RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 CLEC11AQ9Y240 323 aa3.35□□□□□ -1.87
NEDD4-205ENST00000506154 IQGAP1P46940 1657 aa3.35□□□□□ -1.87
NEDD4-205ENST00000506154 MARF1Q9Y4F3 1742 aaKnown RBP3.35□□□□□ -1.87
NEDD4-205ENST00000506154 APBB1O00213 710 aa3.35□□□□□ -1.87
NEDD4-205ENST00000506154 NKX1-1Q15270 411 aaPredicted RBP3.35□□□□□ -1.87
NEDD4-205ENST00000506154 PROM2Q8N271 834 aa3.35□□□□□ -1.87
NEDD4-205ENST00000506154 SPOCK2Q92563 424 aa3.35□□□□□ -1.87
NEDD4-205ENST00000506154 SYCP2Q9BX26 1530 aa3.35□□□□□ -1.87
NEDD4-205ENST00000506154 CLTCQ00610 1675 aaKnown RBP3.35□□□□□ -1.87
NEDD4-205ENST00000506154 ADGRB1O14514 1584 aa3.35□□□□□ -1.87
NEDD4-205ENST00000506154 PPLO60437 1756 aa3.34□□□□□ -1.87
NEDD4-205ENST00000506154 ALKQ9UM73 1620 aa3.34□□□□□ -1.87
NEDD4-205ENST00000506154 LMOD2Q6P5Q4 547 aa3.34□□□□□ -1.87
NEDD4-205ENST00000506154 RNF25Q96BH1 459 aaPredicted RBP3.34□□□□□ -1.87
NEDD4-205ENST00000506154 SEMA3EO15041 775 aa3.34□□□□□ -1.87
NEDD4-205ENST00000506154 CRYBG1Q9Y4K1 1723 aa3.34□□□□□ -1.88
NEDD4-205ENST00000506154 NWD1Q149M9 1564 aa3.34□□□□□ -1.88
NEDD4-205ENST00000506154 ERBINQ96RT1 1412 aa3.34□□□□□ -1.88
NEDD4-205ENST00000506154 NOS1P29475 1434 aa3.34□□□□□ -1.88
NEDD4-205ENST00000506154 DAPK1P53355 1430 aa3.34□□□□□ -1.88
NEDD4-205ENST00000506154 C11orf95C9JLR9 678 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-205ENST00000506154 RSPH6AQ9H0K4 717 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 NCOA1Q15788 1441 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 TOPAZ1Q8N9V7 1692 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 ATP7AQ04656 1500 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 ASXL1Q8IXJ9 1541 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 FGD1P98174 961 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 UHRF1BP1Q6BDS2 1440 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 MYOM1P52179 1685 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 SALL2Q9Y467 1007 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-205ENST00000506154 ADGRB2O60241 1585 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 CEP170BQ9Y4F5 1589 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-205ENST00000506154 ASXL2Q76L83 1435 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 CLUAP1Q96AJ1 413 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 WDR70Q9NW82 654 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 ARHGAP23Q9P227 1491 aa3.33□□□□□ -1.88
NEDD4-205ENST00000506154 PREX1Q8TCU6 1659 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 ANKRD26Q9UPS8 1709 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 SPATA31E1Q6ZUB1 1445 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 KRI1Q8N9T8 703 aaKnown RBP3.32□□□□□ -1.88
NEDD4-205ENST00000506154 XRN1Q8IZH2 1706 aaKnown RBP3.32□□□□□ -1.88
NEDD4-205ENST00000506154 C1orf115Q9H7X2 142 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 TRPM1Q7Z4N2 1603 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 ZNF692Q9BU19 519 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-205ENST00000506154 RPRD2Q5VT52 1461 aaKnown RBP3.32□□□□□ -1.88
NEDD4-205ENST00000506154 RSPH4AQ5TD94 716 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 KCNV2Q8TDN2 545 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 NRKQ7Z2Y5 1582 aa3.32□□□□□ -1.88
NEDD4-205ENST00000506154 CHRM1P11229 460 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-205ENST00000506154 AAMPQ13685 434 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 NLRP7Q8WX94 980 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 SETBP1Q9Y6X0 1596 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 RBM26Q5T8P6 1007 aaKnown RBP3.31□□□□□ -1.88
NEDD4-205ENST00000506154 UBR1Q8IWV7 1749 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 CLTCL1P53675 1640 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 POLR3GLQ9BT43 218 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 SLIT1O75093 1534 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 PLEKHH2Q8IVE3 1493 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 BCL11BQ9C0K0 894 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-205ENST00000506154 LRRC7Q96NW7 1537 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 FANCAO15360 1455 aa3.31□□□□□ -1.88
NEDD4-205ENST00000506154 USP32Q8NFA0 1604 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 NEXMIFQ5QGS0 1516 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 PHRF1Q9P1Y6 1649 aaKnown RBP3.3□□□□□ -1.88
NEDD4-205ENST00000506154 FANCIQ9NVI1 1328 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 TSPYL2Q9H2G4 693 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-205ENST00000506154 MYOM2P54296 1465 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 ERVK-7P63135 1459 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 CCDC141Q6ZP82 1450 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 MST1RQ04912 1400 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 ZNF777Q9ULD5 760 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-205ENST00000506154 CARMIL2Q6F5E8 1435 aa3.3□□□□□ -1.88
NEDD4-205ENST00000506154 PDIA4P13667 645 aaKnown RBP3.3□□□□□ -1.88
NEDD4-205ENST00000506154 XIRP1Q702N8 1843 aaKnown RBP3.29□□□□□ -1.88
NEDD4-205ENST00000506154 LMTK3Q96Q04 1460 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 C3P01024 1663 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 ZFYVE9O95405 1425 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 GPRASP1Q5JY77 1395 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 CAMTA1Q9Y6Y1 1673 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-205ENST00000506154 ZFP91Q96JP5 570 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-205ENST00000506154 USP35Q9P2H5 1018 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 TRAPPC8Q9Y2L5 1435 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 SHPRHQ149N8 1683 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 KANK4Q5T7N3 995 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-205ENST00000506154 FAM117AQ9C073 453 aa3.29□□□□□ -1.88
NEDD4-205ENST00000506154 LOC105371045A0A1W2PR82 267 aa3.28□□□□□ -1.88
NEDD4-205ENST00000506154 IGSF3O75054 1194 aa3.28□□□□□ -1.88
NEDD4-205ENST00000506154 CCDC82Q8N4S0 544 aa3.28□□□□□ -1.88
NEDD4-205ENST00000506154 WASHC2CQ9Y4E1 1318 aa3.28□□□□□ -1.89
NEDD4-205ENST00000506154 JPH4Q96JJ6 628 aa3.27□□□□□ -1.89
NEDD4-205ENST00000506154 NECTIN2Q92692 538 aa3.27□□□□□ -1.89
NEDD4-205ENST00000506154 FAM161AQ3B820 660 aa3.27□□□□□ -1.89
NEDD4-205ENST00000506154 NALCNQ8IZF0 1738 aa3.27□□□□□ -1.89
NEDD4-205ENST00000506154 STRCQ7RTU9 1775 aa3.27□□□□□ -1.89
NEDD4-205ENST00000506154 CPS1P31327 1500 aa3.27□□□□□ -1.89
NEDD4-205ENST00000506154 SUPT16HQ9Y5B9 1047 aaKnown RBP3.27□□□□□ -1.89
NEDD4-205ENST00000506154 LMO7Q8WWI1 1683 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 STRCP1A6NGW2 1772 aa3.26□□□□□ -1.89
NEDD4-205ENST00000506154 PTPRMP28827 1452 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms