RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 RGL3Q3MIN7 710 aa34.41■■■■□ 3.1
DHFR-203ENST00000505337 ROCK2O75116 1388 aaKnown RBP34.41■■■■□ 3.1
DHFR-203ENST00000505337 CARD11Q9BXL7 1154 aa34.4■■■■□ 3.1
DHFR-203ENST00000505337 TNRQ92752 1358 aa34.39■■■■□ 3.1
DHFR-203ENST00000505337 UGGT1Q9NYU2 1555 aa34.38■■■■□ 3.09
DHFR-203ENST00000505337 ZNF142P52746 1687 aaPredicted RBP34.38■■■■□ 3.09
DHFR-203ENST00000505337 CCER2I3L3R5 266 aa34.37■■■■□ 3.09
DHFR-203ENST00000505337 CEP170BQ9Y4F5 1589 aaPredicted RBP34.36■■■■□ 3.09
DHFR-203ENST00000505337 STRCQ7RTU9 1775 aa34.36■■■■□ 3.09
DHFR-203ENST00000505337 KIAA1210Q9ULL0 1709 aa34.34■■■■□ 3.09
DHFR-203ENST00000505337 ARHGAP31Q2M1Z3 1444 aa34.34■■■■□ 3.09
DHFR-203ENST00000505337 CFAP65Q6ZU64 1925 aaKnown RBP34.33■■■■□ 3.09
DHFR-203ENST00000505337 SPATA31D1Q6ZQQ2 1576 aa34.33■■■■□ 3.09
DHFR-203ENST00000505337 IQGAP1P46940 1657 aa34.32■■■■□ 3.08
DHFR-203ENST00000505337 A2ML1A8K2U0 1454 aa34.32■■■■□ 3.08
DHFR-203ENST00000505337 ERVK-7P63135 1459 aa34.32■■■■□ 3.08
DHFR-203ENST00000505337 ADGRB3O60242 1522 aa34.29■■■■□ 3.08
DHFR-203ENST00000505337 SCAF1Q9H7N4 1312 aaKnown RBP34.28■■■■□ 3.08
DHFR-203ENST00000505337 MYOM2P54296 1465 aa34.26■■■■□ 3.07
DHFR-203ENST00000505337 PIK3C2BO00750 1634 aa34.25■■■■□ 3.07
DHFR-203ENST00000505337 NLRP1Q9C000 1473 aa34.25■■■■□ 3.07
DHFR-203ENST00000505337 STAC3Q96MF2 364 aa34.24■■■■□ 3.07
DHFR-203ENST00000505337 PPLO60437 1756 aa34.22■■■■□ 3.07
DHFR-203ENST00000505337 NBPF1Q3BBV0 1214 aa34.21■■■■□ 3.07
DHFR-203ENST00000505337 ST20-MTHFSA0A0A6YYL1 179 aa34.2■■■■□ 3.07
DHFR-203ENST00000505337 DMRT2Q9Y5R5 561 aa34.19■■■■□ 3.06
DHFR-203ENST00000505337 SYNMO15061 1565 aa34.19■■■■□ 3.06
DHFR-203ENST00000505337 NOS1P29475 1434 aa34.17■■■■□ 3.06
DHFR-203ENST00000505337 NCKAP5LQ9HCH0 1330 aa34.17■■■■□ 3.06
DHFR-203ENST00000505337 NRXN1Q9ULB1 1477 aa34.14■■■■□ 3.06
DHFR-203ENST00000505337 THEMISQ8N1K5 641 aaPredicted RBP34.1■■■■□ 3.05
DHFR-203ENST00000505337 PRKRIP1Q9H875 184 aaPredicted RBP34.06■■■■□ 3.04
DHFR-203ENST00000505337 SCAF11Q99590 1463 aaKnown RBP34.04■■■■□ 3.04
DHFR-203ENST00000505337 UBR1Q8IWV7 1749 aa34.04■■■■□ 3.04
DHFR-203ENST00000505337 IDI1Q13907 227 aa34.02■■■■□ 3.04
DHFR-203ENST00000505337 TESK2Q96S53 571 aa34.01■■■■□ 3.04
DHFR-203ENST00000505337 MYO5BQ9ULV0 1848 aa34.01■■■■□ 3.03
DHFR-203ENST00000505337 SETBP1Q9Y6X0 1596 aa34■■■■□ 3.03
DHFR-203ENST00000505337 ANKLE2Q86XL3 938 aa33.99■■■■□ 3.03
DHFR-203ENST00000505337 GTF3C3Q9Y5Q9 886 aa33.99■■■■□ 3.03
DHFR-203ENST00000505337 DISP3Q9P2K9 1392 aa33.97■■■■□ 3.03
DHFR-203ENST00000505337 POLR3GLQ9BT43 218 aa33.96■■■■□ 3.03
DHFR-203ENST00000505337 SLC52A1Q9NWF4 448 aa33.96■■■■□ 3.03
DHFR-203ENST00000505337 NEXMIFQ5QGS0 1516 aa33.95■■■■□ 3.03
DHFR-203ENST00000505337 ADGRF5Q8IZF2 1346 aa33.94■■■■□ 3.02
DHFR-203ENST00000505337 PIK3C2GO75747 1445 aa33.93■■■■□ 3.02
DHFR-203ENST00000505337 ARHGAP23Q9P227 1491 aa33.92■■■■□ 3.02
DHFR-203ENST00000505337 TMEM131LA2VDJ0 1609 aa33.91■■■■□ 3.02
DHFR-203ENST00000505337 MED14O60244 1454 aa33.91■■■■□ 3.02
DHFR-203ENST00000505337 SLIT1O75093 1534 aa33.91■■■■□ 3.02
DHFR-203ENST00000505337 KDM5AP29375 1690 aaKnown RBP33.9■■■■□ 3.02
DHFR-203ENST00000505337 STAG3Q9UJ98 1225 aa33.89■■■■□ 3.02
DHFR-203ENST00000505337 EIF3AQ14152 1382 aaKnown RBP33.88■■■■□ 3.01
DHFR-203ENST00000505337 RPGRIP1LQ68CZ1 1315 aa33.88■■■■□ 3.01
DHFR-203ENST00000505337 LTKP29376 864 aa33.87■■■■□ 3.01
DHFR-203ENST00000505337 CERKQ8TCT0 537 aa33.87■■■■□ 3.01
DHFR-203ENST00000505337 LTBP4Q8N2S1 1624 aa33.87■■■■□ 3.01
DHFR-203ENST00000505337 TMEM2Q9UHN6 1383 aa33.86■■■■□ 3.01
DHFR-203ENST00000505337 MYOM1P52179 1685 aa33.86■■■■□ 3.01
DHFR-203ENST00000505337 NPHP4O75161 1426 aaPredicted RBP33.86■■■■□ 3.01
DHFR-203ENST00000505337 ADGRB1O14514 1584 aa33.85■■■■□ 3.01
DHFR-203ENST00000505337 ZNF335Q9H4Z2 1342 aaPredicted RBP33.85■■■■□ 3.01
DHFR-203ENST00000505337 TMF1P82094 1093 aa33.84■■■■□ 3.01
DHFR-203ENST00000505337 ILDR1Q86SU0 546 aaPredicted RBP33.83■■■■□ 3.01
DHFR-203ENST00000505337 CHGAP10645 457 aaKnown RBP33.82■■■■□ 3
DHFR-203ENST00000505337 CCDC184Q52MB2 194 aa33.82■■■■□ 3
DHFR-203ENST00000505337 TXNDC2Q86VQ3 553 aa33.82■■■■□ 3
DHFR-203ENST00000505337 CFAP70Q5T0N1 1121 aa33.82■■■■□ 3
DHFR-203ENST00000505337 KTN1Q86UP2 1357 aaKnown RBP33.79■■■■□ 3
DHFR-203ENST00000505337 EID1Q9Y6B2 187 aa33.77■■■■□ 3
DHFR-203ENST00000505337 QRICH2Q9H0J4 1663 aa33.76■■■■□ 3
DHFR-203ENST00000505337 ZFYVE9O95405 1425 aa33.75■■■□□ 2.99
DHFR-203ENST00000505337 FBXO41Q8TF61 875 aa33.75■■■□□ 2.99
DHFR-203ENST00000505337 ARHGEF28Q8N1W1 1705 aaKnown RBP33.73■■■□□ 2.99
DHFR-203ENST00000505337 MRS2Q9HD23 443 aa33.73■■■□□ 2.99
DHFR-203ENST00000505337 SBNO2Q9Y2G9 1366 aa33.71■■■□□ 2.99
DHFR-203ENST00000505337 C14orf93Q9H972 538 aaKnown RBP33.7■■■□□ 2.99
DHFR-203ENST00000505337 PER1O15534 1290 aaPredicted RBP33.67■■■□□ 2.98
DHFR-203ENST00000505337 PARD3Q8TEW0 1356 aa33.66■■■□□ 2.98
DHFR-203ENST00000505337 RIMS2Q9UQ26 1411 aa33.65■■■□□ 2.98
DHFR-203ENST00000505337 CDCA8Q53HL2 280 aa33.64■■■□□ 2.98
DHFR-203ENST00000505337 ASXL1Q8IXJ9 1541 aa33.64■■■□□ 2.98
DHFR-203ENST00000505337 VGFO15240 615 aaPredicted RBP33.63■■■□□ 2.97
DHFR-203ENST00000505337 RALBP1Q15311 655 aa33.63■■■□□ 2.97
DHFR-203ENST00000505337 IQSEC2Q5JU85 1478 aa33.61■■■□□ 2.97
DHFR-203ENST00000505337 SLC24A1O60721 1099 aa33.6■■■□□ 2.97
DHFR-203ENST00000505337 HNRNPUQ00839 825 aaKnown RBP eCLIP33.59■■■□□ 2.976e-6■■■■□ 19.8
DHFR-203ENST00000505337 MYBBP1AQ9BQG0 1328 aaKnown RBP33.59■■■□□ 2.97
DHFR-203ENST00000505337 CPS1P31327 1500 aa33.59■■■□□ 2.97
DHFR-203ENST00000505337 STRCP1A6NGW2 1772 aa33.58■■■□□ 2.97
DHFR-203ENST00000505337 PANK3Q9H999 370 aa33.58■■■□□ 2.97
DHFR-203ENST00000505337 HDGFP51858 240 aaKnown RBP33.57■■■□□ 2.96
DHFR-203ENST00000505337 BRD4O60885 1362 aaPredicted RBP33.57■■■□□ 2.96
DHFR-203ENST00000505337 NUTM2DQ5VT03 806 aaPredicted RBP33.56■■■□□ 2.96
DHFR-203ENST00000505337 PLEKHG1Q9ULL1 1385 aa33.56■■■□□ 2.96
DHFR-203ENST00000505337 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.55■■■□□ 2.96
DHFR-203ENST00000505337 SLC26A8Q96RN1 970 aa33.55■■■□□ 2.96
DHFR-203ENST00000505337 SETD1AO15047 1707 aaKnown RBP33.54■■■□□ 2.96
DHFR-203ENST00000505337 CENPJQ9HC77 1338 aaPredicted RBP33.54■■■□□ 2.96
DHFR-203ENST00000505337 CNGB1Q14028 1251 aaPredicted RBP33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms