RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 UNC13AQ9UPW8 1703 aa8.58□□□□□ -1.04
CLDND1-213ENST00000506927 ABCC8Q09428 1581 aa8.58□□□□□ -1.04
CLDND1-213ENST00000506927 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
CLDND1-213ENST00000506927 LMOD2Q6P5Q4 547 aa8.58□□□□□ -1.04
CLDND1-213ENST00000506927 LAPTM4BQ86VI4 370 aa8.58□□□□□ -1.04
CLDND1-213ENST00000506927 TATDN2Q93075 761 aa8.58□□□□□ -1.04
CLDND1-213ENST00000506927 KCTD12Q96CX2 325 aaKnown RBP8.58□□□□□ -1.04
CLDND1-213ENST00000506927 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
CLDND1-213ENST00000506927 NBPF26B4DH59 902 aa8.57□□□□□ -1.04
CLDND1-213ENST00000506927 FECHP22830 423 aa8.57□□□□□ -1.04
CLDND1-213ENST00000506927 NUDT18Q6ZVK8 323 aa8.57□□□□□ -1.04
CLDND1-213ENST00000506927 GNPATO15228 680 aa8.56□□□□□ -1.04
CLDND1-213ENST00000506927 FAM98CQ17RN3 349 aaKnown RBP8.56□□□□□ -1.04
CLDND1-213ENST00000506927 ZFRQ96KR1 1074 aaKnown RBP8.56□□□□□ -1.04
CLDND1-213ENST00000506927 SOGA1O94964 1423 aa8.55□□□□□ -1.04
CLDND1-213ENST00000506927 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
CLDND1-213ENST00000506927 WNT2BQ93097 391 aa8.55□□□□□ -1.04
CLDND1-213ENST00000506927 BCANQ96GW7 911 aa8.55□□□□□ -1.04
CLDND1-213ENST00000506927 CLIP1P30622 1438 aa8.54□□□□□ -1.04
CLDND1-213ENST00000506927 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
CLDND1-213ENST00000506927 EYA1Q99502 592 aa8.53□□□□□ -1.04
CLDND1-213ENST00000506927 ADGRG1Q9Y653 693 aa8.53□□□□□ -1.04
CLDND1-213ENST00000506927 THSD4Q6ZMP0 1018 aa8.52□□□□□ -1.05
CLDND1-213ENST00000506927 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
CLDND1-213ENST00000506927 ERICH3Q5RHP9 1530 aa8.51□□□□□ -1.05
CLDND1-213ENST00000506927 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
CLDND1-213ENST00000506927 BCAMP50895 628 aa8.5□□□□□ -1.05
CLDND1-213ENST00000506927 PTPN5P54829 565 aa8.5□□□□□ -1.05
CLDND1-213ENST00000506927 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
CLDND1-213ENST00000506927 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
CLDND1-213ENST00000506927 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
CLDND1-213ENST00000506927 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
CLDND1-213ENST00000506927 HCSTQ9UBK5 93 aa8.49□□□□□ -1.05
CLDND1-213ENST00000506927 ZC3H15Q8WU90 426 aaKnown RBP8.48□□□□□ -1.05
CLDND1-213ENST00000506927 LRCH3Q96II8 777 aa8.48□□□□□ -1.05
CLDND1-213ENST00000506927 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.48□□□□□ -1.05
CLDND1-213ENST00000506927 ATAD2BQ9ULI0 1458 aa8.48□□□□□ -1.05
CLDND1-213ENST00000506927 OATP04181 439 aa8.47□□□□□ -1.05
CLDND1-213ENST00000506927 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
CLDND1-213ENST00000506927 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
CLDND1-213ENST00000506927 RCCD1A6NED2 376 aa8.46□□□□□ -1.06
CLDND1-213ENST00000506927 HDGFP51858 240 aaKnown RBP8.46□□□□□ -1.06
CLDND1-213ENST00000506927 MAP2K5Q13163 448 aa8.46□□□□□ -1.06
CLDND1-213ENST00000506927 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
CLDND1-213ENST00000506927 METTL3Q86U44 580 aaKnown RBP8.46□□□□□ -1.06
CLDND1-213ENST00000506927 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.06
CLDND1-213ENST00000506927 BIVM-ERCC5R4GMW8 1640 aa8.45□□□□□ -1.06
CLDND1-213ENST00000506927 ZMYND10O75800 440 aa8.45□□□□□ -1.06
CLDND1-213ENST00000506927 DNAJB2P25686 324 aa8.45□□□□□ -1.06
CLDND1-213ENST00000506927 SYNJ1O43426 1573 aa8.44□□□□□ -1.06
CLDND1-213ENST00000506927 IRF6O14896 467 aa8.44□□□□□ -1.06
CLDND1-213ENST00000506927 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
CLDND1-213ENST00000506927 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
CLDND1-213ENST00000506927 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
CLDND1-213ENST00000506927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.43□□□□□ -1.06
CLDND1-213ENST00000506927 RNF40O75150 1001 aa8.43□□□□□ -1.06
CLDND1-213ENST00000506927 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
CLDND1-213ENST00000506927 TSR3Q9UJK0 312 aaKnown RBP8.43□□□□□ -1.06
CLDND1-213ENST00000506927 MINK1Q8N4C8 1332 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-213ENST00000506927 KIF27Q86VH2 1401 aa8.43□□□□□ -1.06
CLDND1-213ENST00000506927 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
CLDND1-213ENST00000506927 NLRP7Q8WX94 980 aa8.42□□□□□ -1.06
CLDND1-213ENST00000506927 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
CLDND1-213ENST00000506927 HMGXB3Q12766 1538 aa8.41□□□□□ -1.06
CLDND1-213ENST00000506927 PPP4CP60510 307 aa8.41□□□□□ -1.06
CLDND1-213ENST00000506927 KRI1Q8N9T8 703 aaKnown RBP8.41□□□□□ -1.06
CLDND1-213ENST00000506927 CCDC102AQ96A19 550 aa8.41□□□□□ -1.06
CLDND1-213ENST00000506927 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
CLDND1-213ENST00000506927 SLF2Q8IX21 1173 aa8.4□□□□□ -1.06
CLDND1-213ENST00000506927 MAP3K1Q13233 1512 aa8.39□□□□□ -1.07
CLDND1-213ENST00000506927 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
CLDND1-213ENST00000506927 TTBK1Q5TCY1 1321 aaPredicted RBP8.38□□□□□ -1.07
CLDND1-213ENST00000506927 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
CLDND1-213ENST00000506927 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
CLDND1-213ENST00000506927 RRBP1Q9P2E9 1410 aaKnown RBP8.37□□□□□ -1.07
CLDND1-213ENST00000506927 SLC4A3P48751 1232 aa8.37□□□□□ -1.07
CLDND1-213ENST00000506927 NYAP1Q6ZVC0 841 aa8.37□□□□□ -1.07
CLDND1-213ENST00000506927 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
CLDND1-213ENST00000506927 CUX2O14529 1486 aa8.37□□□□□ -1.07
CLDND1-213ENST00000506927 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
CLDND1-213ENST00000506927 SLC10A3P09131 477 aa8.34□□□□□ -1.07
CLDND1-213ENST00000506927 APLP1P51693 650 aa8.34□□□□□ -1.07
CLDND1-213ENST00000506927 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
CLDND1-213ENST00000506927 CCNB3Q8WWL7 1395 aa8.34□□□□□ -1.07
CLDND1-213ENST00000506927 FHAD1B1AJZ9 1412 aa8.33□□□□□ -1.08
CLDND1-213ENST00000506927 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-213ENST00000506927 PRDM2Q13029 1718 aa8.33□□□□□ -1.08
CLDND1-213ENST00000506927 DDX11L8A8MPP1 907 aa8.32□□□□□ -1.08
CLDND1-213ENST00000506927 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
CLDND1-213ENST00000506927 DHX57Q6P158 1386 aaKnown RBP8.32□□□□□ -1.08
CLDND1-213ENST00000506927 AK7Q96M32 723 aa8.31□□□□□ -1.08
CLDND1-213ENST00000506927 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
CLDND1-213ENST00000506927 CFTRP13569 1480 aa8.31□□□□□ -1.08
CLDND1-213ENST00000506927 CFHP08603 1231 aa8.3□□□□□ -1.08
CLDND1-213ENST00000506927 RDH13Q8NBN7 331 aa8.3□□□□□ -1.08
CLDND1-213ENST00000506927 TRIM66O15016 1216 aa8.29□□□□□ -1.08
CLDND1-213ENST00000506927 CLCN1P35523 988 aa8.29□□□□□ -1.08
CLDND1-213ENST00000506927 RSPH4AQ5TD94 716 aa8.29□□□□□ -1.08
CLDND1-213ENST00000506927 SULF1Q8IWU6 871 aa8.29□□□□□ -1.08
CLDND1-213ENST00000506927 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms