RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
PRDM5-207ENST00000505484 ZNF521Q96K83 1311 aa20.52■□□□□ 0.88
PRDM5-207ENST00000505484 RGS3P49796 1198 aa20.52■□□□□ 0.88
PRDM5-207ENST00000505484 TRPM1Q7Z4N2 1603 aa20.51■□□□□ 0.87
PRDM5-207ENST00000505484 EFCAB2Q5VUJ9 269 aa20.51■□□□□ 0.87
PRDM5-207ENST00000505484 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
PRDM5-207ENST00000505484 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
PRDM5-207ENST00000505484 LAMC1P11047 1609 aa20.5■□□□□ 0.87
PRDM5-207ENST00000505484 GOLGA2Q08379 1002 aa20.49■□□□□ 0.87
PRDM5-207ENST00000505484 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
PRDM5-207ENST00000505484 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
PRDM5-207ENST00000505484 PLEKHH1Q9ULM0 1364 aa20.48■□□□□ 0.87
PRDM5-207ENST00000505484 TRAPPC8Q9Y2L5 1435 aa20.48■□□□□ 0.87
PRDM5-207ENST00000505484 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
PRDM5-207ENST00000505484 CLCN1P35523 988 aa20.46■□□□□ 0.87
PRDM5-207ENST00000505484 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
PRDM5-207ENST00000505484 CCDC141Q6ZP82 1450 aa20.46■□□□□ 0.87
PRDM5-207ENST00000505484 PANK3Q9H999 370 aa20.45■□□□□ 0.86
PRDM5-207ENST00000505484 SLFN5Q08AF3 891 aa20.44■□□□□ 0.86
PRDM5-207ENST00000505484 TRMT2AQ8IZ69 625 aaKnown RBP20.44■□□□□ 0.86
PRDM5-207ENST00000505484 FANCAO15360 1455 aa20.44■□□□□ 0.86
PRDM5-207ENST00000505484 FSD2A1L4K1 749 aa20.44■□□□□ 0.86
PRDM5-207ENST00000505484 RRP9O43818 475 aaKnown RBP20.44■□□□□ 0.86
PRDM5-207ENST00000505484 TESK2Q96S53 571 aa20.44■□□□□ 0.86
PRDM5-207ENST00000505484 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
PRDM5-207ENST00000505484 PRDM15P57071 1507 aaPredicted RBP20.43■□□□□ 0.86
PRDM5-207ENST00000505484 DISP3Q9P2K9 1392 aa20.42■□□□□ 0.86
PRDM5-207ENST00000505484 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
PRDM5-207ENST00000505484 ERBINQ96RT1 1412 aa20.42■□□□□ 0.86
PRDM5-207ENST00000505484 ABCA9Q8IUA7 1624 aa20.42■□□□□ 0.86
PRDM5-207ENST00000505484 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
PRDM5-207ENST00000505484 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
PRDM5-207ENST00000505484 GOLGA6L3A6NEY3 463 aa20.41■□□□□ 0.86
PRDM5-207ENST00000505484 ARHGEF5Q12774 1597 aa20.4■□□□□ 0.86
PRDM5-207ENST00000505484 XRCC6P12956 609 aaKnown RBP eCLIP20.4■□□□□ 0.86
PRDM5-207ENST00000505484 CD109Q6YHK3 1445 aa20.39■□□□□ 0.86
PRDM5-207ENST00000505484 CGNL1Q0VF96 1302 aa20.39■□□□□ 0.86
PRDM5-207ENST00000505484 ABCC1P33527 1531 aa20.39■□□□□ 0.85
PRDM5-207ENST00000505484 NINLQ9Y2I6 1382 aa20.39■□□□□ 0.85
PRDM5-207ENST00000505484 TMF1P82094 1093 aa20.39■□□□□ 0.85
PRDM5-207ENST00000505484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
PRDM5-207ENST00000505484 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.85
PRDM5-207ENST00000505484 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
PRDM5-207ENST00000505484 HSP90AA1P07900 732 aaKnown RBP20.38■□□□□ 0.85
PRDM5-207ENST00000505484 NAP1L5Q96NT1 182 aaPredicted RBP20.38■□□□□ 0.85
PRDM5-207ENST00000505484 HSP90AA2PQ14568 343 aaPredicted RBP20.37■□□□□ 0.85
PRDM5-207ENST00000505484 PDE3AQ14432 1141 aa20.37■□□□□ 0.85
PRDM5-207ENST00000505484 SCAPERQ9BY12 1400 aa20.37■□□□□ 0.85
PRDM5-207ENST00000505484 IGHDP01880 384 aa20.36■□□□□ 0.85
PRDM5-207ENST00000505484 PPP2R1AP30153 589 aa20.36■□□□□ 0.85
PRDM5-207ENST00000505484 NBPF1Q3BBV0 1214 aa20.36■□□□□ 0.85
PRDM5-207ENST00000505484 SEC24BO95487 1268 aa20.36■□□□□ 0.85
PRDM5-207ENST00000505484 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
PRDM5-207ENST00000505484 UPF2Q9HAU5 1272 aaKnown RBP20.36■□□□□ 0.85
PRDM5-207ENST00000505484 ADGRL1O94910 1474 aa20.35■□□□□ 0.85
PRDM5-207ENST00000505484 CCDC144AA2RUR9 1427 aa20.35■□□□□ 0.85
PRDM5-207ENST00000505484 EIF2AK4Q9P2K8 1649 aaKnown RBP20.34■□□□□ 0.85
PRDM5-207ENST00000505484 SPAG9O60271 1321 aaKnown RBP20.34■□□□□ 0.85
PRDM5-207ENST00000505484 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
PRDM5-207ENST00000505484 RAPGEF3O95398 923 aa20.34■□□□□ 0.85
PRDM5-207ENST00000505484 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
PRDM5-207ENST00000505484 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
PRDM5-207ENST00000505484 ZMYND15Q9H091 742 aa20.34■□□□□ 0.85
PRDM5-207ENST00000505484 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.85
PRDM5-207ENST00000505484 MCM4P33991 863 aa20.32■□□□□ 0.84
PRDM5-207ENST00000505484 AAMPQ13685 434 aa20.32■□□□□ 0.84
PRDM5-207ENST00000505484 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
PRDM5-207ENST00000505484 ISY1Q9ULR0 285 aaKnown RBP20.32■□□□□ 0.84
PRDM5-207ENST00000505484 E9PSI1 815 aa20.31■□□□□ 0.84
PRDM5-207ENST00000505484 MRE11P49959 708 aa20.31■□□□□ 0.84
PRDM5-207ENST00000505484 CLUAP1Q96AJ1 413 aa20.31■□□□□ 0.84
PRDM5-207ENST00000505484 FAM135AQ9P2D6 1515 aa20.31■□□□□ 0.84
PRDM5-207ENST00000505484 TBC1D2Q9BYX2 928 aa20.31■□□□□ 0.84
PRDM5-207ENST00000505484 A2MP01023 1474 aa20.31■□□□□ 0.84
PRDM5-207ENST00000505484 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
PRDM5-207ENST00000505484 BCAR3O75815 825 aa20.29■□□□□ 0.84
PRDM5-207ENST00000505484 MAGI2Q86UL8 1455 aa20.28■□□□□ 0.84
PRDM5-207ENST00000505484 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
PRDM5-207ENST00000505484 NPC1L1Q9UHC9 1359 aa20.27■□□□□ 0.84
PRDM5-207ENST00000505484 PANK2Q9BZ23 570 aa20.27■□□□□ 0.83
PRDM5-207ENST00000505484 PLXNC1O60486 1568 aa20.26■□□□□ 0.83
PRDM5-207ENST00000505484 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
PRDM5-207ENST00000505484 PMFBP1Q8TBY8 1022 aa20.26■□□□□ 0.83
PRDM5-207ENST00000505484 CHMP5Q9NZZ3 219 aa20.25■□□□□ 0.83
PRDM5-207ENST00000505484 TSPOAP1O95153 1857 aa20.25■□□□□ 0.83
PRDM5-207ENST00000505484 SPINK5Q9NQ38 1064 aaPredicted RBP20.24■□□□□ 0.83
PRDM5-207ENST00000505484 TRAK2O60296 914 aa20.24■□□□□ 0.83
PRDM5-207ENST00000505484 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
PRDM5-207ENST00000505484 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
PRDM5-207ENST00000505484 ASXL1Q8IXJ9 1541 aa20.23■□□□□ 0.83
PRDM5-207ENST00000505484 PLA2R1Q13018 1463 aa20.22■□□□□ 0.83
PRDM5-207ENST00000505484 MYH16Q9H6N6 1097 aa20.22■□□□□ 0.83
PRDM5-207ENST00000505484 SYNMO15061 1565 aa20.22■□□□□ 0.83
PRDM5-207ENST00000505484 ESPNB1AK53 854 aa20.22■□□□□ 0.83
PRDM5-207ENST00000505484 RGL3Q3MIN7 710 aa20.22■□□□□ 0.83
PRDM5-207ENST00000505484 RNF17Q9BXT8 1623 aaKnown RBP20.21■□□□□ 0.83
PRDM5-207ENST00000505484 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
PRDM5-207ENST00000505484 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
PRDM5-207ENST00000505484 APAF1O14727 1248 aa20.21■□□□□ 0.83
PRDM5-207ENST00000505484 DDX11L8A8MPP1 907 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms