RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-219ENST00000505392 NOS1P29475 1434 aa18.17■□□□□ 0.5
CCHCR1-219ENST00000505392 LOC105371045A0A1W2PR82 267 aa18.17■□□□□ 0.5
CCHCR1-219ENST00000505392 PHLPP1O60346 1717 aa18.17■□□□□ 0.5
CCHCR1-219ENST00000505392 RXRBP28702 533 aa18.16■□□□□ 0.5
CCHCR1-219ENST00000505392 TBX22Q9Y458 520 aa18.16■□□□□ 0.5
CCHCR1-219ENST00000505392 ANKRD30AQ9BXX3 1397 aa18.15■□□□□ 0.5
CCHCR1-219ENST00000505392 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
CCHCR1-219ENST00000505392 ATF3P18847 181 aa18.14■□□□□ 0.49
CCHCR1-219ENST00000505392 CADPS2Q86UW7 1296 aa18.14■□□□□ 0.49
CCHCR1-219ENST00000505392 C19orf44Q9H6X5 657 aa18.14■□□□□ 0.49
CCHCR1-219ENST00000505392 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-219ENST00000505392 PLEKHG1Q9ULL1 1385 aa18.14■□□□□ 0.49
CCHCR1-219ENST00000505392 DAPK1P53355 1430 aa18.14■□□□□ 0.49
CCHCR1-219ENST00000505392 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
CCHCR1-219ENST00000505392 LRP6O75581 1613 aa18.13■□□□□ 0.49
CCHCR1-219ENST00000505392 FGD6Q6ZV73 1430 aa18.13■□□□□ 0.49
CCHCR1-219ENST00000505392 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-219ENST00000505392 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-219ENST00000505392 CHGAP10645 457 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-219ENST00000505392 NUTM2DQ5VT03 806 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-219ENST00000505392 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-219ENST00000505392 APLP2Q06481 763 aa18.11■□□□□ 0.49
CCHCR1-219ENST00000505392 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
CCHCR1-219ENST00000505392 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
CCHCR1-219ENST00000505392 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
CCHCR1-219ENST00000505392 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCHCR1-219ENST00000505392 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-219ENST00000505392 ZFYVE9O95405 1425 aa18.09■□□□□ 0.49
CCHCR1-219ENST00000505392 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.48
CCHCR1-219ENST00000505392 BRINP3Q76B58 766 aa18.07■□□□□ 0.48
CCHCR1-219ENST00000505392 AMOTL2Q9Y2J4 779 aa18.06■□□□□ 0.48
CCHCR1-219ENST00000505392 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-219ENST00000505392 AFF2P51816 1311 aa18.04■□□□□ 0.48
CCHCR1-219ENST00000505392 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
CCHCR1-219ENST00000505392 RPRD2Q5VT52 1461 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-219ENST00000505392 ADAMTS13Q76LX8 1427 aa18.02■□□□□ 0.48
CCHCR1-219ENST00000505392 QTRT2Q9H974 415 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-219ENST00000505392 LRRC59Q96AG4 307 aaKnown RBP18.01■□□□□ 0.47
CCHCR1-219ENST00000505392 PIK3R4Q99570 1358 aa18.01■□□□□ 0.47
CCHCR1-219ENST00000505392 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
CCHCR1-219ENST00000505392 ANKRD50Q9ULJ7 1429 aa18■□□□□ 0.47
CCHCR1-219ENST00000505392 FAM50AQ14320 339 aaKnown RBP18■□□□□ 0.47
CCHCR1-219ENST00000505392 C8orf37Q96NL8 207 aa18■□□□□ 0.47
CCHCR1-219ENST00000505392 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-219ENST00000505392 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-219ENST00000505392 CDK12Q9NYV4 1490 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-219ENST00000505392 TMEM131LA2VDJ0 1609 aa17.98■□□□□ 0.47
CCHCR1-219ENST00000505392 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
CCHCR1-219ENST00000505392 DDX17Q92841 729 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-219ENST00000505392 PTPRUQ92729 1446 aa17.96■□□□□ 0.47
CCHCR1-219ENST00000505392 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
CCHCR1-219ENST00000505392 SETD5Q9C0A6 1442 aa17.95■□□□□ 0.46
CCHCR1-219ENST00000505392 MYO5BQ9ULV0 1848 aa17.95■□□□□ 0.46
CCHCR1-219ENST00000505392 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
CCHCR1-219ENST00000505392 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
CCHCR1-219ENST00000505392 SRCAPQ6ZRS2 3230 aa17.93■□□□□ 0.46
CCHCR1-219ENST00000505392 DIP2AQ14689 1571 aa17.93■□□□□ 0.46
CCHCR1-219ENST00000505392 ADAMTS2O95450 1211 aa17.92■□□□□ 0.46
CCHCR1-219ENST00000505392 RGS12O14924 1447 aa17.91■□□□□ 0.46
CCHCR1-219ENST00000505392 DCCP43146 1447 aa17.9■□□□□ 0.46
CCHCR1-219ENST00000505392 ASXL1Q8IXJ9 1541 aa17.9■□□□□ 0.46
CCHCR1-219ENST00000505392 MST1RQ04912 1400 aa17.89■□□□□ 0.46
CCHCR1-219ENST00000505392 TRPM2O94759 1503 aa17.89■□□□□ 0.45
CCHCR1-219ENST00000505392 PNPLA6Q8IY17 1366 aa17.89■□□□□ 0.45
CCHCR1-219ENST00000505392 ZNF326Q5BKZ1 582 aaKnown RBP17.87■□□□□ 0.45
CCHCR1-219ENST00000505392 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
CCHCR1-219ENST00000505392 USP21Q9UK80 565 aa17.86■□□□□ 0.45
CCHCR1-219ENST00000505392 METP08581 1390 aa17.86■□□□□ 0.45
CCHCR1-219ENST00000505392 FOXD1Q16676 465 aa17.85■□□□□ 0.45
CCHCR1-219ENST00000505392 NUP155O75694 1391 aa17.84■□□□□ 0.45
CCHCR1-219ENST00000505392 ATAD2Q6PL18 1390 aa17.84■□□□□ 0.45
CCHCR1-219ENST00000505392 TRPC5Q9UL62 973 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-219ENST00000505392 E9PCH4 1651 aa17.81■□□□□ 0.44
CCHCR1-219ENST00000505392 FNBP4Q8N3X1 1017 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-219ENST00000505392 ORAI2Q96SN7 254 aa17.81■□□□□ 0.44
CCHCR1-219ENST00000505392 UNC13BO14795 1591 aa17.8■□□□□ 0.44
CCHCR1-219ENST00000505392 ADGRL3Q9HAR2 1447 aa17.8■□□□□ 0.44
CCHCR1-219ENST00000505392 NHSL1Q5SYE7 1610 aa17.8■□□□□ 0.44
CCHCR1-219ENST00000505392 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
CCHCR1-219ENST00000505392 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
CCHCR1-219ENST00000505392 ITGAEP38570 1179 aa17.77■□□□□ 0.44
CCHCR1-219ENST00000505392 CCDC125Q86Z20 511 aa17.77■□□□□ 0.44
CCHCR1-219ENST00000505392 XRN1Q8IZH2 1706 aaKnown RBP17.76■□□□□ 0.43
CCHCR1-219ENST00000505392 SETBP1Q9Y6X0 1596 aa17.76■□□□□ 0.43
CCHCR1-219ENST00000505392 ROCK1Q13464 1354 aa17.76■□□□□ 0.43
CCHCR1-219ENST00000505392 NRXN3Q9Y4C0 1643 aa17.75■□□□□ 0.43
CCHCR1-219ENST00000505392 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
CCHCR1-219ENST00000505392 IQGAP3Q86VI3 1631 aa17.72■□□□□ 0.43
CCHCR1-219ENST00000505392 ATRNO75882 1429 aa17.72■□□□□ 0.43
CCHCR1-219ENST00000505392 GJD4Q96KN9 370 aaPredicted RBP17.71■□□□□ 0.43
CCHCR1-219ENST00000505392 ESCO1Q5FWF5 840 aa17.7■□□□□ 0.42
CCHCR1-219ENST00000505392 ROBO2Q9HCK4 1378 aa17.69■□□□□ 0.42
CCHCR1-219ENST00000505392 VGFO15240 615 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-219ENST00000505392 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
CCHCR1-219ENST00000505392 FOXO3O43524 673 aa17.67■□□□□ 0.42
CCHCR1-219ENST00000505392 XPCQ01831 940 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-219ENST00000505392 NPHP3Q7Z494 1330 aa17.67■□□□□ 0.42
CCHCR1-219ENST00000505392 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
CCHCR1-219ENST00000505392 EP400Q96L91 3159 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms