RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ADAMTS19Q8TE59 1207 aa5.45□□□□□ -1.54
HMGB1P22-201ENST00000505315 SPIRE2Q8WWL2 714 aa5.45□□□□□ -1.54
HMGB1P22-201ENST00000505315 NPDC1Q9NQX5 325 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P22-201ENST00000505315 TFIP11Q9UBB9 837 aaKnown RBP5.45□□□□□ -1.54
HMGB1P22-201ENST00000505315 EN1Q05925 392 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P22-201ENST00000505315 BCL2L13Q9BXK5 485 aa5.44□□□□□ -1.54
HMGB1P22-201ENST00000505315 TRPC6Q9Y210 931 aa5.44□□□□□ -1.54
HMGB1P22-201ENST00000505315 TSC1Q92574 1164 aa5.43□□□□□ -1.54
HMGB1P22-201ENST00000505315 EPAS1Q99814 870 aa5.43□□□□□ -1.54
HMGB1P22-201ENST00000505315 TMEM88BA6NKF7 163 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 SPTLC1O15269 473 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 ATG7O95352 703 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 SRPK2P78362 688 aaKnown RBP5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 SEMA3FQ13275 785 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 QPCTQ16769 361 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 TSR1Q2NL82 804 aaKnown RBP5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 RTL5Q5HYW3 569 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 RSBN1LQ6PCB5 846 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 PADI6Q6TGC4 694 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 PXYLP1Q8TE99 480 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 DRC1Q96MC2 740 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 BIN2Q9UBW5 565 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 GNEQ9Y223 722 aaKnown RBP5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 BOLA1Q9Y3E2 137 aa5.42□□□□□ -1.54
HMGB1P22-201ENST00000505315 MOXD2PA6NHM9 499 aa5.41□□□□□ -1.54
HMGB1P22-201ENST00000505315 TCF3P15923 654 aa5.41□□□□□ -1.54
HMGB1P22-201ENST00000505315 ERCC3P19447 782 aa5.41□□□□□ -1.54
HMGB1P22-201ENST00000505315 CCDC125Q86Z20 511 aa5.41□□□□□ -1.54
HMGB1P22-201ENST00000505315 CABLES1Q8TDN4 633 aa5.41□□□□□ -1.54
HMGB1P22-201ENST00000505315 GIPC2Q8TF65 315 aa5.41□□□□□ -1.54
HMGB1P22-201ENST00000505315 KIAA1522Q9P206 1035 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P22-201ENST00000505315 SOCS7O14512 581 aa5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 SMARCA5O60264 1052 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 PHF14O94880 888 aa5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 CD44P16070 742 aaKnown RBP5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 ZNF16P17020 682 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 NDUFV2P19404 249 aa5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 CANXP27824 592 aaKnown RBP5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 RBM46Q8TBY0 533 aaKnown RBP5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 SIRT1Q96EB6 747 aa5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 MS4A3Q96HJ5 214 aa5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 ADGRG1Q9Y653 693 aa5.4□□□□□ -1.54
HMGB1P22-201ENST00000505315 TTLL13PA6NNM8 815 aa5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 KIF3CO14782 793 aa5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 LILRB3O75022 631 aa5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 ARID4AP29374 1257 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 ZNF326Q5BKZ1 582 aaKnown RBP5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 SLAIN1Q8ND83 568 aa5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 SREK1Q8WXA9 508 aaKnown RBP5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 IGSF5Q9NSI5 407 aa5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 TRIM35Q9UPQ4 493 aa5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 PCDHB15Q9Y5E8 787 aa5.39□□□□□ -1.55
HMGB1P22-201ENST00000505315 DDX11L8A8MPP1 907 aa5.38□□□□□ -1.55
HMGB1P22-201ENST00000505315 MARSP56192 900 aaKnown RBP5.38□□□□□ -1.55
HMGB1P22-201ENST00000505315 TUSC1Q2TAM9 212 aa5.38□□□□□ -1.55
HMGB1P22-201ENST00000505315 ILDR1Q86SU0 546 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P22-201ENST00000505315 BCL11AQ9H165 835 aa5.38□□□□□ -1.55
HMGB1P22-201ENST00000505315 ALG2Q9H553 416 aa5.38□□□□□ -1.55
HMGB1P22-201ENST00000505315 MAFBQ9Y5Q3 323 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P22-201ENST00000505315 TIE1P35590 1138 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 TYW1BQ6NUM6 668 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 TBC1D9Q6ZT07 1266 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 TXNDC2Q86VQ3 553 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 SULF1Q8IWU6 871 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 PNMA1Q8ND90 353 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 PRR7Q8TB68 274 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 L3MBTL3Q96JM7 780 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 GJD4Q96KN9 370 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 UCN2Q96RP3 112 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 ZBTB3Q9H5J0 574 aa5.37□□□□□ -1.55
HMGB1P22-201ENST00000505315 NCLP19338 710 aaKnown RBP5.36□□□□□ -1.55
HMGB1P22-201ENST00000505315 SOX11P35716 441 aa5.36□□□□□ -1.55
HMGB1P22-201ENST00000505315 CTDSPL2Q05D32 466 aa5.36□□□□□ -1.55
HMGB1P22-201ENST00000505315 HELBQ8NG08 1087 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P22-201ENST00000505315 CERKQ8TCT0 537 aa5.36□□□□□ -1.55
HMGB1P22-201ENST00000505315 HMX1Q9NP08 348 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P22-201ENST00000505315 CD46P15529 392 aa5.35□□□□□ -1.55
HMGB1P22-201ENST00000505315 TMEM164Q5U3C3 297 aa5.35□□□□□ -1.55
HMGB1P22-201ENST00000505315 DNAJC14Q6Y2X3 702 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P22-201ENST00000505315 RDH13Q8NBN7 331 aa5.35□□□□□ -1.55
HMGB1P22-201ENST00000505315 NOVA2Q9UNW9 492 aaKnown RBP5.35□□□□□ -1.55
HMGB1P22-201ENST00000505315 PCDHGA10Q9Y5H3 936 aa5.35□□□□□ -1.55
HMGB1P22-201ENST00000505315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.34□□□□□ -1.55
HMGB1P22-201ENST00000505315 ANKRD33BA6NCL7 494 aa5.34□□□□□ -1.55
HMGB1P22-201ENST00000505315 ATP9BO43861 1147 aa5.34□□□□□ -1.55
HMGB1P22-201ENST00000505315 ZC3H6P61129 1189 aaKnown RBP5.34□□□□□ -1.55
HMGB1P22-201ENST00000505315 EIF4G2P78344 907 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P22-201ENST00000505315 STK32AQ8WU08 396 aa5.34□□□□□ -1.55
HMGB1P22-201ENST00000505315 SPATA32Q96LK8 384 aa5.34□□□□□ -1.55
HMGB1P22-201ENST00000505315 ARID4BQ4LE39 1312 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 RCCD1A6NED2 376 aa5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 SOWAHDA6NJG2 315 aa5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 SERPINB4P48594 390 aa5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 SF3A1Q15459 793 aaKnown RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 PRPF38BQ5VTL8 546 aaKnown RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 PDCD7Q8N8D1 485 aaKnown RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 LRRN4Q8WUT4 740 aa5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 UBXN4Q92575 508 aa5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 TMEM121BQ9BXQ6 578 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P22-201ENST00000505315 TRIM34Q9BYJ4 488 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms