RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 PIK3C2BO00750 1634 aa16.59■□□□□ 0.25
SGCA-205ENST00000505964 TXNDC2Q86VQ3 553 aa16.58■□□□□ 0.24
SGCA-205ENST00000505964 KANK1Q14678 1352 aa16.58■□□□□ 0.24
SGCA-205ENST00000505964 ROBO1Q9Y6N7 1651 aa16.58■□□□□ 0.24
SGCA-205ENST00000505964 SLIT1O75093 1534 aa16.57■□□□□ 0.24
SGCA-205ENST00000505964 LMTK2Q8IWU2 1503 aa16.57■□□□□ 0.24
SGCA-205ENST00000505964 ARHGAP23Q9P227 1491 aa16.57■□□□□ 0.24
SGCA-205ENST00000505964 POTEAQ6S8J7 498 aa16.57■□□□□ 0.24
SGCA-205ENST00000505964 E9PCH4 1651 aa16.54■□□□□ 0.24
SGCA-205ENST00000505964 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
SGCA-205ENST00000505964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.24
SGCA-205ENST00000505964 EID1Q9Y6B2 187 aa16.52■□□□□ 0.24
SGCA-205ENST00000505964 FAM135BQ49AJ0 1406 aa16.52■□□□□ 0.23
SGCA-205ENST00000505964 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
SGCA-205ENST00000505964 ANKRD30BQ9BXX2 1392 aa16.51■□□□□ 0.23
SGCA-205ENST00000505964 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
SGCA-205ENST00000505964 PHLPP1O60346 1717 aa16.5■□□□□ 0.23
SGCA-205ENST00000505964 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
SGCA-205ENST00000505964 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
SGCA-205ENST00000505964 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
SGCA-205ENST00000505964 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
SGCA-205ENST00000505964 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
SGCA-205ENST00000505964 RPRD2Q5VT52 1461 aaKnown RBP16.48■□□□□ 0.23
SGCA-205ENST00000505964 ARHGAP31Q2M1Z3 1444 aa16.47■□□□□ 0.23
SGCA-205ENST00000505964 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.23
SGCA-205ENST00000505964 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
SGCA-205ENST00000505964 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
SGCA-205ENST00000505964 FOXD1Q16676 465 aa16.45■□□□□ 0.22
SGCA-205ENST00000505964 KCNA6P17658 529 aa16.44■□□□□ 0.22
SGCA-205ENST00000505964 TRPM2O94759 1503 aa16.44■□□□□ 0.22
SGCA-205ENST00000505964 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
SGCA-205ENST00000505964 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
SGCA-205ENST00000505964 IDI1Q13907 227 aa16.42■□□□□ 0.22
SGCA-205ENST00000505964 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
SGCA-205ENST00000505964 ADGRB3O60242 1522 aa16.4■□□□□ 0.22
SGCA-205ENST00000505964 BCANQ96GW7 911 aa16.4■□□□□ 0.22
SGCA-205ENST00000505964 NKTRP30414 1462 aaKnown RBP16.4■□□□□ 0.22
SGCA-205ENST00000505964 MSH6P52701 1360 aa16.39■□□□□ 0.21
SGCA-205ENST00000505964 CCDC144AA2RUR9 1427 aa16.39■□□□□ 0.21
SGCA-205ENST00000505964 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.21
SGCA-205ENST00000505964 NEUROD1Q13562 356 aa16.39■□□□□ 0.21
SGCA-205ENST00000505964 KIF1BO60333 1816 aa16.38■□□□□ 0.21
SGCA-205ENST00000505964 SRCAPQ6ZRS2 3230 aa16.38■□□□□ 0.21
SGCA-205ENST00000505964 SLAIN2Q9P270 581 aa16.37■□□□□ 0.21
SGCA-205ENST00000505964 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
SGCA-205ENST00000505964 TONSLQ96HA7 1378 aa16.37■□□□□ 0.21
SGCA-205ENST00000505964 JCADQ9P266 1359 aa16.37■□□□□ 0.21
SGCA-205ENST00000505964 LRP6O75581 1613 aa16.36■□□□□ 0.21
SGCA-205ENST00000505964 NOS1P29475 1434 aa16.36■□□□□ 0.21
SGCA-205ENST00000505964 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.2
SGCA-205ENST00000505964 MEX3CQ5U5Q3 659 aaKnown RBP16.32■□□□□ 0.2
SGCA-205ENST00000505964 SHPRHQ149N8 1683 aa16.31■□□□□ 0.2
SGCA-205ENST00000505964 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.2
SGCA-205ENST00000505964 ZFYVE9O95405 1425 aa16.3■□□□□ 0.2
SGCA-205ENST00000505964 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
SGCA-205ENST00000505964 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
SGCA-205ENST00000505964 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
SGCA-205ENST00000505964 SPATA31E1Q6ZUB1 1445 aa16.28■□□□□ 0.2
SGCA-205ENST00000505964 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
SGCA-205ENST00000505964 PLEKHG1Q9ULL1 1385 aa16.28■□□□□ 0.2
SGCA-205ENST00000505964 AHDC1Q5TGY3 1603 aaPredicted RBP16.27■□□□□ 0.2
SGCA-205ENST00000505964 L3MBTL2Q969R5 705 aa16.27■□□□□ 0.2
SGCA-205ENST00000505964 IFT172Q9UG01 1749 aa16.26■□□□□ 0.19
SGCA-205ENST00000505964 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
SGCA-205ENST00000505964 SLC52A1Q9NWF4 448 aa16.26■□□□□ 0.19
SGCA-205ENST00000505964 SPATA31A6Q5VVP1 1343 aa16.25■□□□□ 0.19
SGCA-205ENST00000505964 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
SGCA-205ENST00000505964 NUTM2BA6NNL0 878 aaPredicted RBP16.24■□□□□ 0.19
SGCA-205ENST00000505964 NUTM2EB1AL46 878 aaPredicted RBP16.24■□□□□ 0.19
SGCA-205ENST00000505964 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
SGCA-205ENST00000505964 NUTM2AQ8IVF1 878 aaPredicted RBP16.24■□□□□ 0.19
SGCA-205ENST00000505964 DIP2AQ14689 1571 aa16.23■□□□□ 0.19
SGCA-205ENST00000505964 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
SGCA-205ENST00000505964 PPLO60437 1756 aa16.22■□□□□ 0.19
SGCA-205ENST00000505964 ADAMTS13Q76LX8 1427 aa16.21■□□□□ 0.19
SGCA-205ENST00000505964 ATF3P18847 181 aa16.21■□□□□ 0.19
SGCA-205ENST00000505964 RXRBP28702 533 aa16.21■□□□□ 0.19
SGCA-205ENST00000505964 CADPS2Q86UW7 1296 aa16.2■□□□□ 0.18
SGCA-205ENST00000505964 TBX22Q9Y458 520 aa16.2■□□□□ 0.18
SGCA-205ENST00000505964 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
SGCA-205ENST00000505964 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
SGCA-205ENST00000505964 BRINP3Q76B58 766 aa16.18■□□□□ 0.18
SGCA-205ENST00000505964 C19orf44Q9H6X5 657 aa16.18■□□□□ 0.18
SGCA-205ENST00000505964 NHSL1Q5SYE7 1610 aa16.18■□□□□ 0.18
SGCA-205ENST00000505964 AFF2P51816 1311 aa16.18■□□□□ 0.18
SGCA-205ENST00000505964 RPGRIP1LQ68CZ1 1315 aa16.18■□□□□ 0.18
SGCA-205ENST00000505964 MYOM2P54296 1465 aa16.17■□□□□ 0.18
SGCA-205ENST00000505964 EP400Q96L91 3159 aa16.17■□□□□ 0.18
SGCA-205ENST00000505964 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
SGCA-205ENST00000505964 DCAF11Q8TEB1 546 aa16.17■□□□□ 0.18
SGCA-205ENST00000505964 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
SGCA-205ENST00000505964 ASXL1Q8IXJ9 1541 aa16.16■□□□□ 0.18
SGCA-205ENST00000505964 KIAA1210Q9ULL0 1709 aa16.16■□□□□ 0.18
SGCA-205ENST00000505964 PRAG1Q86YV5 1406 aa16.15■□□□□ 0.18
SGCA-205ENST00000505964 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.15■□□□□ 0.18
SGCA-205ENST00000505964 TRPM1Q7Z4N2 1603 aa16.15■□□□□ 0.18
SGCA-205ENST00000505964 CDK12Q9NYV4 1490 aaPredicted RBP16.15■□□□□ 0.18
SGCA-205ENST00000505964 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.18
SGCA-205ENST00000505964 AMOTL2Q9Y2J4 779 aa16.14■□□□□ 0.17
SGCA-205ENST00000505964 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms