566 aa10.52□□□□□ -0.72
NEDD4-206ENST00000507063 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
NEDD4-206ENST00000507063 SYCP2Q9BX26 1530 aa10.51□□□□□ -0.73
NEDD4-206ENST00000507063 AGLP35573 1532 aa10.5□□□□□ -0.73
NEDD4-206ENST00000507063 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
NEDD4-206ENST00000507063 CFDP1Q9UEE9 299 aaPredicted RBP10.5□□□□□ -0.73
NEDD4-206ENST00000507063 SPAG9O60271 1321 aaKnown RBP10.5□□□□□ -0.73
NEDD4-206ENST00000507063 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
NEDD4-206ENST00000507063 SUPT6HQ7KZ85 1726 aaKnown RBP10.48□□□□□ -0.73
NEDD4-206ENST00000507063 ZMYM3Q14202 1370 aa10.48□□□□□ -0.73
NEDD4-206ENST00000507063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.47□□□□□ -0.73
NEDD4-206ENST00000507063 RGL2O15211 777 aa10.47□□□□□ -0.73
NEDD4-206ENST00000507063 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
NEDD4-206ENST00000507063 GGT6Q6P531 493 aa10.47□□□□□ -0.73
NEDD4-206ENST00000507063 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
NEDD4-206ENST00000507063 NCKAP5LQ9HCH0 1330 aa10.47□□□□□ -0.73
NEDD4-206ENST00000507063 CCNB3Q8WWL7 1395 aa10.47□□□□□ -0.73
NEDD4-206ENST00000507063 MTUS2Q5JR59 1369 aa10.46□□□□□ -0.74
NEDD4-206ENST00000507063 ATP7AQ04656 1500 aa10.45□□□□□ -0.74
NEDD4-206ENST00000507063 A2MP01023 1474 aa10.44□□□□□ -0.74
NEDD4-206ENST00000507063 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
NEDD4-206ENST00000507063 LOC105371045A0A1W2PR82 267 aa10.44□□□□□ -0.74
NEDD4-206ENST00000507063 NLRP6P59044 892 aa10.44□□□□□ -0.74
NEDD4-206ENST00000507063 SETD1BQ9UPS6 1966 aaKnown RBP10.44□□□□□ -0.74
NEDD4-206ENST00000507063 CLTCQ00610 1675 aaKnown RBP10.44□□□□□ -0.74
NEDD4-206ENST00000507063 TIAM1Q13009 1591 aa10.43□□□□□ -0.74
NEDD4-206ENST00000507063 INO80Q9ULG1 1556 aaPredicted RBP10.43□□□□□ -0.74
NEDD4-206ENST00000507063 MBD5Q9P267 1494 aa10.43□□□□□ -0.74
NEDD4-206ENST00000507063 PTPRTO14522 1441 aa10.43□□□□□ -0.74
NEDD4-206ENST00000507063 NCOA1Q15788 1441 aa10.43□□□□□ -0.74
NEDD4-206ENST00000507063 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
NEDD4-206ENST00000507063 CAMSAP1Q5T5Y3 1602 aa10.43□□□□□ -0.74
NEDD4-206ENST00000507063 PLXNC1O60486 1568 aa10.43□□□□□ -0.74
NEDD4-206ENST00000507063 CNTLNQ9NXG0 1405 aa10.42□□□□□ -0.74
NEDD4-206ENST00000507063 PTGER2P43116 358 aa10.42□□□□□ -0.74
NEDD4-206ENST00000507063 ZNF687Q8N1G0 1237 aa10.42□□□□□ -0.74
NEDD4-206ENST00000507063 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
NEDD4-206ENST00000507063 LTBP4Q8N2S1 1624 aa10.42□□□□□ -0.74
NEDD4-206ENST00000507063 PTPRKQ15262 1439 aa10.41□□□□□ -0.74
NEDD4-206ENST00000507063 CEP162Q5TB80 1403 aa10.41□□□□□ -0.74
NEDD4-206ENST00000507063 FBXO31Q5XUX0 539 aaPredicted RBP10.41□□□□□ -0.74
NEDD4-206ENST00000507063 ILDR2Q71H61 639 aa10.41□□□□□ -0.74
NEDD4-206ENST00000507063 NPATQ14207 1427 aa10.41□□□□□ -0.74
NEDD4-206ENST00000507063 ZNF335Q9H4Z2 1342 aaPredicted RBP10.4□□□□□ -0.74
NEDD4-206ENST00000507063 TMEM92Q6UXU6 159 aa10.4□□□□□ -0.74
NEDD4-206ENST00000507063 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.74
NEDD4-206ENST00000507063 PLEKHH2Q8IVE3 1493 aa10.4□□□□□ -0.74
NEDD4-206ENST00000507063 MROH2AA6NES4 1674 aa10.4□□□□□ -0.74
NEDD4-206ENST00000507063 GPR153Q6NV75 609 aa10.39□□□□□ -0.75
NEDD4-206ENST00000507063 KIF3BO15066 747 aa10.38□□□□□ -0.75
NEDD4-206ENST00000507063 DHX29Q7Z478 1369 aaKnown RBP10.38□□□□□ -0.75
NEDD4-206ENST00000507063 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
NEDD4-206ENST00000507063 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
NEDD4-206ENST00000507063 MYO3AQ8NEV4 1616 aa10.37□□□□□ -0.75
NEDD4-206ENST00000507063 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
NEDD4-206ENST00000507063 DISP3Q9P2K9 1392 aa10.37□□□□□ -0.75
NEDD4-206ENST00000507063 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
NEDD4-206ENST00000507063 CAMSAP2Q08AD1 1489 aa10.36□□□□□ -0.75
NEDD4-206ENST00000507063 CEP170BQ9Y4F5 1589 aaPredicted RBP10.35□□□□□ -0.75
NEDD4-206ENST00000507063 RTEL1-TNFRSF6BF6WH68 1400 aa10.35□□□□□ -0.75
NEDD4-206ENST00000507063 BCL11BQ9C0K0 894 aaPredicted RBP10.35□□□□□ -0.75
NEDD4-206ENST00000507063 STK24Q9Y6E0 443 aa10.35□□□□□ -0.75
NEDD4-206ENST00000507063 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
NEDD4-206ENST00000507063 ZNF142P52746 1687 aaPredicted RBP10.34□□□□□ -0.75
NEDD4-206ENST00000507063 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
NEDD4-206ENST00000507063 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
NEDD4-206ENST00000507063 UBAP1LF5GYI3 381 aa10.33□□□□□ -0.76
NEDD4-206ENST00000507063 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
NEDD4-206ENST00000507063 CCDC141Q6ZP82 1450 aa10.33□□□□□ -0.76
NEDD4-206ENST00000507063 A2ML1A8K2U0 1454 aa10.31□□□□□ -0.76
NEDD4-206ENST00000507063 PLA2R1Q13018 1463 aa10.31□□□□□ -0.76
NEDD4-206ENST00000507063 LRRC9Q6ZRR7 1453 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms