RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ANO8Q9HCE9 1232 aaPredicted RBP15.56■□□□□ 0.08
UBE3D-206ENST00000505226 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
UBE3D-206ENST00000505226 NFKBIBQ15653 356 aa15.56■□□□□ 0.08
UBE3D-206ENST00000505226 MADDQ8WXG6 1647 aa15.55■□□□□ 0.08
UBE3D-206ENST00000505226 IQGAP1P46940 1657 aa15.55■□□□□ 0.08
UBE3D-206ENST00000505226 DUOX2Q9NRD8 1548 aa15.55■□□□□ 0.08
UBE3D-206ENST00000505226 TRMT2AQ8IZ69 625 aaKnown RBP15.55■□□□□ 0.08
UBE3D-206ENST00000505226 FAM161AQ3B820 660 aa15.54■□□□□ 0.08
UBE3D-206ENST00000505226 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
UBE3D-206ENST00000505226 BCAR3O75815 825 aa15.53■□□□□ 0.08
UBE3D-206ENST00000505226 RGS3P49796 1198 aa15.53■□□□□ 0.08
UBE3D-206ENST00000505226 APAF1O14727 1248 aa15.51■□□□□ 0.07
UBE3D-206ENST00000505226 ASXL1Q8IXJ9 1541 aa15.51■□□□□ 0.07
UBE3D-206ENST00000505226 MYOM1P52179 1685 aa15.51■□□□□ 0.07
UBE3D-206ENST00000505226 SYNMO15061 1565 aa15.5■□□□□ 0.07
UBE3D-206ENST00000505226 GSE1Q14687 1217 aa15.5■□□□□ 0.07
UBE3D-206ENST00000505226 BRPF3Q9ULD4 1205 aa15.5■□□□□ 0.07
UBE3D-206ENST00000505226 PIK3C2GO75747 1445 aa15.5■□□□□ 0.07
UBE3D-206ENST00000505226 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
UBE3D-206ENST00000505226 IGHDP01880 384 aa15.49■□□□□ 0.07
UBE3D-206ENST00000505226 SCAF11Q99590 1463 aaKnown RBP15.49■□□□□ 0.07
UBE3D-206ENST00000505226 TRAPPC8Q9Y2L5 1435 aa15.49■□□□□ 0.07
UBE3D-206ENST00000505226 FRAT1Q92837 279 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-206ENST00000505226 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
UBE3D-206ENST00000505226 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
UBE3D-206ENST00000505226 SPHKAPQ2M3C7 1700 aa15.46■□□□□ 0.07
UBE3D-206ENST00000505226 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
UBE3D-206ENST00000505226 CARD14Q9BXL6 1004 aa15.46■□□□□ 0.07
UBE3D-206ENST00000505226 FRAT2O75474 233 aaPredicted RBP15.46■□□□□ 0.06
UBE3D-206ENST00000505226 SCAPERQ9BY12 1400 aa15.46■□□□□ 0.06
UBE3D-206ENST00000505226 USP19O94966 1318 aa15.45■□□□□ 0.06
UBE3D-206ENST00000505226 CLTCL1P53675 1640 aa15.45■□□□□ 0.06
UBE3D-206ENST00000505226 EIF3AQ14152 1382 aaKnown RBP15.45■□□□□ 0.06
UBE3D-206ENST00000505226 PLCH2O75038 1416 aa15.45■□□□□ 0.06
UBE3D-206ENST00000505226 TRPM2O94759 1503 aa15.44■□□□□ 0.06
UBE3D-206ENST00000505226 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
UBE3D-206ENST00000505226 NPC1L1Q9UHC9 1359 aa15.44■□□□□ 0.06
UBE3D-206ENST00000505226 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
UBE3D-206ENST00000505226 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
UBE3D-206ENST00000505226 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
UBE3D-206ENST00000505226 SEC24BO95487 1268 aa15.43■□□□□ 0.06
UBE3D-206ENST00000505226 PTPRTO14522 1441 aa15.43■□□□□ 0.06
UBE3D-206ENST00000505226 CEP152O94986 1710 aa15.43■□□□□ 0.06
UBE3D-206ENST00000505226 SLC24A1O60721 1099 aa15.42■□□□□ 0.06
UBE3D-206ENST00000505226 ABCC1P33527 1531 aa15.42■□□□□ 0.06
UBE3D-206ENST00000505226 CFAP70Q5T0N1 1121 aa15.41■□□□□ 0.06
UBE3D-206ENST00000505226 EFCAB2Q5VUJ9 269 aa15.41■□□□□ 0.06
UBE3D-206ENST00000505226 E9PSI1 815 aa15.41■□□□□ 0.06
UBE3D-206ENST00000505226 PANK1Q8TE04 598 aa15.41■□□□□ 0.06
UBE3D-206ENST00000505226 CHD1O14646 1710 aa15.41■□□□□ 0.06
UBE3D-206ENST00000505226 ERVK-7P63135 1459 aa15.4■□□□□ 0.06
UBE3D-206ENST00000505226 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
UBE3D-206ENST00000505226 COG6Q9Y2V7 657 aa15.39■□□□□ 0.05
UBE3D-206ENST00000505226 KDM5AP29375 1690 aaKnown RBP15.39■□□□□ 0.05
UBE3D-206ENST00000505226 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
UBE3D-206ENST00000505226 ADGRF5Q8IZF2 1346 aa15.38■□□□□ 0.05
UBE3D-206ENST00000505226 WWC1Q8IX03 1113 aa15.38■□□□□ 0.05
UBE3D-206ENST00000505226 UGGT1Q9NYU2 1555 aa15.37■□□□□ 0.05
UBE3D-206ENST00000505226 TNNQ9UQP3 1299 aa15.36■□□□□ 0.05
UBE3D-206ENST00000505226 PDE3AQ14432 1141 aa15.36■□□□□ 0.05
UBE3D-206ENST00000505226 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
UBE3D-206ENST00000505226 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.36■□□□□ 0.05
UBE3D-206ENST00000505226 ZFYVE16Q7Z3T8 1539 aa15.36■□□□□ 0.05
UBE3D-206ENST00000505226 VIRMAQ69YN4 1812 aaKnown RBP15.36■□□□□ 0.05
UBE3D-206ENST00000505226 STAC3Q96MF2 364 aa15.35■□□□□ 0.05
UBE3D-206ENST00000505226 CENPJQ9HC77 1338 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-206ENST00000505226 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
UBE3D-206ENST00000505226 RRP7AQ9Y3A4 280 aaKnown RBP15.35■□□□□ 0.05
UBE3D-206ENST00000505226 ZCCHC11Q5TAX3 1644 aaKnown RBP15.35■□□□□ 0.05
UBE3D-206ENST00000505226 DEPDC5O75140 1603 aa15.34■□□□□ 0.05
UBE3D-206ENST00000505226 CGNL1Q0VF96 1302 aa15.34■□□□□ 0.05
UBE3D-206ENST00000505226 NEUROD2Q15784 382 aa15.34■□□□□ 0.05
UBE3D-206ENST00000505226 NLRP1Q9C000 1473 aa15.34■□□□□ 0.05
UBE3D-206ENST00000505226 ABCA6Q8N139 1617 aa15.34■□□□□ 0.05
UBE3D-206ENST00000505226 RLBP1P12271 317 aa15.34■□□□□ 0.05
UBE3D-206ENST00000505226 KIAA1210Q9ULL0 1709 aa15.33■□□□□ 0.05
UBE3D-206ENST00000505226 TET3O43151 1660 aa15.33■□□□□ 0.04
UBE3D-206ENST00000505226 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
UBE3D-206ENST00000505226 PCDHB15Q9Y5E8 787 aa15.32■□□□□ 0.04
UBE3D-206ENST00000505226 RTEL1-TNFRSF6BF6WH68 1400 aa15.32■□□□□ 0.04
UBE3D-206ENST00000505226 POLR3AO14802 1390 aaPredicted RBP15.32■□□□□ 0.04
UBE3D-206ENST00000505226 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
UBE3D-206ENST00000505226 RARSP54136 660 aaKnown RBP15.31■□□□□ 0.04
UBE3D-206ENST00000505226 SHPRHQ149N8 1683 aa15.31■□□□□ 0.04
UBE3D-206ENST00000505226 KIF3BO15066 747 aa15.31■□□□□ 0.04
UBE3D-206ENST00000505226 VWDEQ8N2E2 1590 aa15.31■□□□□ 0.04
UBE3D-206ENST00000505226 CANXP27824 592 aaKnown RBP15.3■□□□□ 0.04
UBE3D-206ENST00000505226 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
UBE3D-206ENST00000505226 POGKQ9P215 609 aa15.3■□□□□ 0.04
UBE3D-206ENST00000505226 SLC12A5Q9H2X9 1139 aa15.29■□□□□ 0.04
UBE3D-206ENST00000505226 MAPK8IP3Q9UPT6 1336 aa15.28■□□□□ 0.04
UBE3D-206ENST00000505226 TCP11L2Q8N4U5 519 aa15.28■□□□□ 0.04
UBE3D-206ENST00000505226 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
UBE3D-206ENST00000505226 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-206ENST00000505226 SLKQ9H2G2 1235 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-206ENST00000505226 MYOM2P54296 1465 aa15.27■□□□□ 0.04
UBE3D-206ENST00000505226 NSD3Q9BZ95 1437 aa15.27■□□□□ 0.04
UBE3D-206ENST00000505226 ANTXR1Q9H6X2 564 aa15.27■□□□□ 0.03
UBE3D-206ENST00000505226 MROH1Q8NDA8 1641 aa15.27■□□□□ 0.03
UBE3D-206ENST00000505226 IQSEC2Q5JU85 1478 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms