RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 STAG3Q9UJ98 1225 aa10.57□□□□□ -0.72
NR1I3-221ENST00000505944 MSH6P52701 1360 aa10.56□□□□□ -0.72
NR1I3-221ENST00000505944 JCADQ9P266 1359 aa10.56□□□□□ -0.72
NR1I3-221ENST00000505944 EFCAB6Q5THR3 1501 aa10.56□□□□□ -0.72
NR1I3-221ENST00000505944 ROBO1Q9Y6N7 1651 aa10.56□□□□□ -0.72
NR1I3-221ENST00000505944 NCOA3Q9Y6Q9 1424 aa10.55□□□□□ -0.72
NR1I3-221ENST00000505944 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
NR1I3-221ENST00000505944 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
NR1I3-221ENST00000505944 NWD1Q149M9 1564 aa10.54□□□□□ -0.72
NR1I3-221ENST00000505944 POTEAQ6S8J7 498 aa10.54□□□□□ -0.72
NR1I3-221ENST00000505944 FGD6Q6ZV73 1430 aa10.54□□□□□ -0.72
NR1I3-221ENST00000505944 PROSER2Q86WR7 435 aaPredicted RBP10.54□□□□□ -0.72
NR1I3-221ENST00000505944 SPATA31A6Q5VVP1 1343 aa10.54□□□□□ -0.72
NR1I3-221ENST00000505944 LMTK2Q8IWU2 1503 aa10.53□□□□□ -0.72
NR1I3-221ENST00000505944 KIF15Q9NS87 1388 aa10.53□□□□□ -0.72
NR1I3-221ENST00000505944 ZNF772Q68DY9 489 aaPredicted RBP10.53□□□□□ -0.72
NR1I3-221ENST00000505944 SLC52A1Q9NWF4 448 aa10.53□□□□□ -0.72
NR1I3-221ENST00000505944 TET3O43151 1660 aa10.52□□□□□ -0.73
NR1I3-221ENST00000505944 ABCC5O15440 1437 aa10.51□□□□□ -0.73
NR1I3-221ENST00000505944 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
NR1I3-221ENST00000505944 SLAIN2Q9P270 581 aa10.51□□□□□ -0.73
NR1I3-221ENST00000505944 DAPK1P53355 1430 aa10.5□□□□□ -0.73
NR1I3-221ENST00000505944 ADGRB3O60242 1522 aa10.5□□□□□ -0.73
NR1I3-221ENST00000505944 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
NR1I3-221ENST00000505944 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
NR1I3-221ENST00000505944 IDI1Q13907 227 aa10.49□□□□□ -0.73
NR1I3-221ENST00000505944 CDK12Q9NYV4 1490 aaPredicted RBP10.49□□□□□ -0.73
NR1I3-221ENST00000505944 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
NR1I3-221ENST00000505944 RRP7BPQ9NSQ0 103 aa10.48□□□□□ -0.73
NR1I3-221ENST00000505944 NOS1P29475 1434 aa10.48□□□□□ -0.73
NR1I3-221ENST00000505944 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
NR1I3-221ENST00000505944 SLC26A8Q96RN1 970 aa10.47□□□□□ -0.73
NR1I3-221ENST00000505944 PIK3R4Q99570 1358 aa10.47□□□□□ -0.73
NR1I3-221ENST00000505944 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
NR1I3-221ENST00000505944 PLEKHG1Q9ULL1 1385 aa10.47□□□□□ -0.73
NR1I3-221ENST00000505944 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-221ENST00000505944 GCC2Q8IWJ2 1684 aa10.47□□□□□ -0.73
NR1I3-221ENST00000505944 CHD2O14647 1828 aaKnown RBP10.47□□□□□ -0.73
NR1I3-221ENST00000505944 FAM50AQ14320 339 aaKnown RBP10.46□□□□□ -0.73
NR1I3-221ENST00000505944 BCANQ96GW7 911 aa10.46□□□□□ -0.73
NR1I3-221ENST00000505944 SETD1AO15047 1707 aaKnown RBP10.46□□□□□ -0.74
NR1I3-221ENST00000505944 SHPRHQ149N8 1683 aa10.45□□□□□ -0.74
NR1I3-221ENST00000505944 AHDC1Q5TGY3 1603 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-221ENST00000505944 DIP2AQ14689 1571 aa10.45□□□□□ -0.74
NR1I3-221ENST00000505944 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.45□□□□□ -0.74
NR1I3-221ENST00000505944 UPF1Q92900 1129 aaKnown RBP eCLIP10.45□□□□□ -0.74
NR1I3-221ENST00000505944 TBX22Q9Y458 520 aa10.45□□□□□ -0.74
NR1I3-221ENST00000505944 PPP1R15AO75807 674 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-221ENST00000505944 ATF3P18847 181 aa10.44□□□□□ -0.74
NR1I3-221ENST00000505944 ITGAEP38570 1179 aa10.44□□□□□ -0.74
NR1I3-221ENST00000505944 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
NR1I3-221ENST00000505944 ADGRL2O95490 1459 aa10.43□□□□□ -0.74
NR1I3-221ENST00000505944 ZFYVE9O95405 1425 aa10.43□□□□□ -0.74
NR1I3-221ENST00000505944 DCCP43146 1447 aa10.43□□□□□ -0.74
NR1I3-221ENST00000505944 RXRBP28702 533 aa10.43□□□□□ -0.74
NR1I3-221ENST00000505944 U3KPZ7 1027 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-221ENST00000505944 MYCNP04198 464 aaPredicted RBP10.42□□□□□ -0.74
NR1I3-221ENST00000505944 C14orf37Q86TY3 774 aa10.42□□□□□ -0.74
NR1I3-221ENST00000505944 RBM33Q96EV2 1170 aaKnown RBP10.42□□□□□ -0.74
NR1I3-221ENST00000505944 TMEM131LA2VDJ0 1609 aa10.42□□□□□ -0.74
NR1I3-221ENST00000505944 CHIC2Q9UKJ5 165 aa10.41□□□□□ -0.74
NR1I3-221ENST00000505944 RIMS2Q9UQ26 1411 aa10.41□□□□□ -0.74
NR1I3-221ENST00000505944 LRP6O75581 1613 aa10.4□□□□□ -0.74
NR1I3-221ENST00000505944 UNC13BO14795 1591 aa10.39□□□□□ -0.75
NR1I3-221ENST00000505944 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-221ENST00000505944 TRPM2O94759 1503 aa10.38□□□□□ -0.75
NR1I3-221ENST00000505944 E9PCH4 1651 aa10.38□□□□□ -0.75
NR1I3-221ENST00000505944 TRIM52Q96A61 297 aa10.38□□□□□ -0.75
NR1I3-221ENST00000505944 SETD5Q9C0A6 1442 aa10.38□□□□□ -0.75
NR1I3-221ENST00000505944 ANKRD50Q9ULJ7 1429 aa10.38□□□□□ -0.75
NR1I3-221ENST00000505944 LRRC59Q96AG4 307 aaKnown RBP10.37□□□□□ -0.75
NR1I3-221ENST00000505944 SRCAPQ6ZRS2 3230 aa10.36□□□□□ -0.75
NR1I3-221ENST00000505944 RBM6P78332 1123 aaKnown RBP10.36□□□□□ -0.75
NR1I3-221ENST00000505944 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
NR1I3-221ENST00000505944 IQGAP3Q86VI3 1631 aa10.36□□□□□ -0.75
NR1I3-221ENST00000505944 ADAMTS13Q76LX8 1427 aa10.35□□□□□ -0.75
NR1I3-221ENST00000505944 ASXL1Q8IXJ9 1541 aa10.34□□□□□ -0.75
NR1I3-221ENST00000505944 BRINP3Q76B58 766 aa10.34□□□□□ -0.75
NR1I3-221ENST00000505944 AFF2P51816 1311 aa10.33□□□□□ -0.76
NR1I3-221ENST00000505944 RRBP1Q9P2E9 1410 aaKnown RBP10.33□□□□□ -0.76
NR1I3-221ENST00000505944 ATAD2Q6PL18 1390 aa10.33□□□□□ -0.76
NR1I3-221ENST00000505944 XRN1Q8IZH2 1706 aaKnown RBP10.33□□□□□ -0.76
NR1I3-221ENST00000505944 NHSL1Q5SYE7 1610 aa10.33□□□□□ -0.76
NR1I3-221ENST00000505944 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
NR1I3-221ENST00000505944 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
NR1I3-221ENST00000505944 NRXN3Q9Y4C0 1643 aa10.32□□□□□ -0.76
NR1I3-221ENST00000505944 SPHKAPQ2M3C7 1700 aa10.31□□□□□ -0.76
NR1I3-221ENST00000505944 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-221ENST00000505944 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-221ENST00000505944 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-221ENST00000505944 QTRT2Q9H974 415 aaKnown RBP10.31□□□□□ -0.76
NR1I3-221ENST00000505944 RGS12O14924 1447 aa10.31□□□□□ -0.76
NR1I3-221ENST00000505944 SETBP1Q9Y6X0 1596 aa10.31□□□□□ -0.76
NR1I3-221ENST00000505944 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
NR1I3-221ENST00000505944 MST1RQ04912 1400 aa10.3□□□□□ -0.76
NR1I3-221ENST00000505944 NUTM2DQ5VT03 806 aaPredicted RBP10.29□□□□□ -0.76
NR1I3-221ENST00000505944 C8orf37Q96NL8 207 aa10.29□□□□□ -0.76
NR1I3-221ENST00000505944 ZRANB1Q9UGI0 708 aa10.29□□□□□ -0.76
NR1I3-221ENST00000505944 PTPRUQ92729 1446 aa10.29□□□□□ -0.76
NR1I3-221ENST00000505944 ADGRL3Q9HAR2 1447 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms