RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 BRD4O60885 1362 aaPredicted RBP12.32□□□□□ -0.44
PHF3-208ENST00000506783 KANK1Q14678 1352 aa12.32□□□□□ -0.44
PHF3-208ENST00000506783 TCP11L2Q8N4U5 519 aa12.31□□□□□ -0.44
PHF3-208ENST00000506783 C1orf115Q9H7X2 142 aa12.31□□□□□ -0.44
PHF3-208ENST00000506783 SMC4Q9NTJ3 1288 aa12.31□□□□□ -0.44
PHF3-208ENST00000506783 GPATCH8Q9UKJ3 1502 aaKnown RBP12.31□□□□□ -0.44
PHF3-208ENST00000506783 HECW1Q76N89 1606 aa12.31□□□□□ -0.44
PHF3-208ENST00000506783 HMOX1P09601 288 aa12.31□□□□□ -0.44
PHF3-208ENST00000506783 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
PHF3-208ENST00000506783 TESK2Q96S53 571 aa12.31□□□□□ -0.44
PHF3-208ENST00000506783 CFAP43Q8NDM7 1665 aa12.3□□□□□ -0.44
PHF3-208ENST00000506783 THUMPD2Q9BTF0 503 aaKnown RBP12.3□□□□□ -0.44
PHF3-208ENST00000506783 PDE3BQ13370 1112 aa12.29□□□□□ -0.44
PHF3-208ENST00000506783 DUSP27Q5VZP5 1158 aa12.29□□□□□ -0.44
PHF3-208ENST00000506783 ADGRF5Q8IZF2 1346 aa12.29□□□□□ -0.44
PHF3-208ENST00000506783 NCLP19338 710 aaKnown RBP12.29□□□□□ -0.44
PHF3-208ENST00000506783 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
PHF3-208ENST00000506783 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
PHF3-208ENST00000506783 ARID3AQ99856 593 aa12.29□□□□□ -0.44
PHF3-208ENST00000506783 CDCA8Q53HL2 280 aa12.29□□□□□ -0.44
PHF3-208ENST00000506783 PZPP20742 1482 aa12.29□□□□□ -0.44
PHF3-208ENST00000506783 PLEKHH2Q8IVE3 1493 aa12.28□□□□□ -0.44
PHF3-208ENST00000506783 GSE1Q14687 1217 aa12.28□□□□□ -0.44
PHF3-208ENST00000506783 PLEKHH1Q9ULM0 1364 aa12.28□□□□□ -0.44
PHF3-208ENST00000506783 FOXD4L6Q3SYB3 417 aaPredicted RBP12.27□□□□□ -0.44
PHF3-208ENST00000506783 FOXD4L3Q6VB84 417 aaPredicted RBP12.27□□□□□ -0.44
PHF3-208ENST00000506783 TEX14Q8IWB6 1497 aa12.27□□□□□ -0.44
PHF3-208ENST00000506783 CENPQQ7L2Z9 268 aaPredicted RBP12.27□□□□□ -0.45
PHF3-208ENST00000506783 CTTNBP2Q8WZ74 1663 aa12.27□□□□□ -0.45
PHF3-208ENST00000506783 CD109Q6YHK3 1445 aa12.27□□□□□ -0.45
PHF3-208ENST00000506783 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
PHF3-208ENST00000506783 C14orf37Q86TY3 774 aa12.27□□□□□ -0.45
PHF3-208ENST00000506783 ERCC6L2Q5T890 1561 aa12.27□□□□□ -0.45
PHF3-208ENST00000506783 MAPK8IP3Q9UPT6 1336 aa12.27□□□□□ -0.45
PHF3-208ENST00000506783 LNPKQ9C0E8 428 aa12.26□□□□□ -0.45
PHF3-208ENST00000506783 NOL8Q76FK4 1167 aaKnown RBP12.26□□□□□ -0.45
PHF3-208ENST00000506783 CFAP53Q96M91 514 aa12.26□□□□□ -0.45
PHF3-208ENST00000506783 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
PHF3-208ENST00000506783 KDM5BQ9UGL1 1544 aa12.25□□□□□ -0.45
PHF3-208ENST00000506783 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
PHF3-208ENST00000506783 RLBP1P12271 317 aa12.24□□□□□ -0.45
PHF3-208ENST00000506783 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
PHF3-208ENST00000506783 ASXL2Q76L83 1435 aa12.24□□□□□ -0.45
PHF3-208ENST00000506783 ERBINQ96RT1 1412 aa12.24□□□□□ -0.45
PHF3-208ENST00000506783 CARD14Q9BXL6 1004 aa12.24□□□□□ -0.45
PHF3-208ENST00000506783 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
PHF3-208ENST00000506783 BECN1Q14457 450 aa12.23□□□□□ -0.45
PHF3-208ENST00000506783 EXOSC9Q06265 439 aaKnown RBP12.22□□□□□ -0.45
PHF3-208ENST00000506783 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
PHF3-208ENST00000506783 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
PHF3-208ENST00000506783 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
PHF3-208ENST00000506783 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
PHF3-208ENST00000506783 CEBPAP49715 358 aaPredicted RBP12.21□□□□□ -0.45
PHF3-208ENST00000506783 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
PHF3-208ENST00000506783 E9PSI1 815 aa12.21□□□□□ -0.46
PHF3-208ENST00000506783 KIF14Q15058 1648 aa12.2□□□□□ -0.46
PHF3-208ENST00000506783 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
PHF3-208ENST00000506783 TAOK2Q9UL54 1235 aa12.2□□□□□ -0.46
PHF3-208ENST00000506783 RIPK4P57078 832 aa12.19□□□□□ -0.46
PHF3-208ENST00000506783 ANKRD45Q5TZF3 282 aa12.19□□□□□ -0.46
PHF3-208ENST00000506783 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
PHF3-208ENST00000506783 MS4A1P11836 297 aa12.19□□□□□ -0.46
PHF3-208ENST00000506783 NAP1L5Q96NT1 182 aaPredicted RBP12.19□□□□□ -0.46
PHF3-208ENST00000506783 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
PHF3-208ENST00000506783 C8orf34Q49A92 452 aa12.18□□□□□ -0.46
PHF3-208ENST00000506783 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
PHF3-208ENST00000506783 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
PHF3-208ENST00000506783 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
PHF3-208ENST00000506783 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
PHF3-208ENST00000506783 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
PHF3-208ENST00000506783 CHD1O14646 1710 aa12.17□□□□□ -0.46
PHF3-208ENST00000506783 DTNBO60941 627 aa12.16□□□□□ -0.46
PHF3-208ENST00000506783 FANCAO15360 1455 aa12.16□□□□□ -0.46
PHF3-208ENST00000506783 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
PHF3-208ENST00000506783 NUTM2GQ5VZR2 741 aa12.15□□□□□ -0.46
PHF3-208ENST00000506783 LTV1Q96GA3 475 aaPredicted RBP12.15□□□□□ -0.46
PHF3-208ENST00000506783 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
PHF3-208ENST00000506783 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
PHF3-208ENST00000506783 MPNDQ8N594 471 aa12.15□□□□□ -0.46
PHF3-208ENST00000506783 RWDD1Q9H446 243 aaPredicted RBP12.15□□□□□ -0.46
PHF3-208ENST00000506783 NOB1Q9ULX3 412 aaKnown RBP12.15□□□□□ -0.46
PHF3-208ENST00000506783 WAPLQ7Z5K2 1190 aa12.15□□□□□ -0.46
PHF3-208ENST00000506783 MIS18AQ9NYP9 233 aa12.14□□□□□ -0.47
PHF3-208ENST00000506783 PARD3Q8TEW0 1356 aa12.14□□□□□ -0.47
PHF3-208ENST00000506783 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
PHF3-208ENST00000506783 RNF123Q5XPI4 1314 aa12.14□□□□□ -0.47
PHF3-208ENST00000506783 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
PHF3-208ENST00000506783 NCKAP5LQ9HCH0 1330 aa12.13□□□□□ -0.47
PHF3-208ENST00000506783 RRS1Q15050 365 aaKnown RBP12.13□□□□□ -0.47
PHF3-208ENST00000506783 PRAM1Q96QH2 718 aa12.13□□□□□ -0.47
PHF3-208ENST00000506783 CABP1Q9NZU7 370 aa12.13□□□□□ -0.47
PHF3-208ENST00000506783 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
PHF3-208ENST00000506783 RARSP54136 660 aaKnown RBP12.12□□□□□ -0.47
PHF3-208ENST00000506783 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
PHF3-208ENST00000506783 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
PHF3-208ENST00000506783 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
PHF3-208ENST00000506783 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
PHF3-208ENST00000506783 SSH1Q8WYL5 1049 aa12.12□□□□□ -0.47
PHF3-208ENST00000506783 HSCBQ8IWL3 235 aa12.11□□□□□ -0.47
PHF3-208ENST00000506783 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms