RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 AGLP35573 1532 aa19.74■□□□□ 0.75
SH3D21-205ENST00000505871 PIK3C2BO00750 1634 aa19.74■□□□□ 0.75
SH3D21-205ENST00000505871 SYNMO15061 1565 aa19.72■□□□□ 0.75
SH3D21-205ENST00000505871 PPLO60437 1756 aa19.71■□□□□ 0.75
SH3D21-205ENST00000505871 RPGRIP1LQ68CZ1 1315 aa19.71■□□□□ 0.75
SH3D21-205ENST00000505871 TMF1P82094 1093 aa19.71■□□□□ 0.75
SH3D21-205ENST00000505871 ADGRF5Q8IZF2 1346 aa19.7■□□□□ 0.74
SH3D21-205ENST00000505871 DISP3Q9P2K9 1392 aa19.7■□□□□ 0.74
SH3D21-205ENST00000505871 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
SH3D21-205ENST00000505871 CHGAP10645 457 aaKnown RBP19.69■□□□□ 0.74
SH3D21-205ENST00000505871 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
SH3D21-205ENST00000505871 PREX1Q8TCU6 1659 aa19.67■□□□□ 0.74
SH3D21-205ENST00000505871 ARHGEF40Q8TER5 1519 aa19.67■□□□□ 0.74
SH3D21-205ENST00000505871 KTN1Q86UP2 1357 aaKnown RBP19.67■□□□□ 0.74
SH3D21-205ENST00000505871 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
SH3D21-205ENST00000505871 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
SH3D21-205ENST00000505871 CFAP70Q5T0N1 1121 aa19.66■□□□□ 0.74
SH3D21-205ENST00000505871 SETBP1Q9Y6X0 1596 aa19.65■□□□□ 0.74
SH3D21-205ENST00000505871 SLC52A1Q9NWF4 448 aa19.65■□□□□ 0.74
SH3D21-205ENST00000505871 PIK3C2GO75747 1445 aa19.65■□□□□ 0.74
SH3D21-205ENST00000505871 SLC24A1O60721 1099 aa19.62■□□□□ 0.73
SH3D21-205ENST00000505871 CDCA8Q53HL2 280 aa19.62■□□□□ 0.73
SH3D21-205ENST00000505871 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
SH3D21-205ENST00000505871 RALBP1Q15311 655 aa19.6■□□□□ 0.73
SH3D21-205ENST00000505871 IDI1Q13907 227 aa19.6■□□□□ 0.73
SH3D21-205ENST00000505871 MYO3AQ8NEV4 1616 aa19.59■□□□□ 0.73
SH3D21-205ENST00000505871 C14orf93Q9H972 538 aaKnown RBP19.59■□□□□ 0.73
SH3D21-205ENST00000505871 ERVK-7P63135 1459 aa19.59■□□□□ 0.73
SH3D21-205ENST00000505871 PER1O15534 1290 aaPredicted RBP19.59■□□□□ 0.73
SH3D21-205ENST00000505871 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
SH3D21-205ENST00000505871 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.72
SH3D21-205ENST00000505871 VGFO15240 615 aaPredicted RBP19.57■□□□□ 0.72
SH3D21-205ENST00000505871 TMEM131LA2VDJ0 1609 aa19.57■□□□□ 0.72
SH3D21-205ENST00000505871 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
SH3D21-205ENST00000505871 ADGRB1O14514 1584 aa19.57■□□□□ 0.72
SH3D21-205ENST00000505871 MYBBP1AQ9BQG0 1328 aaKnown RBP19.56■□□□□ 0.72
SH3D21-205ENST00000505871 SBNO2Q9Y2G9 1366 aa19.55■□□□□ 0.72
SH3D21-205ENST00000505871 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
SH3D21-205ENST00000505871 PANK3Q9H999 370 aa19.55■□□□□ 0.72
SH3D21-205ENST00000505871 PARD3Q8TEW0 1356 aa19.54■□□□□ 0.72
SH3D21-205ENST00000505871 KDM5AP29375 1690 aaKnown RBP19.54■□□□□ 0.72
SH3D21-205ENST00000505871 CNGB1Q14028 1251 aaPredicted RBP19.54■□□□□ 0.72
SH3D21-205ENST00000505871 BRD4O60885 1362 aaPredicted RBP19.53■□□□□ 0.72
SH3D21-205ENST00000505871 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
SH3D21-205ENST00000505871 SPATA31D1Q6ZQQ2 1576 aa19.53■□□□□ 0.72
SH3D21-205ENST00000505871 FBXO31Q5XUX0 539 aaPredicted RBP19.52■□□□□ 0.72
SH3D21-205ENST00000505871 MYOM1P52179 1685 aa19.5■□□□□ 0.71
SH3D21-205ENST00000505871 CENPJQ9HC77 1338 aaPredicted RBP19.5■□□□□ 0.71
SH3D21-205ENST00000505871 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
SH3D21-205ENST00000505871 MLECQ14165 292 aa19.48■□□□□ 0.71
SH3D21-205ENST00000505871 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
SH3D21-205ENST00000505871 QRICH2Q9H0J4 1663 aa19.47■□□□□ 0.71
SH3D21-205ENST00000505871 PNISRQ8TF01 805 aaKnown RBP19.47■□□□□ 0.71
SH3D21-205ENST00000505871 ZBED9Q6R2W3 1325 aa19.46■□□□□ 0.71
SH3D21-205ENST00000505871 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
SH3D21-205ENST00000505871 TRAK1Q9UPV9 953 aa19.46■□□□□ 0.71
SH3D21-205ENST00000505871 TMEM132EQ6IEE7 984 aa19.45■□□□□ 0.7
SH3D21-205ENST00000505871 ESF1Q9H501 851 aaKnown RBP19.45■□□□□ 0.7
SH3D21-205ENST00000505871 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
SH3D21-205ENST00000505871 ARHGEF28Q8N1W1 1705 aaKnown RBP19.43■□□□□ 0.7
SH3D21-205ENST00000505871 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
SH3D21-205ENST00000505871 ZMYM3Q14202 1370 aa19.43■□□□□ 0.7
SH3D21-205ENST00000505871 CC2D1BQ5T0F9 858 aaKnown RBP19.43■□□□□ 0.7
SH3D21-205ENST00000505871 STAG3Q9UJ98 1225 aa19.43■□□□□ 0.7
SH3D21-205ENST00000505871 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
SH3D21-205ENST00000505871 ASXL1Q8IXJ9 1541 aa19.42■□□□□ 0.7
SH3D21-205ENST00000505871 NPC1L1Q9UHC9 1359 aa19.42■□□□□ 0.7
SH3D21-205ENST00000505871 SUPT16HQ9Y5B9 1047 aaKnown RBP19.41■□□□□ 0.7
SH3D21-205ENST00000505871 AMER1Q5JTC6 1135 aaPredicted RBP19.4■□□□□ 0.7
SH3D21-205ENST00000505871 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
SH3D21-205ENST00000505871 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
SH3D21-205ENST00000505871 RIMS2Q9UQ26 1411 aa19.36■□□□□ 0.69
SH3D21-205ENST00000505871 NEFLP07196 543 aa19.34■□□□□ 0.69
SH3D21-205ENST00000505871 INSRP06213 1382 aa19.34■□□□□ 0.69
SH3D21-205ENST00000505871 TNRQ92752 1358 aa19.34■□□□□ 0.69
SH3D21-205ENST00000505871 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.69
SH3D21-205ENST00000505871 EVC2Q86UK5 1308 aa19.33■□□□□ 0.69
SH3D21-205ENST00000505871 TULP4Q9NRJ4 1543 aa19.33■□□□□ 0.68
SH3D21-205ENST00000505871 PTPRMP28827 1452 aa19.32■□□□□ 0.68
SH3D21-205ENST00000505871 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
SH3D21-205ENST00000505871 PPP2R1AP30153 589 aa19.3■□□□□ 0.68
SH3D21-205ENST00000505871 FKBP8Q14318 412 aa19.29■□□□□ 0.68
SH3D21-205ENST00000505871 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
SH3D21-205ENST00000505871 STK26Q9P289 416 aa19.29■□□□□ 0.68
SH3D21-205ENST00000505871 SETD1AO15047 1707 aaKnown RBP19.29■□□□□ 0.68
SH3D21-205ENST00000505871 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
SH3D21-205ENST00000505871 DLC1Q96QB1 1528 aa19.27■□□□□ 0.68
SH3D21-205ENST00000505871 HDGFP51858 240 aaKnown RBP19.27■□□□□ 0.68
SH3D21-205ENST00000505871 SMG6Q86US8 1419 aaKnown RBP19.27■□□□□ 0.68
SH3D21-205ENST00000505871 USP32Q8NFA0 1604 aa19.26■□□□□ 0.67
SH3D21-205ENST00000505871 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
SH3D21-205ENST00000505871 SLC12A5Q9H2X9 1139 aa19.25■□□□□ 0.67
SH3D21-205ENST00000505871 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
SH3D21-205ENST00000505871 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
SH3D21-205ENST00000505871 NINLQ9Y2I6 1382 aa19.25■□□□□ 0.67
SH3D21-205ENST00000505871 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
SH3D21-205ENST00000505871 NLRP1Q9C000 1473 aa19.24■□□□□ 0.67
SH3D21-205ENST00000505871 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
SH3D21-205ENST00000505871 POGKQ9P215 609 aa19.24■□□□□ 0.67
SH3D21-205ENST00000505871 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms