RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
AFP-203ENST00000506820 KMT5BQ4FZB7 885 aa8.36□□□□□ -1.07
AFP-203ENST00000506820 FAM161AQ3B820 660 aa8.35□□□□□ -1.07
AFP-203ENST00000506820 PXYLP1Q8TE99 480 aa8.35□□□□□ -1.07
AFP-203ENST00000506820 MTRQ99707 1265 aa8.34□□□□□ -1.07
AFP-203ENST00000506820 APLP1P51693 650 aa8.33□□□□□ -1.08
AFP-203ENST00000506820 METTL3Q86U44 580 aaKnown RBP8.33□□□□□ -1.08
AFP-203ENST00000506820 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
AFP-203ENST00000506820 PCDHB3Q9Y5E6 796 aa8.32□□□□□ -1.08
AFP-203ENST00000506820 GGCXP38435 758 aa8.31□□□□□ -1.08
AFP-203ENST00000506820 FECHP22830 423 aa8.3□□□□□ -1.08
AFP-203ENST00000506820 SULF1Q8IWU6 871 aa8.3□□□□□ -1.08
AFP-203ENST00000506820 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
AFP-203ENST00000506820 CFHP08603 1231 aa8.29□□□□□ -1.08
AFP-203ENST00000506820 COPS2P61201 443 aa8.29□□□□□ -1.08
AFP-203ENST00000506820 GPR37O15354 613 aa8.28□□□□□ -1.08
AFP-203ENST00000506820 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
AFP-203ENST00000506820 RDH13Q8NBN7 331 aa8.28□□□□□ -1.08
AFP-203ENST00000506820 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
AFP-203ENST00000506820 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.09
AFP-203ENST00000506820 ZPR1O75312 459 aa8.26□□□□□ -1.09
AFP-203ENST00000506820 NR1I2O75469 434 aa8.26□□□□□ -1.09
AFP-203ENST00000506820 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
AFP-203ENST00000506820 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.25□□□□□ -1.095e-6■■■■■ 45.5
AFP-203ENST00000506820 KRI1Q8N9T8 703 aaKnown RBP8.25□□□□□ -1.09
AFP-203ENST00000506820 ZNF516Q92618 1163 aa8.25□□□□□ -1.09
AFP-203ENST00000506820 IRF6O14896 467 aa8.24□□□□□ -1.09
AFP-203ENST00000506820 SLC10A3P09131 477 aa8.23□□□□□ -1.09
AFP-203ENST00000506820 GRIPAP1Q4V328 841 aa8.23□□□□□ -1.09
AFP-203ENST00000506820 PPP1R18Q6NYC8 613 aa8.23□□□□□ -1.09
AFP-203ENST00000506820 LMOD2Q6P5Q4 547 aa8.23□□□□□ -1.09
AFP-203ENST00000506820 BLOC1S3Q6QNY0 202 aa8.23□□□□□ -1.09
AFP-203ENST00000506820 TMUB1Q9BVT8 246 aa8.23□□□□□ -1.09
AFP-203ENST00000506820 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.23□□□□□ -1.09
AFP-203ENST00000506820 IRX2Q9BZI1 471 aaPredicted RBP8.22□□□□□ -1.09
AFP-203ENST00000506820 NKX2-3Q8TAU0 364 aa8.2□□□□□ -1.1
AFP-203ENST00000506820 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
AFP-203ENST00000506820 GCGRP47871 477 aa8.18□□□□□ -1.1
AFP-203ENST00000506820 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
AFP-203ENST00000506820 CLCN1P35523 988 aa8.17□□□□□ -1.1
AFP-203ENST00000506820 SCUBE3Q8IX30 993 aa8.17□□□□□ -1.1
AFP-203ENST00000506820 CCDC102AQ96A19 550 aa8.17□□□□□ -1.1
AFP-203ENST00000506820 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
AFP-203ENST00000506820 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
AFP-203ENST00000506820 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
AFP-203ENST00000506820 MDM2Q00987 491 aaPredicted RBP8.16□□□□□ -1.1
AFP-203ENST00000506820 ADH1BP00325 375 aa8.15□□□□□ -1.1
AFP-203ENST00000506820 LAPTM4AQ15012 233 aa8.15□□□□□ -1.1
AFP-203ENST00000506820 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
AFP-203ENST00000506820 SPSB2Q99619 263 aa8.15□□□□□ -1.1
AFP-203ENST00000506820 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
AFP-203ENST00000506820 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
AFP-203ENST00000506820 FUT2Q10981 343 aa8.14□□□□□ -1.11
AFP-203ENST00000506820 SLC6A16Q9GZN6 736 aa8.14□□□□□ -1.11
AFP-203ENST00000506820 Q3C1V9 767 aa8.13□□□□□ -1.11
AFP-203ENST00000506820 BARGINQ6ZT62 677 aa8.13□□□□□ -1.11
AFP-203ENST00000506820 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
AFP-203ENST00000506820 TLL1O43897 1013 aa8.12□□□□□ -1.11
AFP-203ENST00000506820 ZMYND10O75800 440 aa8.12□□□□□ -1.11
AFP-203ENST00000506820 CD46P15529 392 aa8.12□□□□□ -1.11
AFP-203ENST00000506820 USP46P62068 366 aa8.12□□□□□ -1.11
AFP-203ENST00000506820 MORN1Q5T089 497 aa8.12□□□□□ -1.11
AFP-203ENST00000506820 ANKLE1Q8NAG6 615 aa8.12□□□□□ -1.11
AFP-203ENST00000506820 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
AFP-203ENST00000506820 KDM4AO75164 1064 aa8.11□□□□□ -1.11
AFP-203ENST00000506820 S1PR4O95977 384 aa8.11□□□□□ -1.11
AFP-203ENST00000506820 SALL2Q9Y467 1007 aaPredicted RBP8.11□□□□□ -1.11
AFP-203ENST00000506820 SLC19A1P41440 591 aa8.1□□□□□ -1.11
AFP-203ENST00000506820 NUTM1Q86Y26 1132 aa8.1□□□□□ -1.11
AFP-203ENST00000506820 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.11
AFP-203ENST00000506820 SLC27A5Q9Y2P5 690 aa8.09□□□□□ -1.11
AFP-203ENST00000506820 GFRA3O60609 400 aa8.08□□□□□ -1.12
AFP-203ENST00000506820 SLC24A1O60721 1099 aa8.07□□□□□ -1.12
AFP-203ENST00000506820 Q6ZNB5 142 aa8.07□□□□□ -1.12
AFP-203ENST00000506820 FAM217BQ9NTX9 383 aaPredicted RBP8.07□□□□□ -1.12
AFP-203ENST00000506820 SSTR3P32745 418 aaPredicted RBP8.06□□□□□ -1.12
AFP-203ENST00000506820 BCANQ96GW7 911 aa8.06□□□□□ -1.12
AFP-203ENST00000506820 AK7Q96M32 723 aa8.06□□□□□ -1.12
AFP-203ENST00000506820 PPEF1O14829 653 aaPredicted RBP8.05□□□□□ -1.12
AFP-203ENST00000506820 BRICD5Q6PL45 260 aa8.05□□□□□ -1.12
AFP-203ENST00000506820 THAP11Q96EK4 314 aa8.05□□□□□ -1.12
AFP-203ENST00000506820 NRG2O14511 850 aaPredicted RBP8.04□□□□□ -1.12
AFP-203ENST00000506820 ZBTB24O43167 697 aaPredicted RBP8.04□□□□□ -1.12
AFP-203ENST00000506820 AMHR2Q16671 573 aa8.04□□□□□ -1.12
AFP-203ENST00000506820 PDZRN3Q9UPQ7 1066 aa8.04□□□□□ -1.12
AFP-203ENST00000506820 CD2BP2O95400 341 aaKnown RBP8.03□□□□□ -1.12
AFP-203ENST00000506820 DIXDC1Q155Q3 683 aa8.03□□□□□ -1.12
AFP-203ENST00000506820 ZNF598Q86UK7 904 aaKnown RBP8.03□□□□□ -1.12
AFP-203ENST00000506820 MSS51Q4VC12 460 aa8.02□□□□□ -1.13
AFP-203ENST00000506820 SPRYD7Q5W111 196 aa8.02□□□□□ -1.13
AFP-203ENST00000506820 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
AFP-203ENST00000506820 HOXA2O43364 376 aa8.01□□□□□ -1.13
AFP-203ENST00000506820 FAM160A2Q8N612 972 aaPredicted RBP8.01□□□□□ -1.13
AFP-203ENST00000506820 RPIAP49247 311 aa8□□□□□ -1.13
AFP-203ENST00000506820 ZNF697Q5TEC3 545 aa8□□□□□ -1.13
AFP-203ENST00000506820 GIGYF2Q6Y7W6 1299 aaKnown RBP8□□□□□ -1.13
AFP-203ENST00000506820 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
AFP-203ENST00000506820 FCF1Q9Y324 198 aaKnown RBP8□□□□□ -1.13
AFP-203ENST00000506820 TRIM66O15016 1216 aa7.99□□□□□ -1.13
AFP-203ENST00000506820 LIAT1Q6ZQX7 453 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms